KEGG   Oryzias latipes (Japanese medaka): 101159474
Entry
101159474         CDS       T02443                                 
Symbol
wdr3
Name
(RefSeq) WD repeat-containing protein 3
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ola00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    101159474 (wdr3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ola03009]
    101159474 (wdr3)
Ribosome biogenesis [BR:ola03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    101159474 (wdr3)
SSDB
Motif
Pfam: Beta-prop_WDR3_2nd Beta-prop_WDR3_1st Beta-prop_IFT122_1st Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st WDR55 WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Utp12 Beta-prop_TEP1_C DSE1_N NBCH_WD40 ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_WDR41 Beta-prop_VPS8 Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_Aladin CFAP251_N Beta-prop_NOL10_N ASA1 PEP5_VPS11_N Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_EIPR1 Beta-prop_SPT8 WDR54 Beta-prop_Vps41 Beta-prop_ACSF4 Beta-prop_NUP159_NUP214 Beta-prop_WDR75_2nd WD40_like VPS11_N Beta-prop_LRRK2 Beta-prop_WDR35_TULP_N PAC11 Utp21 Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 101159474
NCBI-ProteinID: XP_004081424
LinkDB
Position
21:complement(1602478..1623069)
AA seq 940 aa
MGLTKQYLRYAPSAVFGVIGSQKANIAYVTLRGGERGRYVAVAACEHVFVWDVRKGEKVL
ILQGQKHEVSFLCPSPDGVHVAVGYEDGAVRIFSLLNGESSVAFNGHKTAVTVMNYDALG
ARLVTGSKDTDVIVWDIINECGLYRLRGHKDAITQALFLKNKNLMVTSSKDSFVKWWDLD
TQHCFKTMVGHRSEVWALALLKQEKRLLTGSADSELRAWDIAALEEDKTEGGPKVKKGKT
LLEEDEDDEEEKEDESLDERILSCKKAGSILREARDRVVSMTTDSRARVVACHGNDSVLE
LFTVLTEEEVQRKMTKKMKKARKKAAKAQEEAGGAAAEPVVERTLKDEIVRLTNIKASAK
IRWADCLSGAGGELKVALLLQNNTVETYSLKTSDENPSANKTARLTLGGHRTDVRTLAFS
SDNLAVLSASGDTVKVWNRSTLQVIRTMTCEYALCSLFVPGDRQIILGTKSGKLQIFELA
SGSLLETSDAHDGAVWSLCLAPDQRGIVTGGADKTVKFWEFELIKDQSSAQKRLAVKHVR
TLQLEDDVLCVRFSPDHRLLAASLLDCTVKIFHSDTLKFFLSLYGHKLPVLCLDISHDST
LIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMFLQFVPKTHLFFTAGKDRKIKQWDADK
FELVQTLEGHHREVWCLAISPNGDHLVSASHDKSLRLWERTREPIILEEEREMEREAEFE
ESVAKGDAPVVPGEVEGEAAPAAKKTVETVKAAERIMEALELHREELRKMEEHKYACEGA
GKQLPPPKPNPVLVAFGNVSPARYVLDVIKAVRSSELEVSLLVLPFPYVPELLQLFSSYI
HQGLEVELVCRCLFFLLKIHFGQITSNQMLLSVIDDLHSVTVSKVCEIRDVMGFNSAALQ
FLQRQIESQENVTFFAEATGRLEEKKKRRRKRERAVLTIA
NT seq 2823 nt   +upstreamnt  +downstreamnt
atgggtttgaccaagcagtacctgcgctacgcgcccagcgccgtgttcggcgtcatcggc
agccagaaggccaacatcgcatacgtgactctgcgcggcggggagagggggcgctacgtg
gccgtggccgcgtgcgaacacgtcttcgtctgggatgttcggaaaggagagaaggttctg
atcctgcaggggcagaagcacgaggtgagcttcctgtgcccctcccccgatggagtccac
gtcgccgtgggttacgaggacggggcggtgaggatcttcagcctgctgaacggggaaagc
