Oryzias latipes (Japanese medaka): 101159003
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Entry
101159003 CDS
T02443
Name
(RefSeq) desmoglein-2
KO
K07597
desmoglein 2
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04382
Cornified envelope formation
ola04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101159003
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
101159003
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ola04515
]
101159003
Cell adhesion molecules [BR:
ola04515
]
Cadherins
Major cadherins
101159003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
101159003
NCBI-ProteinID:
XP_011471288
UniProt:
H2L333
LinkDB
All DBs
Position
4:complement(1580366..1597968)
Genome browser
AA seq
1350 aa
AA seq
DB search
MARFSVTDVSLLLLLLFLVISAESTKTGTKTLRRMKRNWLPPPAKLIENTDYSHVKYIAK
IRSDKDQKQKVEYYLKGEGADEPPYNLFVVDHVTGLVRITNTVDWETHHSFHLKGIAKYL
NGTQAEEEIPLIFTVVDQNDNAPYFEPHYGSVNESSKKDTYIMQITAKDKDDPTTPNAEI
AYSIISQEPALDRHMFRIGKKTGKLYVKEPNLDREAHDFYKLVIKATDMGGAPEGLTGTG
TVEIKVLDINDNIPTLEKSEYDGTVEENVADVVVMKIKALDKDEKFTDNWLAVFKIEKGN
ENNLFSIETDNKTNEGILKLIKAVDFEEVQNLELGLVIGNVAPFVEGGPLTMDVDVVVGE
GDTAGAGAGAGAGTGAGAGAGAGAGAGAGAGAGVDLGLDGDLGADLDLDLDLDLDLNVDG
ELEGDLGLDAELGPGVGVKPAGGVNPNVGLKPGPGVGVGVNPNLPSMPVKPGQKPNKKPK
PKPKPQPKPKSYPIKIAVKNVPEGPAFIPTIKEVPVSEDKNTLPEDGVITVFAAVDPDTK
KPAEDVSYAKGLDPDNWFTIDEKTAEIKLNKVPDRESPFLVNGVYMAKILAISKDMPPKT
ATGTIAIKVADSNDNCPILTSTHSSLCSDKKTVFVTAFDGDVDPNATPFSFNIVPEGTQG
GWDVELVNGTTAALHSQETLWPGVYELQLEVRDAQNLSCPSSEVFTVDVCTCEGTEDCSL
NVGRLRSKSTEVSLGAIGLLMMALCLLLFVPLFLILCQCGGADKVFPDQFSKLPFETTEY
LIVYDTEGKGEDKELPLHSVPVGSTKNPDGTAFMNFNTMSSAYTNTAHMHTVKGSVNMFG
EGTGLIETDSSPGFVREDLLHGSAAFGIQTFMQDTAALDEDMALPDDFLDSYYSQKSMCD
FPIKDTLMEYDHEGQGSSANSVGCCSLLDSDTDLNFINDLGEKFKTLAEICSPPSITVRS
SVTKATPDVLRTTSDVVQPVLRPQVKSVVVTNKSGINTETSVSSTKVLASSSSKVSRASS
CKTLPHHSHITNVGRSSDIGRSSDIGRSSYLGRSSDLGYSSDLGRSTDLGRSPDLGYSSD
LGRSTDLGRSSGLRRSATLHYPSQRVVLQQPLYYTTNDVMQPMQYVMAPNPQNTLMLDNW
SSGTNLSGLVLINGSQGPSGPLISEGPDSLSGLVTSSTQSFVSLQSPVSPTSPVGAAMYV
SAPPGSGDGSSSLDSWGMMAPNSGGSFMLLSNNVLEEENPGPYQGILPRYVNLENEAVPL
QRVCNVAAQVTIFPEHFAVAVKHSSIKFPIIWDRKLNLKKTGFVLGKNRKTRLQQIMAQF
WFSFLVTLYLFVWGGYKDIYRPTFYKLRPA
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atggctcggttctctgtcacagatgtgagccttctgctcctgctgctcttcttggtaatc
agtgctgaaagtacaaaaacgggaacaaagacactgaggaggatgaagagaaactggctt
ccccctcctgccaagctcattgaaaacacagattactcccacgtgaaatatattgcaaag
atccgctcggacaaagaccagaagcaaaaagtggagtattacctgaaaggtgagggtgca
gatgaaccaccctacaacttatttgtagtggatcatgtaactggacttgtgcgcatcacc
aacacggtggactgggaaacacatcactccttccatctcaaaggcattgccaaatatttg
aatgggactcaagcagaagaggagattccactgattttcactgttgtggaccagaatgac
aacgctccttactttgagccgcactatgggagtgtcaacgagtcgagtaaaaaagatacc
tacattatgcagatcacggctaaagataaagatgacccaacaactcccaacgctgagatt
gcctattccatcatcagccaggagccggctttggaccgccacatgttccgtattggaaaa
aagacgggaaaactttatgtgaaagagcccaacctggaccgagaggcacatgacttctac
aagctggtcatcaaagccactgatatgggaggggcaccagagggtctcacaggtacagga
actgtggagatcaaggtgctggacataaatgacaacattcccactctggaaaagtctgag
tatgacggaacagtggaggaaaacgttgctgacgttgttgtgatgaaaatcaaagctctg
gacaaggatgagaaatttacagacaactggctggccgtctttaaaattgaaaaagggaat
gagaataatctcttttccattgagacagataataaaaccaacgaaggcatcctgaagctg
