Oryzias latipes (Japanese medaka): 101159654
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Entry
101159654 CDS
T02443
Symbol
pdgfc
Name
(RefSeq) platelet-derived growth factor C
KO
K05450
platelet derived growth factor C/D
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04010
MAPK signaling pathway
ola04020
Calcium signaling pathway
ola04510
Focal adhesion
ola04518
Integrin signaling
ola04540
Gap junction
ola04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
101159654 (pdgfc)
04020 Calcium signaling pathway
101159654 (pdgfc)
09133 Signaling molecules and interaction
04518 Integrin signaling
101159654 (pdgfc)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101159654 (pdgfc)
04540 Gap junction
101159654 (pdgfc)
09142 Cell motility
04810 Regulation of actin cytoskeleton
101159654 (pdgfc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ola04052
]
101159654 (pdgfc)
Cytokines and neuropeptides [BR:
ola04052
]
Cytokines
Growth factors (RTK binding)
101159654 (pdgfc)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
Motif
Other DBs
NCBI-GeneID:
101159654
NCBI-ProteinID:
XP_011471439
UniProt:
A0A3B3HW26
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Position
10:1718226..1776722
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AA seq
342 aa
AA seq
DB search
MSLSLILLLASLLQQYGAGAESSHVIKSHLPGVKELNGVQDSLQEKVITVSGEGTIHSPD
FPHTYPRNIELVWRLVATNNTRIQLTFDDRFGLEDPEDGICKYDFVEIKDLAEKGLPGRW
CGSAPVPTSIISRGSQIVIRFLSDEYFPSEPGFCIHYSLQSMSTSEPELLAAPPSSMQNM
EELSEAVAGLSTVEEVMRYLEPEQWQLDMEELYKPSWHVLGKSFIHNKKPRGGADLNLLR
EEVRLYSCTPRNFSVVLREELKRTDAIFWPSCLLVKRCGGNCACCSQRCFSCQCSPARVA
KKFHEVLVLKHRGGGRGLQKSLTDVPLEHHEECSCACREDSD
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgtcattaatactcctgctcgcatcgcttctccaacagtatggcgcgggagct
gagtccagtcacgtcatcaagtctcaccttccaggtgtgaaagagctaaacggagttcaa
gattcccttcaggaaaaggtcataacagtgtctggagagggaacaatccacagcccagac
ttcccacacacctatcccaggaatatcgagttagtctggagactggtggccactaacaac
acgaggatccaactcacatttgatgacaggtttgggctggaggaccctgaagatggaata
tgcaagtacgacttcgtagagatcaaggatctggctgagaaggggctcccaggtcgctgg
tgtgggtcggcgccggtgccaacaagtatcatttccagaggcagccagattgttattcga
ttcctttctgatgagtactttccatccgagccagggttctgcatccactactcccttcag
tctatgagtacatcagaacctgagctccttgcggctcctccctcctccatgcagaatatg
gaggagctctcagaggctgtggctgggctgagcaccgtggaggaggtcatgaggtacctg
gagccagagcaatggcagctggacatggaggagctgtacaaaccttcgtggcatgtgctg
gggaagtcattcatccacaacaagaagccccgaggaggagctgatctgaatttgctgagg
gaagaagttcgactgtacagctgcactccgcgcaacttctctgtggttttgcgtgaagag
ctgaaaagaacagacgccattttctggcccagctgcctcctggtgaagcgctgtggtgga
aactgcgcctgctgctctcagcgctgcttcagctgccagtgcagtcctgccagggtcgca
aagaagttccacgaggttctggtgctgaagcatcgagggggtgggagaggcctgcagaag
tccctgactgacgtccccttggagcaccatgaggagtgttcctgtgcgtgcagagaagac
tcggactga
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