Oryzias latipes (Japanese medaka): 101158765
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Entry
101158765 CDS
T02443
Name
(RefSeq) laminin subunit beta-2
KO
K06243
laminin, beta 2
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04510
Focal adhesion
ola04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101158765
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101158765
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
PKcGMP_CC
Tropomyosin
Motif
Other DBs
NCBI-GeneID:
101158765
NCBI-ProteinID:
XP_011475073
UniProt:
H2L8F5
LinkDB
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Position
7:complement(4319091..4376609)
Genome browser
AA seq
1840 aa
AA seq
DB search
MTIMIPTLSLLIFALNAAGQELPSSPHGCTEGSCYPATGNLLIGRAVNLTATSTCGLNGP
EQYCIVSHLQELDKCFECDSQRPYHPLRHRNSHRIENVIYLSDRSGELTWWQSASGKEDV
SLRLNLEAEFHFTHLIMKFKTFRPAAMIIERSADFGRTWRPYRYFASNCTRTFPGVPAKG
LHHINDVICEERYSDIEPSTNGEVIFKVLDPSIPVKDPYSLEIQELLRITNLRINFTKLN
TLGDDLLDRRTDVLQKYYYAIYELVVRGSCFCYGHASECAPVPGVFTRESGMIHGRCVCK
HNTEGLNCERCKDFHKDLPWRPAEAENPHTCKECNCNGHSNQCHFDMAVYLATGNVSGGV
CDNCLHNTVGRNCEMCQPFYYQDPNRDVRDPQVCLLCDCDPVGSFDGGVCDSHTDLDMGM
IAGQCRCKANVKGIRCDDCKVGYYGLSQNDPQGCQPCNCDPRGIIRMGDPCDQISGDCSC
KRYVTGRYCDQCLPEYWGLSNDQFGCRPCDCDFGGALNNRCMMESGQCDCRRHLIGRQCS
EVQSGYFCAPLDYYKYEAEDASGHSPNDPALPGKVRPQAADDCIQHLSNQARRHRRHRRV
SSSQQYHTALRRIRQLQQTPDVTTLNREHTPGLVVTWTGPGFARVKDGAGLVFTIDNIPH
AMEYHIMLRYEPESTEDWEAVVSITSVNLPSSLRCGNLLPTEQLYTETLLHRNRYIQMSR
PFCFEPNNRYVVAIRFQRHGVTHRHLTAFILIDSLILIPKYTELPGFQGSGLQAEQNRED
MVRYMCLDFFMITPMPLLAEMCSKLICSISSIIHDGALACQCDPQGSLSSECNQVGGQCR
CKPNVMGRRCDQCAPGTYGFGVSGCTACNCHPDGSSSHQCDPLTGQCPCRQGAIGRQCSD
CQPGQWGFPSCRRCQCNGHADLCDPQTGECRDCRDNAAGHQCERCKNGFYGNPVLGSGEH
CQPCPCPGNPGSNHFNGHSCQSDYSANQIICNCNQGYTGSRCDQCAPGYYGNPEQPGGQC
LPCQCNNNIDPNDPESCDPRTGRCLRCLYHTHGQFCSECEPGYHGNAIAQECRRCTCVTA
GTLQSACHDGLCHCDPESGACPCRENVRGRVCDQCAPNHWNFGEERGCEPCDCDPQNSLG
THCNMFTGQCHCRPGFGGKTCTECEQFYWGDPQVECRECNCHVHGSNLRVCDRTTGQCDC
QEGKAGQKCDECARGFTGAFPNCVRCHQCFQLWDDIICQIKRDLDHIHFTAQRILESGVM
PGVGDARIRELEEKLKQVKDLIGSGRNESIHQLIGQAIDDIRAEIAVTDGRLMAISQEIN
TTAGEERFLQRTLSIMEDELRDLNYTVANMQLYHLPVGFADQFEKLKKDYQKSLQAEEKC
NASVSGPFSPVEQSNKTRRITEELLEATKDEFLKAVEANNQSLNELQQEALKLGETVQDL
SQKVCGGHSSVSVNGSCPDSQCGGAGCRDDRGDLICGGEGCNGTVGSARAALNQSVNTIQ
SLMAANEELQNISRKLQEIASLTQDVKNQTMKTLEKAQEKKKHFEDNNKNLKDFIKMIKD
FLTGEGADPESIEKVALQVLSITLPFNRTTLDKITTEIRDSLSNLTNVEAILNQTADTVN
KAKELLSKAKDAKAQAEGVKDAANSTKQALEASEKAIEKATTALKEAQSNLNNTQNATAE
VESQLLLLERKQMDIVMRLQNLSAEAEALRNKTEMNRRMADDALALANNATLRASSLEQS
LNDTEEQYQELLRKVDSLGGESGSLDTISQKVRMMKSDAEDLFNKAKDGIKELEELTNTF
KDNEDRMQKQLVELEDLKQNATDVRDELRRKMQTFSSCQV
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcatgatcccaacgctaagcctcctcatatttgctctgaatgcagccggacaa
gagcttccatcgagccctcacggctgcacggaaggaagctgttaccccgcaacaggaaac
