Oryzias latipes (Japanese medaka): 101159468
Help
Entry
101159468 CDS
T02443
Symbol
gigyf1
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101159468 (gigyf1)
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
101159468 (gigyf1)
Surveillance factors
Other surveillance factors
101159468 (gigyf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
SPIN90_LRD
GNAT_acetyltr_2
Motif
Other DBs
NCBI-GeneID:
101159468
NCBI-ProteinID:
XP_023804697
LinkDB
All DBs
Position
18:6247257..6273659
Genome browser
AA seq
1084 aa
AA seq
DB search
MTAETLNFGPEWLRALSSGGSVTSPPPSPAMPKYKLAEYRYGREEMLALYVKDDKVPEDM
QDKEFAAILQNDPMQPLALVPLTEEEQRNFSMSVNSVAVLRLMGKGVGGASPAGVARGRG
ATRGGRGRGRGEGGFYQRSIEETEVGFSRGVREIHRSQSWDDRGNARFEKPLRREAGRPG
FEEAGGPGAPGRKDYTRADSDNWRTLREEQEEEEGEPGTNWRHGVPRRDDGGPRSAGWRD
HSGPGEGRRRKFDFDFRDSDGHVAGRRRAGSEGLEDDRDGLPEWCTEDAEEDGEMGTFDS
SGAFMSIKKGGKETILEDEFEFKGIEEEEEEEEEEILPEAEKNNTEGEKDKAVPQFSLPE
SKDVSSALVDDKAKPVAVSSSSSSSSLPTHCAPPSLEPQPVAQVVENTQLSISHSIKSNS
TPHEDLAPIGISKPQLSPGSSSPSSSSSSSGLRPPAPSSSSSSSSAAAAPLLPPSGGDAE
DDDGMKHLQQEAEKMVASLQDTSLEEECFTQALQQQESRNTAAALPLSHEAAMKWFYKDP
QGEIQGPFTTVEMCEWFQAGYFTMSLLVKRGCDEGFQPLGDVIKMWGRVPFAPGPSPPPL
LVRQLPPTQRPQPNRGPAGTGNLDQERLKKQQEIAAAAIYQQLQQQQQLFQLINRCSEQG
LMPSMNRSMSVPDTGSMWDMHTSASQPSGGEASLWDITMNSSTQGPTLEHLQKLQERRDA
ELRAKREEEEQRKRREEKRRQQEEQKRREEEELFRRKRQQELIMKLLQQAPQQTGAGSSN
WSGGSSGLSKPGKPSALALLEMQQEAERLLKQQRVQQQRERHSGLSMGSSSMGGQWADGV
GMWGALESKSGSGGSSSSMGLWDEALKNQASLRGNSNNLGLKNSRSSPSLNEQYMMRRKR
TEEEEKLLKLLQGMKPQDGFTTWCEQMLHALNSSANNSSCSLDVATIVAYLKEVESPYAV
LDFIRSYLGDTVEAKEFAKQFLERRAKQKANQQRQQQQQLSKDVGGLNMNFPLQDSMRGM
NPSTLQSMFQANHMGKAGLYDNQGGKMKKKPPMMLHSDPSILGYSFPNTSECLSLNEMEM
VEDY
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagactcttaacttcggcccagaatggctccgtgcactgtccagtgggggg
agtgtgacgtctccccccccttcccccgccatgccaaagtacaagctggccgagtaccgc
tacggccgagaggagatgttagcactttatgtcaaagacgacaaggtcccagaggacatg
caggataaggagtttgctgctattctgcagaatgaccccatgcagccgctggcactggtg
cctctcacggaggaagagcagaggaacttctccatgtctgtgaacagtgtggcggtgctg
aggctcatgggaaaaggtgtgggaggggcctcccccgctggagtggcccgtggacgaggg
gccacacggggcggacgaggtcgaggtcgtggagaaggtggattctaccaaagaagtatt
gaagaaacggaggtgggcttcagtcgcggcgtccgtgagattcaccgcagtcaaagctgg
gacgaccgagggaacgctcggtttgagaagcctctgcgacgagaggcggggcgtcccggc
tttgaggaagctggaggtcccggggctccggggaggaaggactacaccagagccgacagc
gataactggcgcaccctccgggaagaacaggaggaagaagagggggagccgggcaccaac
tggaggcacggcgtgccccgcagggacgatggcggtccgcgctcagcaggctggcgggac
cacagcggcccgggtgaaggtcgcaggaggaagttcgacttcgacttccgggactccgac
ggtcacgttgctgggcgccggcgagcgggcagcgagggactcgaggacgacagggacggt