agcgtcgccttcaacggccacaaaacggccgtcaccgtcatgaactatgacgccctcggg
gcgcggctcgtcaccggctccaaggacacggacgtgatcgtgtgggacatcatcaacgag
tgcggcttataccgcctgcggggtcacaaggacgccatcacgcaggccttgtttctgaaa
aacaagaacctcatggtcacgagctccaaagacagttttgtgaagtggtgggatctggac
acacagcactgctttaagaccatggtgggccatcgcagcgaggtgtgggctttggcgctg
ctgaagcaggagaagaggctgctgacgggctcggccgacagcgagctccgagcgtgggac
atcgccgccctggaggaggataaaacggaaggaggacccaaagtgaagaagggcaaaact
ttattggaggaagatgaagatgatgaggaggaaaaagaggatgagagtcttgacgagcgc
atcttgagctgcaaaaaggccggctccatcctgagggaagcccgagacagagtggtctcc
atgacgacggactccagagccagagtggtggcctgccatggaaacgattctgtgctggag
ctcttcaccgttctgacagaggaggaagtgcagagaaaaatgaccaagaagatgaagaaa
gccagaaagaaagcagccaaagctcaggaggaggcaggaggagccgccgctgagccggtg
gtggagcggacgctgaaggacgagatcgtccggctaaccaacatcaaggcttccgctaag
atcaggtgggcggactgcctgtccggtgcaggcggcgaactgaaggtggcgctgctgctg
cagaacaacaccgtcgagacgtacagcctgaagacttcagacgaaaacccctcggccaat
aagacggctcgcctgacgctgggcggccatcgcaccgacgtgcgcacgctggccttcagc
tcggacaacctggccgtcctctctgcctccggagacacggtcaaagtgtggaacaggtcg
accctgcaggtgattcgcaccatgacctgtgagtacgctctctgctcgctctttgtgccc
ggagacagacagatcatcctgggaacgaagagcgggaagctgcagatctttgagctggcc
tcaggcagcctcctggaaacgtcggacgcccacgatggagccgtgtggtccctctgtctg
gctccagaccagagagggatcgtcaccggaggcgcagacaagacggtgaagttctgggag
ttcgagctgatcaaagaccagtcgagcgctcagaagaggctggcggtcaaacacgtccgc
actctgcagctggaggacgacgttctgtgcgtgaggttctctccggaccaccggctgctg
gcggcgtctttgctggattgcaccgtcaagatcttccacagcgacacgctgaagttcttc
ctgtcgctgtacggacacaagcttcctgttctctgtctggacatctcgcatgacagcacg
ctcatcgccaccggctccgctgacagaaacgtgaagatttgggggctggactttggcgac
tgccaccgctccctgttcgctcacgacgacagcgtcatgttcctccagtttgtgcccaag
actcatctgttcttcacggcagggaaggaccggaagatcaagcagtgggacgccgacaag
ttcgagctggtccagacgcttgagggtcaccatcgggaggtctggtgtctcgccatcagc
cccaacggagaccacctggtgtcggcgtctcatgacaagtccctgcggctgtgggagagg
acccgggagcccatcatcctggaggaggagcgggaaatggagagggaggcggagtttgag
gagagcgtggctaaaggagacgcgcccgtggttcccggagaggtggagggggaggcggcg
ccggcggcgaagaagacagtggaaacggtcaaagcggctgagcgaatcatggaggctctg
gagctccacagggaggagctcaggaagatggaggagcacaaatacgcctgtgagggcgcc
ggcaaacagctccctcctccaaagcccaaccccgtcctggtggcgtttggaaacgtctct
ccggcccgctacgttctggatgtgatcaaggcggtgagatccagtgagctggaggtttcc
ctgctggtgcttccgttcccatacgtccccgagctgctgcagcttttcagcagctacatc
caccaggggctggaggtggagctcgtctgccgctgcctgttcttccttctcaagatccat
tttggtcagatcaccagtaaccagatgctgctgtccgtcatcgacgacctgcacagcgtc
accgtgtcaaaagtctgtgagatcagagacgtgatgggcttcaacagcgccgccctgcag
ttcctccagcgccagatcgagagtcaagagaacgtgacgttctttgctgaggccacgggg
cgactggaggagaagaagaagaggaggaggaagagggagagagccgtcctgaccatcgcc
taa

DBGET integrated database retrieval system