Oryzias latipes (Japanese medaka): 101160037
Help
Entry
101160037 CDS
T02443
Name
(RefSeq) EMILIN-1
KO
K24246
emilin
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ola04990
]
101160037
Domain-containing proteins not elsewhere classified [BR:
ola04990
]
C1q domain-containing proteins
Emilin / mutimerin group proteins
101160037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMI
C1q
Collagen
Baculo_PEP_C
DUF1664
DUF7310
PUMA_CC
Apolipoprotein
DUF16
Laminin_II
ATG16
DUF948
COG3_N
Fez1
DUF6951
Hydro_N_hd
Motif
Other DBs
NCBI-GeneID:
101160037
NCBI-ProteinID:
XP_011490065
LinkDB
All DBs
Position
24:complement(13375130..13404333)
Genome browser
AA seq
1027 aa
AA seq
DB search
MRTLLYLLAFAFFRLCSGLGYVESSIQTGQRAASRHRNWCAYVVTRTVSCVMEDGVETYI
KPDYHRCTWGQCPRVMYRTYRRPRYKVAYKMVTEMEWKCCHGYSGEDCHIGPQVTPDSQG
NGGQPQVTQTSHNTGGGKIGGEDNSEKFRNLEEAIRGLTKDLHSMQTTINGINQRLSDLT
GVVIPADSAQGHMKETIHNIHTKLDHLYNRTQVHDQTLLHINNHLVNGQSNELDSTSGKD
GAILNHHLTTLKEEILTELERRVSLSCSACQVGVEDVRQQQRKDRERIEALEKLINSIDQ
QLRQVSSRESSYQMCCSTVTEVEKKLTDVEVRVTSIADKCDTVKGLLDKELADTGGGKGM
VTEERFNSRLRDLEKRVNNTMRKAEQRCTNTGTSVKDIIQRDLIQLHNTINRRLDDYGHK
IEKTELEVSVLEDTVRDHSRRIGQLENITTFLDRRLTSTTSICNETCGHNGKVSAADNTM
KTLQWKVVSNQEEIRKFNTKLDNLFETGDSLTERVFDLENDIKRVTAITGDNGERFNRIV
TEVETLSRDLQECSICTSVRQDLLFFKNTTTRALNNCLLDITDLQRKVNSREDTCSQVCS
NLQEEVGRLKEEVEKCTGQCKTNMDDLKNRLDGHTFHNGRLGGELKSIQGDLANVFSTFN
SINSTLKGLGRTVKTHGKTLTDLTNSKDRISSEVTNLQEKLTEHIDESKIHFVGLGKEIQ
LIRSNYITEVEGCRQSSEGVDRRLSELEGVCGRLDSFSDSLDRIKDGLNRHVTGLWSCVD
GLNVTVTSHGVMIDNIQNVQLENVHSKIHSLNSSVLDLGRQFRVFTAQDFTGTRGPPGLR
GEKGDRGPQGRIGPPGVVGLPGSRGPQGPPGLRGEQGPAGSDAHVPRLSFSAALTRPMRA
SGTIKFNDVFVNEKQSYNPQTGLFTAPVPGRYFFSGILTGHKNMKIEAVLSKSNVGVARV
DSAGYQPEGLEKPMAETKHIPGALAVFNIILPMEAGDTVCIDLVTGNLAYSSEPLTIFSG
MLLYETN
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgaggactttactctacctgctcgcctttgccttttttcggctctgttcgggtctgggg
tatgtggagtccagcatacagacaggtcagagggcggcgagcagacacaggaactggtgt
gcttatgtagtgacacgaaccgttagctgtgtgatggaggatggtgtggaaacctacatc
aagccggactaccatcgctgtacctggggccagtgtcctcgagtaatgtaccgcacatat
aggaggccaaggtacaaggtggcttacaagatggtgacagaaatggagtggaagtgttgc
catggttactctggggaagactgtcatattggaccacaagtgacacctgacagccaaggc
aatggtgggcagcctcaagtcacgcagaccagccacaacacaggaggtggaaagataggt
ggagaagataactcggagaagtttcgcaatctggaagaagccatccgaggtctaaccaaa
gacctccacagtatgcagaccaccattaatggcattaatcaaagactgtctgacttgact
ggagtcgttatccctgctgactcagctcagggtcacatgaaggaaaccattcacaatatc
catacaaagctggaccacctctataacagaacacaggttcacgatcagactcttcttcac