ctgcccgagtggtgtacggaggacgcggaggaggacggagagatgggcacctttgactcc
tcgggggcttttatgtccattaagaaaggcggtaaggagacaatcctggaggacgagttt
gagtttaagggcatcgaagaggaggaggaggaggaagaggaggagattttgccagaggca
gagaagaacaacacagaaggagagaaagacaaagcggttcctcagttttccctcccggag
agtaaagatgtctcatccgccttggtggacgacaaggcaaagccggttgccgtctcctcc
tcctcctcctcttcctctctcccgactcactgcgctcctccgtctctggagcctcagccg
gtggctcaggtggtggaaaacactcagctgagcatcagccactctatcaagagcaacagc
acacctcatgaggacttggctcccattgggatctccaagccccagctgagtcctggctcc
tcctcgccctcctcctcctcgtcgtcctctggtctgcgtcctccagctccctcctcctcc
tcctcctcctcctctgctgctgctgctcctctccttcctccttcaggaggagacgctgag
gacgatgacggcatgaaacacctgcagcaggaggcggagaagatggtggcgtcgctgcag
gacacctctttggaggaggaatgcttcacccaggcgctgcagcagcaggagagcaggaac
acggcggccgctcttccgctgagtcacgaggcggccatgaagtggttctacaaagacccg
cagggggaaatccagggtcccttcaccacggtggagatgtgcgagtggttccaggccggc
tacttcaccatgagcctgctggtgaagcggggctgcgacgagggctttcagcctttgggg
gacgtcataaagatgtggggccgcgtgcccttcgcccccgggccctccccgcctcccctg
ctggtgagacagctcccaccaacgcagcgcccgcagcccaaccgggggcccgccgggact
ggcaacctggaccaggagcgcctgaagaagcaacaggagatagcagcagcagctatttat
cagcagctccaacaacagcagcaacttttccagctcattaacaggtgcagtgagcagggt
ttgatgccttcgatgaacaggtcgatgtctgtgccagatacagggtccatgtgggacatg
catacctcagcttcacagccgtcaggcggtgaagccagtctttgggacataacaatgaat
tcttcaactcagggtccaactctggaacatcttcagaagctccaggagaggcgagacgcc
gaactcagggcaaagcgtgaggaggaggagcagcgcaagagaagggaggagaaaaggagg
caacaggaggagcagaaacgaagggaggaagaggagctcttccggcgcaagcggcagcag
gagctgatcatgaagctgctgcagcaggcgccccagcagacgggggcgggaagctccaac
tggagcgggggctcgtccggcctgtcgaagcccgggaagccgtcggcgctggccctgctg
gagatgcagcaggaggcggagcggctcctgaagcagcagcgcgttcagcagcagcgagag
cggcactcgggcctgtccatggggagctcctccatgggggggcagtgggcagacggcgtg
ggcatgtggggggcgctggagtccaaaagcggcagcggcggctcgtcgagcagcatgggc
ttgtgggacgaggccttgaagaaccaggccagtctgcgcggaaacagcaacaacctgggc
ctgaagaacagccgcagcagcccctccctgaacgagcagtacatgatgcgccggaagagg
acggaggaggaggagaagctgctgaagctgctgcagggcatgaagcctcaggacggcttc
accacctggtgtgagcagatgctgcacgctctcaacagctccgccaacaactcctcctgc
tccctggacgtcgccaccatcgtggcgtacctgaaagaggtggagtctccctatgcagtg
ctggatttcatccggtcttaccttggggacaccgtggaagccaaagagtttgccaaacag
tttctggagcgccgtgccaaacagaaagccaaccaacagaggcagcagcagcagcagttg
tcgaaggacgtgggaggactgaacatgaacttccctctgcaggactcgatgcgaggtatg
aacccgagcaccctgcagtccatgttccaggccaaccacatggggaaggctggtctctat
gacaaccagggaggaaagatgaagaagaagccgcccatgatgctgcactctgaccccagc
atcttagggtactcattccccaacacgagtgagtgtctgagcctgaacgagatggagatg
gtggaggattactga
DBGET
integrated database retrieval system
