Oryzias latipes (Japanese medaka): 101159269
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Entry
101159269 CDS
T02443
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1 isoform X1
KO
K17908
autophagy-related protein 18
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04136
Autophagy - other
ola04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101159269
04136 Autophagy - other
101159269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101159269
03029 Mitochondrial biogenesis [BR:
ola03029
]
101159269
Membrane trafficking [BR:
ola04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
101159269
Mitochondrial biogenesis [BR:
ola03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
101159269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
WD40_Prp19
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
BCAS3_WD40
Motif
Other DBs
NCBI-GeneID:
101159269
NCBI-ProteinID:
XP_004071946
LinkDB
All DBs
Position
8:25227797..25236451
Genome browser
AA seq
454 aa
AA seq
DB search
MEAAEGAGATGEADEPRPRFGCASFNQDSTSLALGTRTGYKIFSLSSVEQLECIYQNAEV
PDVFIAERLFSSSLVVVVSRAVPQRMTIYHFKKGTEICSYSYSSNILAVKLNRQWLVVCL
EESIYIHNIKDMKLIQTLLNVPPNPSGLCALSINNSNSFLAYPGSATTGEIVVYGANTLS
TVTVISAHDAPLAALTFNTSANKLASASERGTVIRVFSIPEGLRLFEFRRGLKRYVSIRS
LSFSPDALFLCASSNTETVHVFRLEQLEPTEGAEPATWTSYVGRMLSAASSYLPAQVCDA
MSQDRAFATVHLTPSAHSSVCSLVSIQKLLQLLVVTADGQLCVFNVDLQDGGECELLFKH
SLFDDHGSTAKSRESADSEQTVCPPSYAATAALPASRPVTATLTGYSEDSGAKRGEVIPE
HEFASGPVRLDDENEFPPIKVCRDGAAGCRGGPL
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcggaaggcgcgggcgccaccggcgaagcggacgagccgcggccccggttc
ggatgcgcttccttcaaccaagactccacgtcgctagctttgggaacaaggacaggctac
aagattttttccctttcttctgtagaacagctggagtgcatctaccagaacgcagaggtt
cctgacgtcttcatcgcggagcgtctgttctccagcagtctggtggtggtggtgagccgt
gccgtgcctcagcgcatgactatctaccacttcaaaaagggaacagagatctgcagctac
agctattccagcaacatcctggctgtgaagctcaacagacagtggttggtggtgtgcctt
gaagaatccatttacattcacaacatcaaagacatgaagctgatccagactctgctcaac
gtgccgccaaacccctcaggtctctgcgctctctccatcaataattccaactccttcctg
gcataccccggcagtgccacgactggagagattgtggtgtacggtgccaacactctgagc
acagtgacggtgatctctgcccacgatgctcctctggcagctttgaccttcaacacctca
gccaataaactcgccagtgcttcagagaggggtaccgtcatccgagtcttctccattcct
gaaggcctccgtctctttgagtttcgccgaggcttgaagaggtatgtcagcatccggtct
ctgtccttcagtccggatgctctcttcctctgcgcctccagcaacactgagactgttcac
gtcttcaggctggagcagctggaaccgacggagggggcggagcccgccacctggacctca
tacgtgggaaggatgctctcagcagccagcagctaccttcccgctcaggtgtgtgacgcc
atgagccaggaccgcgccttcgccaccgttcacctcacgccatccgctcacagcagcgtc
tgcagcttggtcagcatccagaagcttctgcagctgctggtggtcacggctgacggccag
ctctgcgtctttaacgtggatctgcaggatggcggcgagtgcgagctgctcttcaaacac
agcctctttgacgaccacggcagcacagcgaagagcagagagtccgcagactcagaacag
actgtgtgccccccctcatacgctgcgaccgccgccttacccgcctcccggcccgtcact
gcgaccctcaccggttactctgaggacagcggggcaaagaggggggaggtcatccccgag
cacgagttcgcctctggacccgtgcgtctggacgacgagaacgagtttcctcctataaag
gtgtgccgtgacggagccgccggctgcaggggggggcccttgtga
DBGET
integrated database retrieval system
