Oryzias latipes (Japanese medaka): 101159173
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Entry
101159173 CDS
T02443
Symbol
nup160
Name
(RefSeq) nuclear pore complex protein Nup160 isoform X1
KO
K14303
nuclear pore complex protein Nup160
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101159173 (nup160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101159173 (nup160)
03036 Chromosome and associated proteins [BR:
ola03036
]
101159173 (nup160)
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101159173 (nup160)
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
101159173 (nup160)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_Nup120_160
TPR_NUP160_120_M
TPR_Nup160_C
NUP160_helical
HEAT_Nup120
TPR_2
TPR_1
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
101159173
NCBI-ProteinID:
XP_011471155
LinkDB
All DBs
Position
6:4324703..4348084
Genome browser
AA seq
1398 aa
AA seq
DB search
MAALDRSYIEICGFERSGACRFREVTVTQTGVSCLPGGLKVPDNAGAFHYEESGNLSTVT
SNRFVHWITSGDTVQLVEESLDINLLNNAVKFKFPHCSVLPGGVSIQETLYNVIILICTN
QSVHRVLLPHPARMYRSELVSELHMQSIFTDVGKLNLQDWPNSAVIPNVPGLSGSLSTSA
AWLSLQGEAHFALASPSGGIAVVTLPRHDTQGDLSVVELKRSSMMRRISGWMPTAIRGEQ
SPGDLVLSMAVRELEEDSFIFALCQDHRLRMWSLREQTCLLEIDILEYMPACRGVKRLSG
QGHRLRLAFSPSTGLCLCVYLAVPQKGQFTVFQLVGTDNNRYSLEHISSLFSTLETLVDF
SLTSSDVWALWVDDSNATVVKYISFEQSASGQWNQVFVQPLPEEEVPVGMDLDPRETYLD
VLFSPLHFSAAAIIKALQIYGRGSEELLDSSWETLKKEVTLAVESEQLQSSVTEFEFSQE
EYRQLQEEFWSRFYSCCLQYQEVLSSPLGLTVDPHTGMGCLLRKSFVSFLLPCFAVDHLY
LSYDQYLMSEEDTPITEDPDVGRDVLQLVQCVRLLSDSVSGEMAYEMEKALEYLQTPERA
AELVMEDMLCNDSKNAIADIQSIMQDVRNPTTAMMVLLRELELETDLELGGEGSAMPDQT
LSSRLSLSRLYSSSTAVSLLGQAVCHMAMTRAMFCRDLLILQKLYLHFGDNVFLGGGNQL
LQLQQDLIPRTSHLLSSYHLLKHVSCSLASSVAMDTIDVNLQNLTALELTDTPSICCGRL
GLCPQTVVELFYRTAGRKLVVSQMFSHQQIPSLLLWSTVISSVVQLLAQLLWPSNPGFQF
PECLLAGCQYLQLQEYVRLISPWCQVNVGSCRFVLGQCYLANGEGQKALQCFQEAASEVE
KEDFLMKLVASEDEEAPPRMQYYNKVLRLLEDMGLPELVVQLASLAVTEAGGGAVRQAAL
WTRMFKHHLDLGHNSEAYEALTQNPDSSMQLDCLRQLVVVLCERSQLRDLVQFPYVNLHD
EVVNIIESRARGLDLLTHNYYELLYAFHIGRHNYRKAGTVMFEFGMRLGREVRTRLGLQK
QVNCYLAALNCLRLIRPEYAWIVQPAASSACKRAGASPKRNSDGDILGEPATGRQQVDIL
ELQNLEKEYFLSRSRLTLAQHHPSSAAVAGAVSEAELVTLLVQNGLFDSALSLCHTFKLD
LSPVFEGLAFKCIKLQLGGEESQNEAWSWLAANHLSVINTKESSAADEAWRLLASYLDRY
PSTNGQHHRLVIHKLLSHGVPLPDWLIQSYKRADAPSLLRLLLNFDQLESAAELVLEYVD
AVLGRGHQYFGIQNPLSATSHPAWLPYTAIDQLLRALSETQTHNTLHTRVQDKLDEYHRT
VRQLSALRLTTQRRQITT
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atggcggccctggaccgcagctacatcgagatctgcgggttcgagcgaagcggcgcgtgc
cgtttccgagaggtgaccgtgactcagacaggtgttagctgtctccctggggggttgaag
gttcccgacaacgccggagcctttcattatgaggagagcggcaacctgtcgactgtcacc
agcaacagatttgtccactggatcacgtcgggagacacggtgcagctggtggaggagtct
ctggacatcaacctcctgaacaatgccgtcaagttcaagttcccccactgctctgtcctg
cctgggggggtcagcatacaggagaccctctacaatgtcatcatcctcatctgcaccaat
cagagtgtccacagagtgctgctgcctcatcctgctcgcatgtaccgcagcgaacttgtc
tctgagctgcacatgcagtccatcttcactgatgtggggaagctgaatcttcaggattgg
cctaacagcgccgtcatccccaacgtgccaggactttcggggagtctgagcaccagtgcg
gcctggctcagcctccagggagaggcccacttcgctctggcatcaccatctgggggcatc
gctgtggtgacgctgccacgccacgacacacagggcgacctgtctgtggtggagctgaag
aggagctccatgatgaggaggatctcaggatggatgcccacagccatccgaggggagcag
agtccaggagatcttgttctcagcatggctgtcagagagctggaggaagactccttcatc
tttgctttgtgccaggaccacagacttcgcatgtggtctctcagggagcagacgtgcctt
ctggaaatagacattctggaatatatgccggcctgcagaggtgtaaaacgactgtctggt
cagggtcaccgcctacggctggccttctccccttccaccggcctctgtctgtgtgtttac
