KEGG   Oryzias latipes (Japanese medaka): 101159654
Entry
101159654         CDS       T02443                                 
Symbol
pdgfc
Name
(RefSeq) platelet-derived growth factor C
  KO
K05450  platelet derived growth factor C/D
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola04010  MAPK signaling pathway
ola04020  Calcium signaling pathway
ola04510  Focal adhesion
ola04518  Integrin signaling
ola04540  Gap junction
ola04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:ola00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    101159654 (pdgfc)
   04020 Calcium signaling pathway
    101159654 (pdgfc)
  09133 Signaling molecules and interaction
   04518 Integrin signaling
    101159654 (pdgfc)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    101159654 (pdgfc)
   04540 Gap junction
    101159654 (pdgfc)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    101159654 (pdgfc)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ola04052]
    101159654 (pdgfc)
Cytokines and neuropeptides [BR:ola04052]
 Cytokines
  Growth factors (RTK binding)
   101159654 (pdgfc)
SSDB
Motif
Pfam: CUB PDGF
Other DBs
NCBI-GeneID: 101159654
NCBI-ProteinID: XP_011471439
UniProt: A0A3B3HW26
LinkDB
Position
10:1718226..1776722
AA seq 342 aa
MSLSLILLLASLLQQYGAGAESSHVIKSHLPGVKELNGVQDSLQEKVITVSGEGTIHSPD
FPHTYPRNIELVWRLVATNNTRIQLTFDDRFGLEDPEDGICKYDFVEIKDLAEKGLPGRW
CGSAPVPTSIISRGSQIVIRFLSDEYFPSEPGFCIHYSLQSMSTSEPELLAAPPSSMQNM
EELSEAVAGLSTVEEVMRYLEPEQWQLDMEELYKPSWHVLGKSFIHNKKPRGGADLNLLR
EEVRLYSCTPRNFSVVLREELKRTDAIFWPSCLLVKRCGGNCACCSQRCFSCQCSPARVA
KKFHEVLVLKHRGGGRGLQKSLTDVPLEHHEECSCACREDSD
NT seq 1029 nt   +upstreamnt  +downstreamnt
atgagcctgtcattaatactcctgctcgcatcgcttctccaacagtatggcgcgggagct
gagtccagtcacgtcatcaagtctcaccttccaggtgtgaaagagctaaacggagttcaa
gattcccttcaggaaaaggtcataacagtgtctggagagggaacaatccacagcccagac
ttcccacacacctatcccaggaatatcgagttagtctggagactggtggccactaacaac
acgaggatccaactcacatttgatgacaggtttgggctggaggaccctgaagatggaata
tgcaagtacgacttcgtagagatcaaggatctggctgagaaggggctcccaggtcgctgg
tgtgggtcggcgccggtgccaacaagtatcatttccagaggcagccagattgttattcga
ttcctttctgatgagtactttccatccgagccagggttctgcatccactactcccttcag
tctatgagtacatcagaacctgagctccttgcggctcctccctcctccatgcagaatatg
gaggagctctcagaggctgtggctgggctgagcaccgtggaggaggtcatgaggtacctg
gagccagagcaatggcagctggacatggaggagctgtacaaaccttcgtggcatgtgctg
gggaagtcattcatccacaacaagaagccccgaggaggagctgatctgaatttgctgagg
gaagaagttcgactgtacagctgcactccgcgcaacttctctgtggttttgcgtgaagag
ctgaaaagaacagacgccattttctggcccagctgcctcctggtgaagcgctgtggtgga
aactgcgcctgctgctctcagcgctgcttcagctgccagtgcagtcctgccagggtcgca
aagaagttccacgaggttctggtgctgaagcatcgagggggtgggagaggcctgcagaag
tccctgactgacgtccccttggagcaccatgaggagtgttcctgtgcgtgcagagaagac
tcggactga

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