ctcctgattgggcgagctgtcaacctaaccgccacttccacatgcggcctaaacggaccc
gagcagtactgcattgtcagccacctgcaggagctggacaagtgctttgagtgtgactcg
cagcgtccgtaccaccctcttcgacacagaaacagccaccgtatcgaaaatgtgatctac
ctgagtgatcgcagcggagagctcacctggtggcagtctgccagcggtaaggaggatgtc
agcctgagactgaatctggaggctgagttccacttcacacatcttatcatgaagtttaag
actttccgacctgcagcgatgatcatcgagcgctcggcagattttggcagaacgtggcga
ccctaccgctactttgcctccaactgcaccagaactttccccggcgtacccgccaaaggc
ttgcaccacattaacgacgtgatctgcgaggagcgctactccgacatcgaaccgtccact
aacggggaggtcatttttaaagttttggatccatcaattcctgtgaaagacccttacagc
ttggaaattcaagaacttttgcgcatcaccaacctgcgtatcaacttcacaaagctcaac
accttgggagacgacctgctggaccgtcgcactgatgtcctgcaaaagtattactacgcc
atctacgagctggtggtcagggggagctgcttctgctacggacatgcatcagagtgtgcc
ccggtgccgggagtcttcacccgggagagcggcatgatccacggtcgctgcgtttgcaaa
cacaacacggaagggctgaactgtgagcgctgcaaggacttccacaaagacctgccgtgg
agaccagcagaggcagagaaccctcacacctgcaaagagtgtaactgcaacggtcattcc
aaccagtgccactttgacatggctgtgtacctggccacgggcaacgtcagcggaggcgtt
tgtgacaattgtctacacaacacagttgggcgcaactgtgagatgtgtcaaccattctac
tatcaagaccccaacagggacgtcagagacccacaagtttgtcttttgtgtgattgtgac
ccggtggggtcattcgatggcggcgtgtgtgacagccacaccgacttggacatggggatg
atcgcaggccagtgtcgctgtaaagccaacgtgaaaggcatacgctgcgacgactgcaaa
gtgggttactacggactcagccagaacgacccacagggatgccagccttgcaactgtgac
ccgcgtggcatcattaggatgggagatccatgtgaccagatcagcggggactgttcctgc
aaacgatacgtcaccggacgttactgtgaccagtgtctgcctgaatactgggggctcagt
aacgaccagtttggatgcagaccctgtgactgcgactttggtggagccctcaacaacagg
tgcatgatggaaagtggccagtgtgactgcagaaggcatctaattggtcgccagtgttca
gaagtgcagtctgggtatttctgcgctcctctcgactattacaaatacgaggcagaggat
gctagcggtcactctcccaatgaccctgccctgccgggaaaagttcgtcctcaggccgca
gacgactgcattcagcatctgagcaaccaggcgaggaggcatcggcgccacagacgggtc
tccagctcgcagcagtaccacaccgcgctgagacgcatccggcagcttcagcagacaccc
gatgtgacgactctgaacagagagcacactcccggcctcgtggtgacctggactggaccc
ggctttgctcgcgtcaaagatggcgccggtttggttttcacaatcgacaacatccctcat
gccatggagtaccacatcatgcttcgctacgagcctgagtcaacagaggactgggaggct
gtcgtcagtattacctccgtaaacctgccctcgagtctgcgatgcggaaaccttcttcca
accgagcagctctacacggagactctgctgcacagaaacagatacatccagatgtccaga
cccttttgctttgagcccaacaacagatatgtggtggcgatcaggttccagcgacatgga
gtcacgcacagacacctgactgccttcatcctcatcgactcgctcattttgattcccaaa
tacaccgaacttcctggctttcaaggcagtgggcttcaggcggagcagaaccgagaagac
atggtccgctacatgtgtttggatttcttcatgatcactccgatgcccctcctggctgag
atgtgctccaaactcatctgcagcatctcatccatcatccatgatggagcgctggcctgt
cagtgtgaccctcagggctccctcagcagcgagtgcaaccaagtcggaggccagtgtcgc
tgcaagcccaatgtgatggggcggcgctgtgatcagtgcgccccggggacgtacggcttt
ggagtaagcggctgcaccgcttgtaattgccaccctgatggctcttcgagtcaccagtgt
gacccgctcacggggcagtgcccctgcaggcagggcgccatcgggcgccagtgctccgac
tgccaaccaggccagtggggtttccccagctgcaggcgctgtcagtgcaacggccacgca
gacctctgtgacccccaaacaggagaatgcagagactgtcgggacaacgccgcaggacac
cagtgtgaacggtgtaagaacggcttctatggaaacccggtgctcggctctggagaacac
