Oryzias latipes (Japanese medaka): 101159770
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Entry
101159770 CDS
T02443
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04517
IgSF CAM signaling
ola04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
101159770
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101159770
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ola04812
]
101159770
Cytoskeleton proteins [BR:
ola04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
101159770
Intermediate filaments
Intermediate filament-binding proteins
101159770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
Motif
Other DBs
NCBI-GeneID:
101159770
NCBI-ProteinID:
XP_023818911
LinkDB
All DBs
Position
15:complement(10130072..10252353)
Genome browser
AA seq
2358 aa
AA seq
DB search
MEFQNASGALSGPLSPLSPTSDYGGPGPSHGASLGPSLSPSRGPSPDPAHTGASAAFNYN
QLEGRFKQLQDEREAVQKKTFTKWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVLSGER
LPKPTKGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQI
QDISVETEDNKEKKSAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDL
IDFDKLKKSNAHYNLQNAFNLAEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSK
MKALKVEGKRIGKVLDHAIETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQ
QLQAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYTPREGKLISDINKAWERL
EKAEHERELALRTELIRQEKLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEA
ATKKHEAIETDIAAYEERVQAVVSVAKELEAESYHDIKRITARKDNVNRLWEYLLELLKA
RRHRLEQNLGLQRVFQEMLYIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAI
QADRVRNVNSNAQRFASDTEGYKPCDPQIIRDRVAHLEFCYQELIQLAAERRARLEESRR
LWKFFWEMAEEEGWIREKEQILSSEDYGKDLTGALRLLSQHKAFEDEMSGRAAHLQQTIK
QGEDLVADNHFGADKIRERIRDIQEQWATLERLTAVRKSRLQEACNHHQFQADADDIDTW
MLDVLRIVSSVDVGHDEFSTQALVKKHKDVAEEIDSYRPVIEALHDQSRTLPPEKANSEE
VKSRLAGIEERYKEVAELTRLRKQALQDALALYKMLSEASACELWIDEKEQWLNSMDIPE
KLEDLEVVQHRFESLEPEMNSQASRVAVVNQVARQLIHCGHPSEKEIKAQQDKLNTRWSQ
FRDLVDQKKESLVSALGVQNYHLECNETKSWIKEKNKLIESTQELGNDLAGVMALQRKLT
GMERDLVAIEDKMGDLGKEAERLASEHPEQSEAIKGRLAEITGVWQEMKDGLKNREESLG
EASKLQQFLRDLDDFQSWLSRTQTAIASEDMPNTLAEAEKLLAQHENIKNEIRNYEEDYQ
KMRDMGEMVTQGQTDAQHMFLRQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTK
QAEAFLNNQEYVLAHTEMPTTLEAAEAAIKKQEDFMTTMDANEEKISNVVDTGRRLVADG
NVSSERIQEKVDSIDQRHKKNRQAASDLLMRLKDNRDLQKFLQDCQELNLWINEKMLTAQ
DMTYDEARNLHSKWLKHQAFMAELQSNKEWLDKISKDGQTLMTEKPETEGVVKEKLASLK
TMWEELESTTQTKAKCLFDANKAELFTQSCADLDKWLNGLEGQLQSDDFGKDLTSVNILL
KKQQMLESQVEVRQKEVDELKGQSQALRQEGKDSDEVDGQRIIVEKKFQTLQEPLKKRRD
KLMASREIHQFNRDVEDEILWVEERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQP
RYDDIFERSQHVLREGSPTAELIRQRLAELQSLWEQIKKETEKRHTRLSEAHEAQQYYFD
AAEAEAWMSEQELYMMSEEKAKDEQSAVAMLKKHQILEQAVEDYADTVHQLSSTSRGLVA
AGHPDSERIGMRQSQVDKLYAGLKDLSEERRGKLDERFRLFQLNREVDDLEQWIAEREVV
AGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDGVNRLADELINSGHGDAATIAEWK
DGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEVLNRILDKHKKLPEELGRDQNTVE
ALQRMHTAFEHDIQALGTQVRQLQDDAVRLQSAYAGDKADDIQKREGEVLEAWKNLLAAV
EGRRAKLVDTGDKFRFFSMVRDLMLWMEDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEI
DARNDSFTTCIELGKALLARKHYASEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLVLEVH
QFSRDAGVAEAWLLGQEPYLSSREIGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLT
TMELLEVRRRQEEEERRRQPEAQTAEGAAQSRDELLSQNGLPTEQEAPRDNGEGGEVVNG
VSEPSPSGSPGASRKAKSSQAATLPAKSQQDGPTSQQEGFLHRKHEWEGHNKKASSRSWN
NVYCVINQQEMGFYKDQRSAGQGIPYHSEIPVSLKDAVCEVALDYKKKKHVFKLKISDGN
EYLFQAKDDEEMNLWISTISGAISGDKPEVTPSSHSTPAQAARAQTMPAAVATTTAESSP
GKREKDKEKRFSLFSKKK
NT seq
7077 nt
NT seq
+upstream
nt +downstream
nt
atggaatttcagaacgcttccggcgccctcagcgggccgctctcacccctctcccccacc
tcagattacggtggccccggcccctctcacggggccagcttgggccccagcctcagcccc
tccagagggcccagccccgaccccgcacacacgggagcctccgctgctttcaactacaac
cagctggagggacgattcaaacagctgcaagatgagcgcgaggctgtgcagaaaaagacc
ttcaccaaatgggtgaactcccacctatccagagtctcctgtcgcattacagacctctac
atggacctgagggatggacgaatgctcatcaagctgctggaggtcctgtcaggagagcgg
ctgcccaaacccacaaagggtcggatgaggatccactgtctggaaaacgtggacaaggct
ctgcagttcctgaaggagcagcgggtccacctggagaacatgggctcccacgacattgtt
gatgggaaccaccgcctcactctggggctgatctggaccatcatcctccgcttccagatc
caggacatcagcgtggagacggaggacaacaaggagaagaagtcggccaaagatgccctg
ctgctctggtgtcagatgaagaccgccgggtatcccaacgtgaacatccacaacttcacc
accagctggagagacggcatggccttcaacgccctcatccacaagcacaggccagacctg
attgactttgacaaactgaagaagtccaacgctcactacaatctgcagaatgccttcaac
ctggccgaacagcacctgggcctcaccaagctgctggaccctgaagatatcagcgtggac
caccccgatgagaagtccatcatcacctacgtggtcacatactaccactacttctccaag
atgaaggccctaaaggtggaggggaagaggataggcaaggtgctggaccatgccatcgag
acagaaaagatgatcgagaagtacgagtcactggcgtctgacctgctggagtggatcgaa
cagaccatcatcatcctcaacaaccggaagtttgccaactcgttggtgggcgtccagcag
cagctgcaggccttcaacacgtaccgcacggtggagaagccgcccaagttcacagagaag
gggaacctggaggttcttctgttcaccatccagagtaagatgagagccaacaaccagaag
gtgtacacgccccgagagggcaaactcatctctgacatcaacaaggcgtgggagcggctg
gaaaaggcggagcacgagcgggagctagcactgaggacggagctgattcgtcaggagaaa
ctggagcaacttgcacgacgcttcgaccgcaaagccgccatgagggagacgtggctgagc
gagaaccagcggcttgtctcacaggacaactttggttttgacctccaggctgtagaagct
gctacgaagaagcatgaagccatagaaacggacatcgctgcgtacgaggagcgagtccag
gctgtggtttccgtagcaaaggagctggaggcagagagttaccacgacatcaaacgcatt
acagcgaggaaggacaacgtgaaccgactgtgggagtacctgctggagctgctgaaggcc
cgcaggcatcggctggagcagaacctgggcctgcagagggtcttccaggaaatgctctac
atcatggactggatggatgagatgaagatgctgctgctgtctcaggattacgggaagcac
ctgctgggcgtggaggacctgctgcagaaacacgctctggtggaggccgacatcgccatc
caggccgaccgcgtccggaacgtcaacagcaacgctcagagattcgccagcgacaccgaa
