Oryzias latipes (Japanese medaka): 101159227
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Entry
101159227 CDS
T02443
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101159227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ola03021
]
101159227
03036 Chromosome and associated proteins [BR:
ola03036
]
101159227
Transcription machinery [BR:
ola03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101159227
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101159227
PBAF complex
101159227
GBAF(ncBAF) complex
101159227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
CTV_P23
Motif
Other DBs
NCBI-GeneID:
101159227
NCBI-ProteinID:
XP_004080303
UniProt:
H2LLH2
LinkDB
All DBs
Position
19:complement(6911151..6921381)
Genome browser
AA seq
494 aa
AA seq
DB search
MMASKGGFTGPPMNPNLNPMNVGHPTGMRMPGMLQPPTGYPRSIPQFAQRPGIPPSRMGG
PMGVMGSQMPGPSYGGGNLPMRPGMDASRKRFLHHQQQQQEALGSLRRGAKRRKMADKVL
PQRIRDLVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPIMQKRKLRIYISNTFTPS
KPEGEESEKVSSWELRVEGKLLEEPGKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRM
PTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRASIMQALWL
YIKNNKLQDCHEKEFINCNRYFRQIFNCPRMRFSEIPMKLAGLLQHPDPIVINHIISVDP
TDQKKTACYDIDVEVDDPLKTQMNSFLSSANSQQEIATLEMKIHETIEYINQLKTERDFM
LSFSNSPQEFIQDWLKSQCRDLKLMTDVTGNPEEERRAEFYEAPWMPEAVGRYVYSKVQQ
RRQELEQVLGIRLT
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgatggcatcgaaaggggggttcacgggtcctccgatgaatccgaacttgaaccccatg
aatgtcggacaccccacggggatgagaatgcccggaatgctgcagcccccaacgggttat
ccccgaagtattccccagtttgcccagcgccctggaatcccacccagcaggatggggggt
cctatgggggtaatggggagtcagatgcccggtccctcttacggtgggggtaaccttccc
atgcggccaggcatggacgcgtcaagaaagcgttttctccaccaccagcagcagcagcaa
gaggcgctcggaagcctcagacgaggagccaaaagacgcaaaatggccgacaaggttttg
ccacagaggatccgagacctcgtccccgagtcccaggcttacatggacctcctggctttt
gaaaggaaactggatcaaaccatcgctcgcaagcgcatggagattcaggaggccatcaag
aagcccattatgcaaaagcgcaagctgaggatctacatttccaacactttcactccaagc
aagcccgagggcgaggagtcggagaaggtgtcctcctgggagctgagagtggaaggcaaa
ctcctggaggaacccggcaagcagaagaggaagttctcatctttcttcaaaagcctggtg
atcgagctggacaaggagctctacgggccggacaatcacttagtggagtggcacagaatg
cccaccacccaggagacggatggtttccaggtcaaaaggcccggcgacgtcaacgttaaa
tgcactcttctgctcatgcttgaccatcagcccccccagtacaagctggacccccgtctg
gcccgtctgctgggcgtgcacacgcagactcgggccagcatcatgcaagccctgtggctt
tacatcaagaacaacaagctgcaggactgccacgagaaggagttcatcaactgcaaccgc
tacttcagacagatctttaactgtccacgcatgaggttctctgagattcccatgaagctg
gcgggcctgctgcagcaccctgaccccatcgtcatcaatcacatcatcagtgtggacccc
acagaccagaagaaaaccgcttgctatgacatcgacgtggaggtggacgaccctctgaaa
acccagatgaacagcttcctgtcctccgccaacagccagcaggaaatcgccactctagaa
atgaagattcatgaaacaatcgagtatattaaccaactcaagactgagagagacttcatg
ctgagcttcagcaacagtcctcaggagttcattcaggactggctgaagtctcagtgcaga
gatctgaagctgatgacagatgtgaccggaaacccggaggaggagaggagggctgagttc
tacgaggctccctggatgccagaggcagtgggtagatacgtctactccaaagtgcagcag
cgaagacaagagttggagcaggtgttgggaatccgactcacctga
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