Oryzias latipes (Japanese medaka): 101159589
Help
Entry
101159589 CDS
T02443
Symbol
grin2c
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04020
Calcium signaling pathway
ola04080
Neuroactive ligand-receptor interaction
ola04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
101159589 (grin2c)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
101159589 (grin2c)
04082 Neuroactive ligand signaling
101159589 (grin2c)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ola04040
]
101159589 (grin2c)
Ion channels [BR:
ola04040
]
Ligand-gated channels
Glutamate (ionotropic)
101159589 (grin2c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
NMDAR2_C
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
101159589
NCBI-ProteinID:
XP_023813032
LinkDB
All DBs
Position
8:complement(1212130..1271517)
Genome browser
AA seq
1401 aa
AA seq
DB search
MGVHRGCWSDSLWWPPLLLLFCNAHITTGRPFGFPTPSVNVAVVFSGPAYQTEIKGRLSR
ENFIDLPLEVNPITVLVNNTNPRALLTRICDTLSTNRVHGVVFEDNVGSEAVAQILDFIS
TQTAVPIVGISGGSAVVLPYKGEGSNFLQLGSSIEQQINGMFKVMEEYNWDSFVVVTSMY
PGYETYVDYIKSFTDTSYFMWDLQDVLTFEMSADSTNDIRARRLLQQIDAQVILVYCSHE
EAQYLFSLASEVGLVGPGYIWIIPSMAVGNPDIPPPDSFPVGLISIITDRWRMSLRKRVR
DGVAIVVKGVQSFRKERGFIPEGHSDCHNPVKPSVINDTLFRHMLNVTWEHNDFSFNSNG
YLVNPAMIIITLDRERQWDKVGTYEVGILQMRYPVWPRFGSYLEPVSDYRHLTVATLEER
PFVIVEAVDPATGTCVSNTVPCRRQSNKTETIVGHTEPYTKLCCKGFCIDILKKLARTIK
FSYDLYLVTNGKHGKLVRGIWNGMIGEVFYKRADMAIGSLTINEERSEIIDFSVPFVETG
ISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFVFEYCSPVGYNRSLVTAK
DPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANLAAF
MIQEQYIDTVSGLSDKKFQKPQEQYPPFRFGTVPNGSTERNIRSNYPEMHAHMVKYNQKG
VEDALNSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDSSWK
RPIDLALLQFLADGDTQKLQTVWLTGICRNEKKEVMSSKLDIDNMAGVFYMLLVAMGLSL
LVFAWEHLLYWKLRHSDRKSERLDFLLAISRGIYSCFNGVEHADRSVSMQSPDVTTNYTQ
ANMLKMLKTAKDMVSSARVDNSLDSATKTIENWSRRGADNMRASLPPRVATTDMSHLAYM
PSITDNHSPYPQRAINPNFPVHYGDSCTQPLLEKPKVVTRPTPLRYTLPARNSQHVLERT
LPISSLSSPHIAMRDPASSGTPNLHHPGRVYVENQTRPPMSPYLPYRNLQVPEVYVEHRG
PLRRKFSYPPDCVSRRRRSFSCLFDAPDPRLRSDYDQPRPGFAELRPNHLLNNHPPDPGL
TCAAAHYARGSPSCNSCMKSYLEPETDDIPLLGKDKLNRRASFLQATWGNDRVRQVDETK
PSTSPSARADMPDLFPRLAGPNPKPHKLYGSLGHNLSCYPVAAEPAYLDPAHMGSYPYKQ
KLQFSDSTRLPSYREAILQNAAALRRSSSTVVHRHYSTYLNSYTDLPVYVGPLAQGPSQF
YNTPKDVCHLFPCNSHYSDSASMLPRMGDRPLVYHNSMFGTCDAAKREELGSVGRERRPV
LVARPYVPKPWGRVSSLESEV
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttcatcgaggctgctggagcgactccctgtggtggccgccgctgctgctgctg
ttctgcaacgcccacatcactacaggacgaccctttgggttccccacgccctctgtgaac
gtggccgtggtgttcagcggtccagcctaccagaccgagattaaggggcgtctgagtagg
gaaaacttcattgacctgcccctggaggtgaaccccatcactgtgctggtcaacaacacc
aacccacgtgcgctgctcacacgcatctgcgacacgctctccaccaaccgcgtccatggc
gtggtgttcgaggacaacgttggctccgaggccgtggctcagatcttggacttcatttcc
actcagactgccgtgccgattgttggaattagtggaggatctgccgttgtcctgccatac
aagggtgaaggctccaacttcctccagctgggctcctccatcgagcagcagatcaacggt
atgttcaaggtgatggaggagtacaactgggacagcttcgtggtggtgaccagcatgtac
cccggctacgagacctacgtggattacatcaagtccttcactgacaccagctacttcatg
tgggaccttcaggacgttctgaccttcgagatgtctgccgacagcaccaacgacatccga
gcgcgcagactgctgcaacagatcgatgcccaggtgatcctggtctactgctcccacgag
gaggcccagtacctgttctccttagcctccgaggtggggctcgtggggccaggctacatc
tggattattcccagtatggctgtggggaaccctgatatccccccacctgacagcttcccc
gtggggctcatcagcatcatcacggaccgctggaggatgagtctgaggaaaagggtgcgg
gacggggtggccattgtggtgaaaggggtccagagcttccggaaagaaagaggattcatt