atcaaggctgtggattttgaagaagtgcaaaacctggagcttggcctggtcattgggaat
gttgctcccttcgtagaaggtggccctttaaccatggatgtagatgttgtggttggtgaa
ggtgacactgcaggtgctggtgctggtgctggtgctggtactggcgctggtgcaggagct
ggcgctggcgctggagctggtgctggtgctggagctggtgttgatctaggtctagatgga
gatttgggagcagacttagatttggatttggatttggatttagatttaaatgtggatggt
gaactggagggggatttaggactggatgcagaacttggtcctggtgttggagtcaagcct
gcaggcggggtcaatcctaacgttggacttaagcctgggcctggagtgggggttggagtt
aacccaaacctcccaagcatgccagtcaaaccaggacaaaaacccaacaagaagcccaaa
cccaaacccaaaccccaacccaaacccaaaagctatcctatcaagatagcagtgaaaaat
gttccagaaggtccagcatttatacccaccatcaaggaggttccagtgtctgaggacaaa
aatacattacctgaagatggagtcatcaccgtgtttgctgcagtcgatccagatacaaaa
aagccggctgaagatgtcagttatgccaaaggccttgatccagacaactggtttaccatt
gatgaaaagactgccgagattaaactcaacaaggtaccagacagagagtctccattcttg
gtcaacggtgtctacatggccaaaattctggctataagcaaagacatgccccccaaaaca
gccacaggaactattgccatcaaagtggcggactccaacgacaactgtcccattctgacc
agcacgcacagcagtctgtgctctgacaaaaagactgtgtttgtcactgctttcgatgga
gatgttgatcctaatgctactcctttctcattcaacattgttcctgaaggaacacaaggc
ggctgggatgtggagctcgtcaatggaaccactgctgctcttcactcccaagaaacattg
tggcctggagtatatgagctgcagctggaggtcagggatgctcagaatctgtcctgccca
tccagtgaggttttcaccgttgatgtctgcacctgtgagggaacggaggattgcagcctg
aacgtggggcggctgagatccaagtcgactgaggtgtctttaggagccattggactactg
atgatggcgttgtgcttgttgctatttgtccctcttttcctgatcttgtgtcagtgtgga
ggagcagataaagttttcccagaccagttcagtaaactaccgtttgaaaccaccgagtat
ctgatagtttatgacaccgaaggcaaaggcgaggacaaggagttaccactccacagtgtt
cctgttggttccacaaaaaaccctgatggcacggcttttatgaatttcaacaccatgtcc
tcagcttacacaaacacggcccacatgcacaccgtaaaagggtctgtaaacatgtttggg
gagggaacaggattgatagagaccgacagctcccccgggtttgtaagggaggacttactc
cacggctctgcagcatttggaatacagacattcatgcaggacacagcggccctggatgag
gacatggccctacctgatgattttcttgacagctactactcacagaaatccatgtgtgac
ttcccaatcaaagacacactgatggaatatgaccacgagggccaggggtcgtctgctaac
tcggtgggctgctgcagccttttggactctgacacagacttaaacttcatcaatgacctt
ggtgaaaagttcaaaactctggcagagatttgctcccctccttccataactgtcagatcc
tccgtgacaaaggcaacacccgatgttctcagaaccacatcggatgtggttcaaccagtt
ttgaggcctcaggttaagagtgtcgttgtaacaaataagtctggcataaacacagagaca
tctgtgtcatctacaaaagtccttgcttcatcttccagcaaagttagcagggcctcatca
tgcaagacacttcctcatcactcccatatcacaaacgttggtcgttcctctgatattggc
cgttcttctgatattggccgttcttcttatcttggccgttcttctgatctgggctattct
tccgatcttggccgttctactgatctgggccgttctcctgatctgggctattcttccgat
cttggccgttctactgatctgggccgttcttctggtctgaggcgttctgccacactgcat
tatcccagtcagagagttgtcctgcagcagccactttactacaccaccaacgatgtgatg
caaccaatgcagtacgtaatggcacctaatccgcagaacactcttatgcttgacaactgg
tctagtggaaccaatctttcaggacttgttctgatcaatggttctcagggtccatctgga
cctcttatcagtgaaggaccagactcactttcagggctagttacctcaagcacacagagc
tttgtaagtctccaaagtcctgtcagccccacaagtccagtcggagctgcaatgtatgtg
tctgcccccccaggttctggagatggttctagctcactagacagctggggaatgatggca
ccaaattctggtggcagcttcatgctactctcaaacaatgtgcttgaagaggagaaccca
ggtccttatcagggcattttgcccagatatgtgaacctggagaatgaggctgttcccctt
cagagggtgtgtaatgtggcagcccaggtaacaatattcccagaacactttgctgttgct
gtaaagcacagttctattaaatttcccattatctgggacagaaaattgaacctgaaaaaa
acaggctttgttttaggaaaaaataggaaaacaaggttgcagcaaatcatggcccagttt
tggttttctttcttagtaacattgtacttgtttgtgtgggggggctataaggacatatac
aggccaacgttttacaaactcagacctgcatag
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