ctggctgtccctcagaaaggacagttcaccgtctttcagctggtgggcactgacaacaat
cgctacagcctggagcacatctcctccctgttcagcacgctggagaccctggtggacttt
tctctgacctcctcagatgtctgggctttgtgggtggatgactccaatgccacagtggtc
aaatacatcagctttgagcagagtgcatcaggtcagtggaaccaagtgtttgttcagcct
ctgcctgaggaagaagttcctgtgggaatggatctggaccccagggagacctatctggat
gtcctgttctctccgctgcacttcagtgccgcggccatcatcaaagctctgcagatctac
ggcagaggctcagaggagctcctggattcatcatgggagactctgaagaaggaagtaact
ctggcagtggagagcgagcagctgcagagcagcgtcacagagttcgagttctctcaggag
gagtaccgtcagctgcaggaggagttctggtcccggttctactcctgctgtctgcagtac
caggaggtgctgtcgtcccctctgggcctgacagtagacccgcacacagggatgggctgt
ttgctgcgaaagagttttgtgtccttcctgctgccttgctttgcggtggatcacctgtac
ctgtcttatgatcagtatctgatgtctgaggaggacactcccatcactgaagacccagat
gtgggtcgggacgtcctgcagctggttcagtgtgtgcggttgctcagcgactccgtctct
ggagagatggcgtacgagatggagaaggctctggagtacctgcagaccccagagagagca
gcggagctagtcatggaagacatgctctgcaatgacagcaagaatgcaatcgccgatatc
cagagcataatgcaggatgtgcggaatccgacaacagccatgatggttctgctcagggaa
ctggaactggaaacagatttggagcttggaggggaaggatctgcaatgcctgatcagacc
ctgagctccaggctcagcctgtctcgtctgtacagcagcagcaccgccgtgtctctcttg
ggtcaggctgtttgtcacatggccatgacccgggccatgttctgcagagacctcctcatc
ctgcagaagctctacctgcactttggagacaatgtttttcttggaggagggaaccagctg
ctgcagctccagcaggatctgatcccccggacgtcccaccttctctcctcctatcaccta
ctcaaacatgtcagctgcagcctggcctcctctgttgccatggacacaatagacgtgaac
ttacagaacctcacagccctggaactgacggacacaccgagcatctgctgcggccgactg
ggcctctgtcctcagacagtggtggagctcttctaccggactgcaggcaggaagctggta
gtctctcagatgttttcccatcagcagatcccctccctgctcctctggagcacagtcatc
tccagcgtggtccagctgctggctcagctgctttggcccagtaaccctggtttccagttc
cctgagtgcctgctggctggctgtcagtacctgcagttgcaggagtacgtgaggctgatc
agcccctggtgtcaggtgaacgtgggctcctgccgctttgttctgggtcagtgttacctg
gccaatggggaggggcagaaggccctgcagtgtttccaggaagcggcctccgaggtggag
aaagaggacttcctgatgaagctggtggcgagcgaggatgaggaagctccacccagaatg
cagtactacaataaggttctgcgtcttctggaagacatgggtctgccggagctggtggtc
cagttggcctctctggccgtcacagaggcgggagggggggcggttaggcaggccgctctg
tggacaaggatgttcaagcaccatctggacctgggacacaacagcgaggcctatgaagct
ctgacccagaacccagacagcagcatgcagctggactgtctccgtcagctggtggtggtt
ctgtgtgagcgctcccagcttcgagatttggtccagttcccctacgtaaacctgcacgac
gaggtggtgaacattatcgagtcccgggcccgaggtctggacctgttgacccacaactac
tacgagctgctgtacgccttccacatcggccgacacaactacaggaaagcggggacggtc
atgttcgagtttgggatgcgtctgggccgggaggtccggacccggctgggcctccagaag
caggtgaactgctacctggctgctctcaactgtctgagactcattagacccgagtacgcc
tggatcgtccagccggccgccagcagcgcgtgcaagcgggcgggggcatcgccaaagaga
aactcagacggagatattcttggtgaaccagctacagggaggcagcaggtggacatcctg
gagctccagaatctagaaaaagagtacttcctgtcccgcagccgcctcacgttggcgcag
caccacccatcctctgctgcagttgcaggcgctgtgtcggaggcagaactcgtcaccctc
ctggtccagaacgggctttttgactcggcgctgtctctctgtcacaccttcaagctggac
ctaagtccggtctttgagggactagccttcaagtgcattaagctgcagttgggaggggag
gagtctcagaatgaagcctggagctggttggctgctaatcatctgtctgtcatcaacacc
aaggagtccagtgctgcagatgaggcgtggcgcctgctggcctcctacctggacagatat
ccctccacgaatggacagcatcaccgcctcgtcatccacaaactgctgtcacatggggtg
cctctgcctgattggctcatccagtcctacaagcgtgctgatgccccgtctctgctgcgc
ctgctgctgaactttgaccagctggagagcgccgctgagctggtgttggagtacgtggac
gcagttttaggtcgtggtcaccaatactttggaatccagaacccactgtctgccacctcc
cacccggcgtggctgccgtacaccgccatcgaccagctgctgcgcgccttgagcgagacg
cagacccacaacactctccacaccagagtccaggacaaactggacgagtatcacagaacc
gtacggcaactgagcgcgctcagactcaccacgcaaagacggcagataaccacatga
DBGET
integrated database retrieval system
