Oryzias latipes (Japanese medaka): 101158795
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Entry
101158795 CDS
T02443
Symbol
vars
Name
(RefSeq) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
101158795 (vars)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ola01007
]
101158795 (vars)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ola03016
]
101158795 (vars)
Enzymes [BR:
ola01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
101158795 (vars)
Amino acid related enzymes [BR:
ola01007
]
Aminoacyl-tRNA synthetase
Class I (U)
101158795 (vars)
Transfer RNA biogenesis [BR:
ola03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
101158795 (vars)
Prokaryotic type
101158795 (vars)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
GST_C
tRNA-synt_1_2
Val_tRNA-synt_C
GST_C_2
Arc1p_N_like
tRNA-synt_1e
GST_C_3
FAM199X
KIF21A
Motif
Other DBs
NCBI-GeneID:
101158795
NCBI-ProteinID:
XP_004078049
UniProt:
H2MCT7
LinkDB
All DBs
Position
16:20768915..20787873
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AA seq
1284 aa
AA seq
DB search
MATLYVSPHPDHFRSLLALIAAEFSPSSRPQIITEDPPSSLNVHSRPALRLGTGVSDSVL
CGGSAVAWYLASQGKRAGVDLKQQSQVWQWLSFAENELTPLSCAVAFPLMGVTGVDKKIQ
QNSRAELMGILNVLDQALAPRTFLVGESITLADMAVATAVLLPFKYALEPSDRKLIINVT
RWFTTCINQPQFLAVLGEIPLCERAVSVTPNTNAAAKAKNAQTTPGVDSAAAAAAVVAAA
TNGPPKTEAQLKKEAKKREKLEKFQQKKEMEAKKKTQPAAEKKVKPEKKELGVITYNIPT
PAGEKKDVVGSLPDSYSPQYVEAAWYTWWEKQGFFKPEYGRKSVGEKNPRGIFMMCIPPP
NVTGSLHLGHALTNAIQDCLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLMRERGLSR
HDLGRENFIQEVWKWKNEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSYAVQEAFIRMHE
DGVIYRSKRLVNWSCTLNSAISDIEVDKKELSGRTLLPVPGYKDKVEFGVLVSFAYKVEG
SDEEVIVATTRIETMLGDTAVAVHPADPRYQHLKGKMVLHPFCDRKMPIVLDDFVDMSFG
TGAVKITPAHDHNDYEVGERHSLAFINILDENGLLINVPPPFLGMKRFEARKAVLQALKD
RGHFKEIKDNPMVVPVCSRSKDIVEPLLKPQWYVSCRDMGREAADAVREGRLKIIPDHHL
KTWFNWMDNIRDWCISRQLWWGHRIPAYFVTVSDPSVKAGEDMDGHYWVSGRSEVEAREK
AAKRFNVSADKITLRQDEDVLDTWFSSGIFPFSIFGWPNETEDLNVFYPGTLLETGHDIL
FFWVARMVMMGLKLTGKLPFKEVYLHAVVRDAHGRKMSKSLGNVIDPLDVITGISLEGLH
AQLTDSNLDPVEVEKAKQGQKSDYPNGIPECGTDALRFALCAYTSQGRDINLDVNRILGY
RHFCNKLWNAVKFAMKTLGDTFVPLEKAQLSGEESVSDRWILSRLSAAVALCDAGFKAYD
FPAITTAVYNFWLYELCDVYLESVKPVFSKAEEDGDRQREAMVCRQTLYTCLEVGLRLLS
PLMPFVTEELYQRLPRRQPQTDPPSICVTAYPDSKEFCWNSEEVDLNMEFIMTVVRTIRS
LRADYNLTKTKADCYLQCIDSATVSLVQKYSLQIQTLSYSQAVIPLTASEPVPQGCAVAI
ASDRCTVNLMLKGLIDVEKEVTKLLTKKGDLEKQLEKLQEKMAKSDYKEKVPVKVQEQDA
EKLRQSQAELEKVKEAIDNFRKMM
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggccaccctctacgtgtctcctcatcctgatcatttcaggagtcttctggctctcata
gctgcagagttttctccttcatcccgtccacagatcatcacagaggacccaccttcctcc
ctgaatgtccactcaagaccagcccttagactcggtactggtgtgagcgactctgtcctg
tgtggcgggtctgccgtggcctggtacctggcttctcaggggaagagggcaggtgtcgat
ctgaagcagcagagccaggtgtggcagtggctcagctttgcagaaaatgagctcacccca
ttgtcttgtgctgtagcattccctttgatgggagtcacgggagtcgataaaaagattcag
cagaactcccgggcagagctgatgggtattctaaacgttcttgatcaggcgcttgcacct
agaaccttcttggtgggagaaagcatcactcttgcagatatggctgtagctacagctgtt
ctcctgccttttaaatatgctttggagccctcagacaggaagttgataatcaatgtaacc
agatggttcacaacctgcattaatcagccccagttcctggcggtgcttggggagatacct
ctgtgcgaaagggctgtgtctgtaacgccaaacaccaatgctgctgcaaaagccaaaaat
gcacagactactccaggtgtggactcagctgctgctgctgctgctgttgttgctgctgct
