Oryzias latipes (Japanese medaka): 101159499
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Entry
101159499 CDS
T02443
Symbol
ddb2
Name
(RefSeq) DNA damage-binding protein 2
KO
K10140
DNA damage-binding protein 2
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03420
Nucleotide excision repair
ola04115
p53 signaling pathway
ola04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101159499 (ddb2)
09124 Replication and repair
03420 Nucleotide excision repair
101159499 (ddb2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
101159499 (ddb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101159499 (ddb2)
03400 DNA repair and recombination proteins [BR:
ola03400
]
101159499 (ddb2)
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
101159499 (ddb2)
DNA repair and recombination proteins [BR:
ola03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
101159499 (ddb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_C
EIF3I
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
101159499
NCBI-ProteinID:
XP_020559679
UniProt:
H2LQL1
LinkDB
All DBs
Position
6:complement(16127830..16133543)
Genome browser
AA seq
488 aa
AA seq
DB search
MKRRKNTKPGENGPKSQVKKRTEADSGASLSKKLKEKIEVKTSEPERPPVKPHTAQRRNG
HNSILHYIYRNSLGQSLHSQMRQCLQEPFVRSLSAYHFHGATSPFDRRITCLEWHPTHPT
TLAAASKGGDIFLWDFEKPTKKSFIQGNGAGDFIGGMKFCPTDSSRVYVATGEGKLTLQS
FEGHPPTLLSKTQDCDHNHHNLCVWFCCVDVSVSRQTLVTGDNMGELLLVSLNGQKIFSE
KLHKGKVTHAEFNPRCDWLLATASVDRTVKLWDLRNMKDRKSFLYEMPHERPVNSAYFNP
LDCTKLLTTDQQDQIRVYSSCDWSKPQQIIQHPHRQFQHLTPIKATWHPTYDLVVAGRYP
DDRICSGDQRTIDIYDSNTAELVYQLYDATALGIKSINKFSPMGDVIGSCMGVTVLVWDH
DNSLVSGQHNPKEESSAVDPRRQQRRSQQRSSRERKTPTLEPKLKKKLASLEETETKTKT
GCSKKKKT
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaggaagaacacgaaaccaggtgaaaatggaccaaagagtcaagtgaaaaaa
agaactgaagcagactctggagcatcactctccaaaaaattaaaggaaaagatagaagtg
aagacctctgagccagagcgtccacctgtcaagccccatacagctcagaggagaaatggc
cataacagcatcctgcactacatttacaggaacagtctaggccaaagtctgcattctcag
atgagacagtgtcttcaggagccctttgtccgctctctctccgcctatcatttccatggt
gctaccagccccttcgatcgcagaatcacctgtctggagtggcaccccacccatcccacc
acactagcagcagcctccaaaggtggagacatctttctctgggactttgaaaagcccaca
aagaaaagcttcatccaagggaatggagccggagacttcattggagggatgaagttctgc
cctacagactcctccagagtgtatgtggcaaccggtgaggggaaactgaccctgcagagc
tttgaaggccacccacctaccctgctgtccaaaacgcaagactgtgaccacaatcatcac
aatctttgcgtttggttttgctgtgttgacgtgtctgtgagccgacagacgctcgtcacg
ggggacaacatgggagagctgttactcgtcagtttgaacggccaaaagattttcagtgag
aagttgcacaaaggcaaggtgacccatgcagagtttaacccccgctgcgactggttgctg
gcgactgcttccgtcgatcggacggtgaagctttgggacttgaggaacatgaaggacaga
aagagtttcctgtacgagatgcctcatgaaaggcctgtcaactcagcttatttcaaccct
ttggactgcaccaagctgctcactacagaccaacaggaccagatccgagtgtactcatcc
tgtgattggtcaaagcctcagcaaatcatccagcacccacacagacagtttcagcacctc
acccccatcaaggccacatggcatcctacgtatgacctcgttgttgctggacgttaccct
gacgaccgcatctgctctggtgaccagaggaccattgacatctatgactccaacactgca
gagctggtttatcagctgtatgacgccactgctttaggaatcaagtctataaacaaattc
agcccaatgggtgacgtgattggatcttgtatgggtgtgacggtgctggtctgggaccac
gataattctctagtcagcggtcagcacaatccgaaggaggaatcctctgctgttgatccg
aggaggcagcagcggaggagccagcagcgctccagcagggaaaggaagacgccgactttg
gagccaaaacttaagaaaaaactagcttctctggaagaaactgagaccaagactaaaacc
ggatgttccaagaaaaagaaaacgtag
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