ggttacaagccctgcgatccccagatcatcagagaccgcgttgctcacctggagttctgc
tatcaggagctgattcagctggcggctgagcggcgagctcgcctcgaggagtcccgccgc
ctctggaagttcttctgggaaatggcggaagaggaaggatggatcagggagaaggagcag
atactttcctccgaggattatgggaaggatctgaccggcgccctgcgtctgctgagtcag
cacaaagcctttgaggacgagatgagcgggcgagccgcccacctgcagcaaaccatcaaa
caaggcgaggacctggtggccgacaaccactttggggctgacaagatcagggaacgaatc
cgagacattcaggagcagtgggcgactctggagcgcctgaccgctgtgaggaaaagccgg
ctgcaggaggcctgcaaccatcaccagttccaggctgatgcggacgacatcgacacctgg
atgctggacgttctgcggattgtctctagcgtcgacgtcggccacgatgagttctccacc
caggccctggtgaagaaacacaaagatgtcgcggaggagattgacagctaccgacccgtc
atcgaggctctgcacgatcagtcgcggacgttgccgccggaaaaagctaactctgaggag
gtgaagagtcgtctggcgggcattgaggagcgctataaggaggtggcagagctgacgcgg
ctcaggaagcaggcgctgcaggacgctctggctctctacaagatgctgagcgaagccagc
gcctgcgagctgtggattgatgagaaggagcagtggctcaacagcatggacatcccagaa
aagctggaggacctggaggtggtccaacaccggtttgagagtttggagcctgagatgaac
agccaggcatcccgggttgccgtggtcaaccaggttgccaggcagctgatccactgcgga
catcccagtgagaaggagataaaagcccagcaggacaaactcaacaccaggtggagccag
ttcagagacctggtggaccagaagaaggagagcctggtctcggcactgggagtccagaac
taccacctggagtgtaacgagaccaagtcctggatcaaggagaagaacaagctgatcgag
tccactcaggagctggggaacgacctggccggcgtcatggctctgcagaggaagctgact
gggatggagcgcgacctcgtggccatcgaggacaagatgggcgacctggggaaggaggcg
gagcgtttggcctccgaacacccagagcagtccgaggccatcaaaggacgtctggctgaa
atcacgggcgtctggcaggagatgaaggacggtttgaagaacagagaggaatctctaggt
gaggccagcaagcttcagcagttcctgcgtgacctggacgacttccagtcgtggctgtcg
cggacgcagaccgccattgcctcggaggacatgcccaacacgctggcagaggcggagaag
ctgctggcccagcacgagaacatcaagaacgagatccgcaactacgaggaggactatcag
aagatgagggacatgggcgagatggtgacgcagggccagacggacgcccagcacatgttc
ctgcggcagcggctgcaggcgctcgacaccggctggaacgagctgcacaagatgtgggag
aaccggcagaacctgctgtcccagtcccacgcttaccagctgttcctcagagacaccaag
caggccgaagccttcctcaacaaccaggagtacgttctggcacacacggagatgcccacc
actctggaggcggcagaggccgccatcaagaagcaggaggactttatgactaccatggac
gccaacgaggagaagataagcaacgtggttgacaccggacgccgcctggttgccgacggc
aacgtcagctctgagcgcatccaggagaaagtggactccattgatcaaaggcacaagaag
aaccgccaggctgccagtgaccttctgatgaggctgaaggacaacagagacctgcagaag
ttcctgcaggactgccaggagctgaatctgtggatcaacgagaagatgctgacggctcag
gacatgacgtacgacgaggccaggaacctccacagcaagtggctgaaacaccaggccttc
atggctgagctgcagtccaacaaggagtggctggataagatcagcaaggacggacaaacg
ctgatgacggagaagcccgagacagagggcgtggtgaaggagaagctggcgtccctgaag
accatgtgggaggagctggagtccaccacgcagaccaaagccaagtgtctgtttgacgcc
aacaaggccgagctgttcacgcagagctgcgccgacctggacaagtggctgaacggcctg
gagggtcagctgcagtccgacgacttcggcaaagacctgacgtccgtcaacatcctcctc
aagaagcagcagatgttggagagccaggtggaggtgcgtcagaaggaggtggatgagctg
aagggtcagtcgcaggccctccgtcaggaggggaaggactcggacgaggtggacgggcag
cggatcatcgtagaaaagaagttccagacgctgcaggagccactgaagaagaggcgggac