tgtcagccctgcccctgccccggaaacccgggatcaaatcactttaacggacattcctgc
caatctgactactctgctaatcagattatatgtaactgtaatcaaggctacactggttcc
cgctgtgaccagtgtgcacctggttactacggcaaccccgagcaacctggaggtcagtgt
ctgccgtgccagtgcaacaacaacattgaccccaacgaccccgagtcatgtgaccccagg
actggccggtgcctcaggtgtctgtaccacacccacgggcagttctgctccgagtgtgag
cctggttaccatggaaacgccattgcccaggaatgcagacgctgcacctgtgtaactgct
ggaaccctgcagtctgcgtgccacgatggactctgtcactgtgacccggagagcggcgcc
tgcccctgcagggagaacgtccgtggccgcgtctgcgaccagtgcgctccaaaccattgg
aacttcggcgaggagagaggctgcgagccgtgcgactgcgacccgcagaactccctggga
acacactgcaacatgttcacaggccagtgccactgccgtccaggttttggaggaaaaacg
tgcaccgagtgtgagcagttctactggggggacccacaggtggagtgtcgagagtgtaac
tgccacgtgcacggctctaacttgcgtgtgtgtgaccggacaaccggacagtgcgattgt
caagagggaaaggcggggcagaagtgcgacgagtgcgcccgcggcttcaccggcgcgttt
cccaactgcgttcggtgtcaccagtgcttccagctgtgggacgacatcatctgccaaatc
aagagggacctggaccacatccacttcacggcgcagagaatcctggagagcggggtcatg
ccgggagttggggacgctcgcatccgggagctggaggagaagctgaagcaggtgaaggat
ctgatcgggtcaggcaggaatgagagcatccatcagctgattgggcaggccattgacgac
atcagggctgagatcgctgtcactgatggacgtctgatggccatcagtcaggagattaat
acaactgctggggaggaacggttcctccaacgcacgctaagtatcatggaggatgagctg
agggacctcaactacaccgtggctaacatgcaactctaccacctacccgtaggatttgca
gatcagtttgagaagctaaagaaggactatcagaagtcgctgcaggctgaggagaaatgc
aacgcttcggtgtcgggaccttttagtcctgtggaacaatccaacaaaacccgaaggatc
acagaggagctgctggaggctacgaaagacgaattcctgaaggccgtggaagctaacaac
cagtccttgaatgagctccagcaagaagctctcaaacttggcgagacggtccaggacctc
agccagaaggtgtgcggcggtcacagcagcgtcagtgtcaatggcagctgtccggacagc
cagtgcggtggagcggggtgccgcgatgatcggggtgacctcatatgtggaggcgaaggc
tgcaacgggacggtgggcagcgcccgggcagcactgaaccagtctgtaaacaccatccag
agtctgatggctgcaaacgaagagctgcagaacatctccaggaagctccaggaaattgcc
agtctgactcaagatgtgaagaaccagacgatgaaaacgctggagaaagcccaggagaag
aagaaacactttgaagacaacaacaagaatctcaaagacttcattaagatgataaaagac
ttcctaaccggggagggcgctgatccggagagcatagagaaggtggccctgcaggtgctg
tcgatcacgctgccgttcaacagaaccactctggataaaatcaccacagagatcagggac
agcctctccaacctcaccaacgtcgaggccattttgaatcagaccgctgacaccgtcaac
aaggccaaggagctgctcagcaaagctaaggatgcaaaagctcaagccgagggagtgaag
gatgcagccaacagcaccaagcaggcattggaagcgtctgagaaagccattgaaaaggca
accacagccctgaaggaggcacagagcaacctgaacaacacccagaacgccacagcagag
gtggagtcacagctgttgctgctagagaggaaacagatggacatagtgatgcgtttgcag
aacctctcagccgaggcagaagctctgaggaacaagacggagatgaacagaaggatggca
gacgacgctctagccctggcaaacaacgccaccctcagggcttcatcattggagcagagc
ctcaacgacacggaggaacagtaccaggagctgctgcggaaagtggattcccttggtggc
gagtctgggagcctggacaccatcagccagaaggttcgaatgatgaagagcgacgcagaa
gatctcttcaacaaggcaaaggatggcataaaggaactggaggagctgacgaacacattc
aaggacaacgaggacaggatgcagaaacagctggtggagctggaagatctgaaacaaaac
gccaccgacgtgcgggatgagctgaggaggaaaatgcagacgtttagtagctgccaagta
tga
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