Oryzias latipes (Japanese medaka): 101159489
Help
Entry
101159489 CDS
T02443
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04120
Ubiquitin mediated proteolysis
ola04137
Mitophagy - animal
ola04144
Endocytosis
ola04340
Hedgehog signaling pathway
ola04350
TGF-beta signaling pathway
ola04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101159489
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
101159489
04350 TGF-beta signaling pathway
101159489
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101159489
04137 Mitophagy - animal
101159489
09144 Cellular community - eukaryotes
04520 Adherens junction
101159489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101159489
04121 Ubiquitin system [BR:
ola04121
]
101159489
03029 Mitochondrial biogenesis [BR:
ola03029
]
101159489
Enzymes [BR:
ola01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
101159489
Membrane trafficking [BR:
ola04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
101159489
Autophagy
Mitophagy
Other mitophagy associated proteins
101159489
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
HECT type E3
101159489
Mitochondrial biogenesis [BR:
ola03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
101159489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
101159489
NCBI-ProteinID:
XP_023816120
LinkDB
All DBs
Position
1:complement(30826438..30867365)
Genome browser
AA seq
795 aa
AA seq
DB search
MSNQGVRRNGPVKVRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVRNTLDPK
WNQHYDLYIGKADSITISVWNHKKIHKKQGAGFLGCVRLLSNTINRLKDTGYQRLDLNKL
GPNDNDTVRGQIVVSLQSRDRIGTGGPVVDCSRLFDNDLPDGWEERRTTSGRIQYLNHIT
RTTQWERPTRCPEAVRDGEETGNGDKYRPASEYSSPSGRPSSCVVDENTPVMTPVNGAVA
SCPLGEQRVQERRVRSQRHRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTW
HDPRVPRDLSNVNCEELGPLLPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLN
SPSPNGSRVAMDSQNTNLSSNQSQLKDQGGPVGPPQALSPAQLPEEAECLTVPKYKRDLV
QKLKILRQELSQHQPQAGHCRIEVSREEIFEESYRQVMKMRPKDLWKRLMIKFRGEEGLD
YGGVAREWLYLLSHEMLNPYYGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGLA
VFHGHYIDGGFTLPFYKQLLGKPITLDDMESVDPDLHNSLVWILGNDITGVLDHTFCVEH
SAYGEIIPHELKPNGKSISVTEDTKKEYVRLYVNWRFLHGIEAQFLALQKGFNEVIPQHL
LKAFDEKELELIVCGLGKIDIVDWRSNTRLKHCTTDSNIVKWFWKAVESFDEERRARLLQ
FVTGSSRVPLQGFKALQGAAGPRLFTIHQIDANANNLPKAHTCFNRIDIPPYESYEKLYD
KLLTAIEETCGFAVE
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccaaggagtccggagaaatggcccagtgaaggtgcggttgacagtgttgtgt
gcaaagaacctggcaaagaaagacttctttcggttgccagatccctttgccaaagtggtt
gtggatggctcaggacaatgtcactctacagacactgtgagaaatactcttgacccaaag
tggaatcaacattatgatctttacattggaaaggcagactccatcaccatcagtgtatgg
aaccataagaagattcacaaaaagcaaggtgcaggttttcttggctgtgtccgcctcctg
tccaacacaatcaacagacttaaagacacaggctatcagagacttgatcttaataagctg
ggccccaacgacaacgacactgtgagaggacagatagtagtaagtctacagtccagagat
cgtattgggactggaggacctgtggtggactgcagtcggctgtttgacaacgacttacct
gatggttgggaggaaagaaggacgacatctggaaggatacagtaccttaaccacatcacc
cgtaccacccaatgggagagacctaccaggtgtcccgaagcagtgagggatggggaagag
acaggaaatggtgacaaataccgacctgcatcagagtactctagcccatcagggcgcccc
tccagctgtgtggttgatgagaacactccagtcatgacacctgttaatggggctgtggcc
agctgccctcttggtgaacaacgggtccaggagagacgggttcggtcacaacggcatcgg
aactacatgagtcgtacacatcttcatacgccacctgacctgcctgagggctatgagcaa
agaacaacccagcaaggccaggtctacttcctccacacccagactggagtaagcacgtgg
catgaccctcgggtgcccagggacttgagcaatgtgaactgcgaggaactgggcccgctg
ctccccggctgggagatccgaaacactgccacgggccgggtctactttgttgatcacaac
aatcgaacaacgcagttcacagacccacggctgtctgcaaacctgcatctggttctcaac
agcccgagtccaaatggttcccgtgtggccatggacagccaaaacactaacctcagcagc
aatcagtctcagctgaaagaccagggcggtcctgttggccctccccaggctctgtcccca
gcccagctcccagaggaggcagagtgtctgacggttcccaaatacaagagagacctggtg
cagaagttgaagatcctgagacaggaactgtcacagcatcagccgcaggccggccactgc
cgcatcgaggtcagccgggaggaaatctttgaggaatcctatcgacaagtgatgaagatg
cggccaaaggatctttggaaacggctgatgatcaagttcagaggggaagaaggtctagat
tatggaggagttgcgagggagtggttgtatctgctgtcacatgagatgctgaacccgtac
tatgggctgttccaatactccagagatgacatctacacccttcaaatcaacccagactct
gctgtcaaccctgagcacctgtcctacttccattttgtgggccgcatcatgggcctggct
gtgttccacggccactacatcgatggaggcttcacgctgcccttctacaagcagctgctg
ggaaaacccatcacgctggacgacatggagtctgtggaccccgaccttcacaacagcctc
gtctggattctaggaaatgacatcactggagtcctggaccacaccttctgtgtggaacac
agcgcctacggggaaattatcccacatgagctcaagccaaacgggaagagcatctctgtg
acagaggacaccaagaaggagtatgtcaggttgtacgtgaactggcgtttccttcatggc
atcgaggctcagtttctggccctgcagaaaggtttcaacgaggtcatcccacagcacctc
ctcaaagctttcgacgagaaggagttggagctcatcgtctgcggcctgggcaagatcgac
atcgtggactggaggtccaacacccgtctgaagcactgcaccacagacagcaacatcgtc
aaatggttctggaaagccgtggagtcatttgatgaggaaaggagggctcggctgctgcag
tttgtaaccggctcctctagagtccccctgcaaggcttcaaggctttacaaggtgctgca
ggacccagactcttcacaatccatcagattgatgccaacgccaacaatctgcccaaagcg
catacctgtttcaaccggatcgacatccccccctacgagagctacgaaaaactctacgac
aagctactgaccgccatcgaggagacgtgtggctttgcagtggaatga
DBGET
integrated database retrieval system