actaatggcccaccaaagacggaggcgcagctaaaaaaggaggcaaagaagagagaaaag
cttgaaaagtttcaacagaagaaagaaatggaggcaaagaaaaagacacaaccagcagca
gagaaaaaagttaaaccagaaaagaaagagcttggagtgataacatacaacatcccaacc
cctgctggagaaaaaaaagatgttgtcggttctcttcctgactcctacagtcctcagtat
gtggaggctgcctggtacacatggtgggagaagcagggcttcttcaaacctgagtatggg
aggaaaagtgttggtgagaagaaccctcgcggcatcttcatgatgtgcatccctcctcct
aacgtgacaggatcccttcatttgggtcacgccctcaccaacgccattcaggactgtttg
acccgatggcacaggatgcgaggagagaccaccctgtggaacccgggctgtgaccatgct
ggcatcgccacgcaggtggttgtggagaagaagctgatgagagaacgaggtttgagccgc
cacgatctggggagagagaacttcattcaggaggtctggaaatggaagaatgaaaagggg
gaccgcatttaccatcagctgaaaaaactgggctcctctctggactgggacagagcgtgc
ttcactatggatccgaaactgtcctatgcagtgcaggaggccttcatccgcatgcacgaa
gatggagtgatttaccggagcaaaaggctggtgaactggtcctgcactctgaactctgcc
atctctgacatagaggtggataaaaaggagctttctggcaggactctgctgcctgtgccc
ggttacaaagataaagtggagtttggggtcttggtgtcttttgcctacaaagtggaggga
tcagatgaggaggtgattgtggcgacaacccgtatcgagaccatgttgggagacacggcc
gtggccgtccaccctgccgaccccagataccagcatctgaaggggaaaatggtgctgcat
cccttctgcgatcggaagatgccaatagtcttggatgactttgtggacatgagctttgga
acaggtgccgtcaaaatcaccccagcacatgaccataacgattatgaggttggagagagg
cacagcctggccttcatcaacatcttggatgagaacggcctgctcatcaatgtgccccct
cccttcctgggcatgaaacgttttgaggccagaaaagcggtgctgcaggctctcaaggac
agaggccactttaaagagatcaaagacaaccccatggtcgtcccagtttgcagtcgctct
aaagacatcgtggagcctctgctgaagccgcagtggtacgtgagctgcagagacatgggc
agggaggctgcggacgccgtcagagagggaaggctcaaaatcatccctgatcaccacctc
aagacctggttcaactggatggacaacatcagagactggtgcatctcccgacagctgtgg
tggggtcaccgcattcccgcctatttcgtcaccgtcagcgatccttctgtgaaagctgga
gaggacatggacggccattactgggtaagcggacggtccgaggtggaggccagggaaaaa
gcggcaaaacgcttcaacgtgtctgcggacaaaataactctcagacaggacgaggatgtt
ctggacacttggttctcgtctggcatttttcctttctccatcttcggttggcctaatgag
actgaagacctgaatgttttctaccccggcaccctgctagaaacgggccatgacatcttg
ttcttctgggttgcccgcatggtgatgatgggcctcaaactgacaggcaagctgccattt
aaggaggtttatctgcacgcggtggtgcgggatgctcacggaaggaagatgagcaagtct
ctgggcaacgtcattgacccgcttgatgtcattacagggatctcccttgagggtctccat
gctcaactgacggacagcaacttggatcctgtggaggtggaaaaggcaaagcagggacag
aagtcagactacccaaatggcatcccagagtgtgggacagatgctctccgctttgcctta
tgcgcctacaccagtcaaggaagagatatcaaccttgatgtaaatcgtatcttgggctac
cgtcacttctgcaataaactatggaacgctgtgaagtttgccatgaagacactaggagac
acctttgtcccgttagagaaggcacagctgtcgggggaggaaagtgtatccgacaggtgg
atcttatccaggctgagtgctgctgtggcgctctgtgacgctggcttcaaggcatacgac
ttcccagccatcaccactgccgtctacaacttctggctctacgagctctgcgatgtctat
ctggaaagtgttaaacccgtgttcagtaaagcagaggaagatggggaccgccagagagaa
gccatggtatgcagacagaccctgtacacctgtctagaggtgggtctccgccttctgtct
cctttgatgcccttcgtcactgaagaactgtaccagaggttaccacgccgacagcctcag
actgacccgcccagcatctgtgtgacggcatacccagactcaaaagagttctgctggaac
agcgaggaagttgacctcaacatggagttcatcatgactgtggtcagaacgatccgatcg
ctcagagctgactacaatctgacgaagactaaagctgactgctaccttcagtgcatagac
tctgctactgtgtccctggtgcagaaatacagtctacagatccagaccttgtcttactct
caggccgtcatccccctgacagccagcgagcccgtcccacaaggctgcgcagtggctatc
gcttctgacagatgcaccgtcaaccttatgctcaagggtcttattgatgtggaaaaggaa
gtgacaaagctgctgacaaagaaaggcgacttggagaaacagctggagaaactgcaagag
aagatggcaaagagtgattacaaggagaaggttccagtgaaggtgcaggagcaggatgct
gagaagctacgacagagccaggctgaacttgagaaagtcaaagaagccatagacaatttt
aggaaaatgatgtaa
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