Oryzias latipes (Japanese medaka): 101159930
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Entry
101159930 CDS
T02443
Name
(RefSeq) BDNF/NT-3 growth factors receptor isoform X1
KO
K04360
neurotrophic tyrosine kinase receptor type 2 [EC:
2.7.10.1
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04010
MAPK signaling pathway
ola04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
101159930
04020 Calcium signaling pathway
101159930
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ola01001
]
101159930
Enzymes [BR:
ola01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
101159930
Protein kinases [BR:
ola01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
101159930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
Ig_3
LRR_8
Ig_2
C2-set_2
LRR_5
ig
LRR_4
Haspin_kinase
LSR
Motif
Other DBs
NCBI-GeneID:
101159930
NCBI-ProteinID:
XP_011479854
LinkDB
All DBs
Position
12:complement(8394730..8415019)
Genome browser
AA seq
801 aa
AA seq
DB search
MDSSAGEHGMARSGLFLLLTGLMWRFGGACPESCTCSISRIVCIDSEPGIEDFPVLTLDD
MENITEIYIANQNRLFDLSDSSLRHYINLRNLTVTRTRLTSISSDAFFNNTRLQYVNLRD
NNLSTLSWRTFQNFNITFPLLLSGNPLDCVCENLWIKLKLQEEADSPDLTCTDDRGVTRD
FATLTPPDCVVPTVEVTPQNVTEMEGGNVKAVCSASGSPAPVILWNLDMLSTHYEIDPLD
TESILTLTGLSSDDNGRKIVCSVENMVGQSEATLELNILFPPAILQLLPPERNHHWCIPF
TVTGNPKPELRWYHNNTTLEEQDFIRTIIHEYTENEDHGCLQLVNPTHIHNGKYRLVVKN
EFGQDEKTVSAQFIDPPYFNTTEPEFGYSYPDPSLPPLDDSVAVSDPNLVYVVVGIAGVA
LTGCVLMVIILKYGRNSKFGIKGSSSVISNDDDSASPLHHVSNGNNTPSSSEMGPDAVII
GMTKIPVIENPQYFRNSGSMLKSDTFVKHIKRHNIVLKRELGEGAFGKVFLAECYNLVPH
QEKIHVAVKTLKEASESGRADFYREAELLTNLQHDHIVTFYGVCVESDPLIMVFEYMKHG
DLNKFLRSHGPDAVLMADGQHSILVELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRN
CLVGENLLVKIGDFGMSRDVYSTDYYKVGGHTMLPIRWMPPESIMYRRFTTESDVWSLGV
VLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPKEVYDLMLGCWQREPYMRLNIK
EIYSMLQSLAKASPVYLDILG
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggactccagcgcgggggagcatggcatggctcgctcgggattgtttttgcttttgact
gggctgatgtggaggtttggcggcgcttgccccgaatcctgcacttgcagcatctcaagg
attgtttgtattgattccgagccggggatcgaggatttccccgtcctcacgttggatgac
atggaaaacatcacggagatatacattgccaatcagaacagactatttgacctcagtgac
agcagtctgagacactacatcaacctcagaaatctaacggtaactaggacaagattgaca
tctatatcttcagacgcattttttaacaacacaagacttcaatatgtaaatttaagagac
aacaatctgtcaacgctctcatggagaacatttcagaactttaacattacatttccgctt
cttctgtctggaaatcccctggactgtgtctgtgagaatttgtggatcaaactgaagctc
caagaagaagccgacagcccagatctgacatgcactgatgacagaggagtgacgagagac
tttgctaccctcactcctccagactgcgtggtccccacagtagaagtcaccccccaaaat
gtgacagagatggaaggggggaatgtcaaggcagtgtgcagcgcctcgggctctcctgct
cctgtgatcctgtggaacctggatatgctctcaacccactatgagattgaccctttggac
acagagagcatcctcacgctgacaggcctgtcatcagatgataatggaaggaagatcgtc
tgcagtgtggagaacatggtcggccaatcggaggccaccttagagctcaacatactcttt
ccccccgcaatcctgcaactgctgcctccagagcgaaaccaccattggtgcatcccgttc
accgtgaccggcaacccaaagcctgagctgcgctggtaccacaacaacaccaccctggag
gagcaggacttcatccgcaccatcatccacgagtacactgagaatgaggaccacggatgt
ctgcagctggtcaaccccacccacatccacaacggcaagtacaggctggtggtcaagaac
gagttcggtcaggatgaaaagacggtttcagcgcagttcatcgatcctccttacttcaac
accacagaaccagaatttggctacagctaccctgatccctcacttccccctctggatgac
agtgttgcagtaagtgatcccaatctggtgtacgtggttgttgggattgctggtgtggcc
ctgactggctgtgtcctgatggtgatcatcctgaagtacggaagaaactcaaagtttgga
atcaaaggctcctcctcagtcatcagtaatgacgatgactctgccagccctcttcatcac
gtctccaatggcaacaacaccccgtcgtcctcagagatgggtccagacgcagtgatcatt
gggatgacaaagattcctgtcattgagaacccgcagtacttccgtaactccggcagcatg
ctgaaatctgacacatttgtcaagcacatcaagagacacaacattgtgctgaaacgggag
ctgggcgaaggagccttcgggaaggtcttcctcgctgagtgttacaacctcgtgccccac
caggagaagatccacgtagcggtcaagactctgaaggaggccagcgagagcggccgagct
gacttctacagagaagctgagcttctcaccaacctgcagcacgatcacatcgtcactttc
tatggagtgtgtgtggagagcgacccgctcatcatggtctttgaatacatgaagcacggt
gacctgaacaaatttctcaggtcccatggtcctgatgctgttctcatggcagacggtcag
cacagcatcttggtggagctcactcagtcccagatgctgcacattgctcaacagattgct
gctggcatggtctacctggcctcccagcactttgtccacagagacctggcgacaagaaac
tgcctggtgggagaaaacctgctggtcaaaatcggagactttggcatgtccagagacgtt
tacagcacagactactacaaagtgggcggccacacgatgctgccgattcgctggatgcct
ccagagagcatcatgtaccggcgcttcaccacagagagtgacgtgtggagtctgggagtg
gtgctttgggagatcttcacctacggcaagcagccctggtaccagctctccaacaatgag
gtgattgagtgcatcacacagggccgggttctgcagcgacctcgcacctgtccgaaggag
gtgtacgacctgatgctgggctgctggcagagagagccctacatgaggctgaacatcaag
gagatctacagcatgctccagagtctggccaaagcctctccggtgtacctggacatcctg
ggctga
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