cctgaaggccacagcgactgtcacaaccccgtcaagccgtcagtcatcaacgacacactg
ttcaggcacatgctgaacgtaacatgggaacacaacgacttctccttcaacagcaacgga
tacctggtgaatccggccatgatcataatcactctggacagagagaggcagtgggacaag
gtggggacctatgaggtgggcatcctgcagatgagataccctgtgtggccgcggttcggc
tcctacctggagccggtgtcggattacaggcatctgaccgtcgccaccctggaggagcga
cccttcgtcatcgtggaggcggtggaccctgccacgggtacttgtgtgagcaacaccgta
ccctgccgacggcagtccaacaagacggagaccatcgtcggtcacaccgagccctacacc
aaactctgctgcaaaggcttctgcatcgacatcctgaagaagctggcccgcaccatcaag
ttctcctacgacctctacctggtcaccaacggcaagcacggcaagctggtgcggggaatc
tggaacggaatgatcggagaggtgttctacaagcgggctgacatggccatcgggtctctg
accatcaacgaagagcgctcagagatcatcgacttctcagtgccctttgtggagaccggc
atcagtgtgatggtggccaggagcaacgggaccgtgtctccgtctgcgtttttagaaccg
tacagtccagcggtgtgggtgatgatgttcgtcatgtgcctgacagtcgtggccatcaca
gtctttgtctttgaatactgcagtccggttgggtacaaccgcagcctggtcaccgccaaa
gatcctggggggccaaccttcactatcgggaagtcggtgtggttgctgtggggaatcgtc
ttcaacaactccgttcccatcgaaaacccgaagggcaccacgagtaagatcatggttctg
gtttgggcgttctttgccgtcatcttcttggcgtcctacacggccaacctggccgccttc
atgatccaggagcaatacatcgacaccgtgtccggactgagcgacaaaaagtttcagaag
ccgcaggagcagtacccgccattccgcttcgggaccgtcccaaacggcagcacggagcgc
aacattcggagcaactatccggagatgcacgcccacatggtcaaatacaaccaaaagggg
gtggaggacgccctcaacagcctcaaaaccgggaaactggacgccttcatctacgacgcc
gccgtgctgaactacatggccgggaaagacgaaggctgcaagctagtgaccattggcagc
gggaaagtgttcgccaccaccggttacggcatcgccctgcagaaggactccagctggaag
aggcccatcgacctggctctgctgcagttcctcgcagacggcgacacacagaagctgcag
accgtctggctcacgggaatctgccgcaacgagaagaaagaggtcatgagcagcaagctg
gacatcgacaacatggcgggagtcttctacatgctgctggtggccatgggcctgagcctg
ctggtgttcgcctgggaacatctgctctactggaaacttcgccattctgaccgcaaatcc
gagcgcctggacttcctcctcgccatcagcagaggcatctacagctgcttcaacggcgtg
gagcacgccgaccgcagcgtgagcatgcagagcccggacgtcaccaccaactacacgcag
gccaacatgctgaagatgctgaagacggccaaggacatggtgtcgtccgcgcgggtggac
aactccctggacagcgccaccaaaaccatcgagaactggagcaggcgcggcgccgacaac
atgcgggcaagcctgccccccagggtcgcaaccactgacatgagccatctggcctacatg
cccagcatcaccgacaaccactcgccgtacccccagagggccatcaaccccaacttcccg
gttcattacggggacagctgcacccagccgctcctggaaaagcccaaagtggtgacccgg
cccacgccgctgcgatacacgctgcccgcccgcaacagtcagcacgtcctggagagaact
ctgcccatctccagcctcagcagcccccacatagccatgagggaccccgcttcttcaggg
acaccaaacctacaccaccctggcagggtgtacgtggagaaccaaacacggccccccatg
tccccctatcttccttacaggaacttgcaggtgcccgaggtctacgtggagcacaggggg
cctctaaggaggaagttcagctacccccccgactgcgtgagccgcaggaggaggtccttc
agttgcctgtttgacgcccccgacccccgactgcgatcagactacgaccagccgcggccg
ggcttcgcagagttgaggcccaaccacctgctgaacaaccacccccccgaccccggcctg
acctgcgctgctgctcactacgccaggggcagccccagctgcaactcctgcatgaagtcc
tacctggagcccgaaacggatgacattccactcctggggaaggacaaactgaaccgccgc
gcctccttcctccaagccacctggggcaacgacagagtccggcaggtggatgaaaccaag
ccctccacgtctccctccgcccgagcagacatgcccgacctgtttccccgcttggcgggg
cccaacccaaagcctcacaagttatatggcagtctggggcacaacctgtcctgctacccc
gtggcggcagagccggcctacttggaccccgcccacatggggtcttacccctacaagcaa
aagctccagttctccgattccacccggctgccctcctaccgggaagctattctgcaaaac
gccgctgctctgcgccgctcgtcctccacggtggtgcacagacattactccacctacctg
aactcgtacacggacttaccggtgtacgtggggccgctggcacagggcccttcccagttc
tacaacacccccaaggacgtgtgccacctgtttccctgcaacagccactattcggacagc
gcctccatgctgccccgcatgggcgacaggccgctggtttaccacaacagcatgtttggg
acctgcgacgccgccaagagggaggagctgggctctgtgggcagggagcgcaggccggtg
ctggtggcacgtccctatgtgccaaaaccctggggcagggtgtccagcctcgagtctgag
gtctga
DBGET
integrated database retrieval system