atcaacaaccacttggtcaacggacagagcaatgaactggattcaacatctggaaaagac
ggagcaatattaaaccaccacctaactacactaaaagaggaaatactgacagagctggag
agaagggtgtctctgtcctgttctgcctgccaggtgggtgtggaggatgtgagacaacag
cagaggaaggacagggaacgaatcgaagcactggagaagctgatcaactccattgaccag
cagttaagacaagtttccagcagggagagctcttaccagatgtgctgcagcacagtcaca
gaagtggaaaagaagctgacggatgtggaagtcagagtcacgtctatcgcagacaagtgc
gacacagtcaaaggactgctggataaagagctcgccgacacgggtggtgggaaggggatg
gtgacagaagagcgtttcaacagccggttgagagatcttgaaaaaagggttaataacacg
atgaggaaggcagaacagaggtgtacaaacactggaaccagtgtgaaggacatcatccag
agagatctcatccagttgcacaacacgataaacagacgactagatgattatggtcacaag
attgaaaaaacagaactggaagtgtctgttcttgaagacacagtcagagaccacagccgc
cggataggtcagctagagaatattacaacgttccttgacagaaggctaacgtcaaccaca
agcatatgtaatgagacatgtgggcacaatggaaaagtttcagctgctgataataccatg
aaaacattgcaatggaaggttgtgtccaaccaagaggaaatccgaaagtttaacaccaag
ctggacaatttatttgagacaggagactcacttacggaaagagtgttcgacttagagaac
gatatcaaaagagtaacggccataacgggagacaacggtgaacgctttaaccgcatcgtc
accgaggttgaaacattgagccgagatctccaggagtgctccatttgcaccagtgtaagg
caggacctgctcttcttcaaaaacaccaccaccagggccttgaacaactgcctgcttgac
atcacagacttgcagagaaaggttaactccagagaagacacctgctctcaggtttgctcc
aaccttcaggaggaggtcgggcgactaaaagaggaagtagagaaatgtacgggacagtgc
aagactaacatggatgatctgaaaaaccgtctggatggtcacaccttccacaatggaaga
ttgggaggagaactcaaatccattcaaggagatctagctaatgttttttctacattcaac
tccatcaatagtacactgaagggcttaggaaggacagtgaagactcatgggaagacactg
acggatctgaccaattcaaaagaccgcattagctctgaggtgacaaacctgcaagagaag
ctgacagagcacatcgatgagtcaaagattcattttgtgggcctcggcaaggagatccaa
ttgataaggagcaactacatcacagaggtggaggggtgtcggcagtccagcgagggtgtg
gaccgaagactctccgagttggagggagtctgtggacgcttggactccttctccgacagt
ctggataggatcaaggacggcctgaacagacacgtgactggcctatggagctgcgttgat
ggactcaatgtcacagtgacgtctcacggagttatgattgacaatatacagaacgtccaa
ctggagaatgtccactccaagatacacagtctgaactcctctgtgttggatttgggaaga
cagttccgcgttttcacagcacaggattttacgggtacacgtggtccacctgggctacgt
ggagagaaaggtgaccgtggccctcaagggcgtattggacccccaggagtagtaggactt
ccaggttcaagaggcccacaaggacccccaggcctcagaggagaacagggacctgcaggg
tctgacgcccatgtgccacgcctttctttctctgccgcactgactcgccccatgagagct
tcagggaccatcaagttcaacgatgtctttgtaaacgagaaacagtcctacaatccccaa
acaggtttgttcacggctcctgtgcccgggaggtactttttcagcggcatcctgacgggc
cataaaaacatgaaaattgaggccgtcctgtccaaatccaacgtcggagttgctcgagtg
gactctgcaggatatcagcccgaaggcctggagaagcccatggcggagaccaaacacatc
cccggagctctggccgtctttaatatcattctgccgatggaggctggagacacggtgtgc
attgaccttgtaactggcaacttggcgtactcatctgaacctttgaccatctttagcggg
atgctgctgtatgagaccaattga
DBGET
integrated database retrieval system