Oryzias latipes (Japanese medaka): 101159296
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Entry
101159296 CDS
T02443
Symbol
gata6
Name
(RefSeq) transcription factor GATA-6 isoform X1
KO
K17897
GATA-binding protein 6
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
101159296 (gata6)
Transcription factors [BR:
ola03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
101159296 (gata6)
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Gene cluster
GFIT
Motif
Pfam:
GATA-N
GATA
DUF7573
Zn_Ribbon_TF
Zn_Ribbon_Prim
Motif
Other DBs
NCBI-GeneID:
101159296
NCBI-ProteinID:
XP_011485328
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Position
17:28578207..28583191
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AA seq
519 aa
AA seq
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MKEGSVDGDFQGRTLRSFFITPAVYGKCSWMDLGEHSWSMVKREVSSSPGSPAEQTYLSG
DRRDGPPSDDLRTPPSELDALGHRRSDSRSLHSYLHFGHHTNPLSTEDIPLFTDLDQGSK
LVLSAGAHKASLLVDPTDMYQTLAIAAAQSQAGYDSSSAGYMHSNPNSPVYVPSSRVNPM
IPSLSYLQASGSAQTSHAVSSHSVWSQSAPESPSYSSGSPHASSRFHYPPSPPMNNGTPR
DSSYGNTLNVSGRDQYGLSRPLSGTYTSPYSPYVAPQLPSPWTGGPFDNTMLHTLQSRGA
PLIRGPNGVSDILDDMGESRECVNCGSISTPLWRRDGTGHFLCNACGLYSKMNGLSRPLI
KPQKRTSTSRRIGLSCANCQTSTTTLWRRNAEGEPVCNACGLYTKLHGVPRPLAMKKEGI
QTRKRKPKTLSKTKGSSGNNSVSMTPTSTSSSNSEDCSKNSSPTGQVSSSVLSSPGEGTG
SGSAVKYPGQDSLYTSVGLTQSSDVASVRGEPWCPMALA
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaggttcagtagacggtgatttccagggtagaactctccgctctttttttatt
accccagcggtgtatggaaagtgctcctggatggacctgggtgaacacagctggtccatg
gtcaagcgagaagtatccagcagcccaggctcgccggctgagcagacctacctgtccggt
gacagacgggacgggcccccttcggatgacctgaggactcccccgagcgagctggacgca
ctggggcaccggcgctcggacagcaggtcactacactcctaccttcacttcggacaccac
accaaccctttgagcaccgaggacatcccgctgtttacggatttggatcagggaagcaaa
ctcgtcctgtccgcaggagcgcacaaagccagcctgctggtggaccctaccgacatgtac
cagacgctggccatcgcggctgcgcagagccaggctggatatgattcatcctccgctggt
tatatgcactccaaccccaactcccccgtgtacgtgcccagctcccgcgtgaaccccatg
attccgagcctgtcctacctgcaggccagcgggtcggctcagaccagccacgcggtcagc
agccactcggtgtggtcccagtccgccccggagagcccatcctacagcagcggcagcccg
cacgcctccagccgcttccactacccccccagtccgcccatgaacaacgggacgccccgg
gacagcagctacggcaacacgctgaacgtgagcggcagggaccagtacggcctctcccgc
cccctcagtgggacttacaccagcccatactccccctatgttgccccccagctgccctca
ccgtggaccggggggcctttcgacaacaccatgctgcacaccctgcagagcagaggcgcg
cccctaatccgaggaccaaacggagtttcagacatcctcgacgacatgggggagagccgg
gagtgcgtgaactgcggctccatctccacgccgctgtggaggcgcgacggcacgggccac
tttctctgcaacgcctgcggcctctacagcaaaatgaatgggctgagccggccattaatt
aaaccgcagaagcgcacgtcaacctccaggaggatcggcctgtcctgcgccaactgccaa
accagcacgaccaccctgtggcgcagaaacgcggagggggagccggtgtgtaacgcctgc
ggactctacacaaaactgcacggggtacctcggccccttgccatgaagaaagaaggcatc
cagacaagaaaaagaaaacccaaaactttgagtaaaactaaaggatcctcaggcaataac
tcggtctcgatgactcccacatccacgtcctcatcgaattctgaagactgctccaagaac
agttctcctactggacaggtcagttcgtccgtgctgtccagccctggagagggaacaggc
tcaggctcggctgtgaagtacccaggacaggacagcctgtacactagcgtgggcttgacc
cagtcctcagatgtagcttcagttagaggcgaaccatggtgccccatggctttagcgtga
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