aagctcatggcgtcccgtgagatccaccagttcaacagagacgtggaggacgagatcctg
tgggtggaggagcggatgcctctggccacgtctactgaccacggacacaacctgcagacc
gtgcagctgctcatcaaaaagaaccagaccctgcagaaggagattcagggacaccagccc
cgttatgacgacatctttgagcgcagccagcatgtgctgagggaaggcagccccacggcc
gagctgatccgccagcggctcgccgagctccagtccctgtgggagcagatcaagaaggag
acggagaagcgtcacacccgcctcagcgaggcccacgaggcccagcagtattactttgac
gccgcagaggcggaggcctggatgagcgagcaggagctctacatgatgtcggaggagaag
gccaaggacgagcagagtgccgtcgccatgctgaagaagcaccagatcctggagcaggcc
gtggaggactacgccgacaccgtccaccagctgtccagcaccagccgggggctggttgct
gcgggacaccccgacagcgagcgcatcgggatgcggcagtctcaggtggacaagctttat
gccggcctgaaggatttatccgaggaacgtcgggggaagctggatgagcgtttccggctt
ttccagctcaaccgggaggtggacgacctggagcagtggattgcagagagagaagtggtg
gccggatctcacgagcttggacaggactacgagcacgtcacgatgctgcaggagcgtttc
agagaatttgccagagacaccggaaacatcggacaggagcgcgtggacggcgtcaacagg
ctggccgacgagctaatcaacagcggccacggtgacgctgcaaccatcgccgagtggaag
gacggcctgaacgaagcttgggccgacctgctggagctcatcgatacccgcacgcagatc
ctggccgcctcctatgaactccacaagttctaccacgacgccaaggaggtcctcaaccgc
atcctggacaagcacaagaaacttccggaggaactgggccgggaccagaacacagtcgaa
gccctgcagagaatgcacaccgcctttgagcacgacatccaggctctgggaacacaggtc
cggcagcttcaggatgacgccgtccgcctgcagtcggcttatgccggagacaaagctgat
gacatccagaagagagaaggagaggtcctggaggcctggaagaacctgttggcagcagtg
gaaggccggcgggctaagctggtggacaccggagacaagttccgcttctttagcatggtg
cgcgacctgatgctgtggatggaggacgtcatccgcctgatcgaagctcaggagaagccc
agggacgtgtcgtcagtggagctgctgatgaacaaccaccaaggcatcaaggcggagatc
gacgcccgaaacgacagcttcaccacctgcattgagctgggcaaggccctgctggcaaga
aagcactacgcttcagaggagattaaagagaagttgctgcagttaacggataagaggaaa
gagatgattgacaagtgggaggacagatgggagtggctcagactagttctggaggtgcac
cagttctccagggacgcaggggtggcagaggcgtggctactgggtcaagagccctacctg
tccagcagggagatcgggcagagcgtggacgaggtggagaagctcatcaaacgccacgag
gccttcgagaagtcggccgccacctgggaggagcgcttctctgcgctggagaggctgacc
acgatggagttactggaagtgagaagaaggcaagaggaagaagagaggaggaggcagccg
gaggcccagactgctgaaggagcagcgcagagcagggacgagctgctgtctcagaacggg
ctgccaaccgaacaagaggctcccagggataacggtgaaggtggtgaggtggtaaacgga
gtgtcagagcccagtccatcagggtctccgggggcgtctcgcaaggccaagagcagccag
gcggcgactctgccagccaaaagccaacaggacggtcccacgtcccagcaggagggcttc
ctgcaccgcaaacatgagtgggagggtcacaacaaaaaagcctccagcaggtcgtggaac
aacgtgtactgtgtgatcaaccagcaggagatgggtttctacaaggaccagaggagcgct
ggtcagggcattccttaccacagcgagatccctgtcagcctgaaggacgctgtgtgcgag
gtggcgctggactacaaaaagaagaagcacgtctttaaactcaaaatttccgacgggaac
gagtatctgttccaagccaaagatgacgaggagatgaacttgtggatctcaaccatctcc
ggcgccatttcaggcgacaagccagaggtcacgcccagcagccacagcacgccggcccaa
gccgctcgagcgcagacgatgccggccgccgtcgccacgacgacggcagagtccagcccg
ggaaaaagagagaaagacaaggaaaagcgcttcagtctgtttagcaagaaaaaatag
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integrated database retrieval system
