Oryzias latipes (Japanese medaka): 101160061
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Entry
101160061 CDS
T02443
Symbol
ccdc36
Name
(RefSeq) interactor of HORMAD1 protein 1 isoform X1
KO
K26085
interactor of HORMAD1 protein 1
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ola03036
]
101160061 (ccdc36)
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
101160061 (ccdc36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IHO1
YkoP
CC_BshC
cas_Cpf1_2nd
Muted
AcetDehyd-dimer
Baculo_PEP_C
zf-C4H2
Fib_alpha
DUF1664
DUF489
FliJ
Motif
Other DBs
NCBI-GeneID:
101160061
NCBI-ProteinID:
XP_011473000
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All DBs
Position
5:4642418..4646995
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AA seq
433 aa
AA seq
DB search
MNAAREGGNSKRPLPAFLHFHGDSLVKNAMSAIRKIKQTLGIPKETSGGKSMDRNGSNTG
LTDSQLLFGSQFWFENSQNTSQDLSLSSRNSQQSLQEGSDPKFYRSYLLKPLLFGDYKDK
TNTIRSLDQFEEDKRKTKENNDIDFLARESQHVRETLCSIHQLVASTKQTVCQAVFDKID
NFASTLQSSLKNLVGDISQKFETLVAKANSQRDVISQLEEKMMEKGDITAELHGHLQSLK
NSLDGIREEQERKIHMLEEAVQLLQTLASELLAKPTAEATMHSATQTSPNLEQPLSNQKQ
PERAGLQVPAPPQDHKQVFRRTKPGARGLRRRKKRALVLPQRSKRTSSDENRQPLNGCNK
PQRLSEPVHRHQRDSPSPGSRRGGVAGCFITPLSSWSVDSSGSECFTAIEPILEKLSAEP
KTSGGFWQLFDSE
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcagcacgagagggcgggaattcgaagcgacctctgccggcttttcttcacttt
catggggattcgttagtaaaaaacgccatgagtgccatacgaaaaataaagcaaacgttg
ggaattccaaaggaaaccagtggaggaaaatcgatggacagaaatggctctaatactggt
ttgacagattctcagcttctctttggctctcagttttggtttgagaattcccagaacaca
tcccaggatctgagtctgtcatccagaaactcccagcaaagtttacaagagggaagtgac
ccaaagttttaccgcagttacctccttaaacctttgctgtttggagactataaggacaaa
accaacacaatcagatcactggatcagtttgaagaagacaagaggaagacaaaagaaaat
aatgacattgatttcttagccagagagtcacaacatgtcagagaaactctctgcagtatt
caccaattggttgccagcaccaaacaaaccgtctgtcaggcggtctttgacaaaatcgac
aattttgcatcaacattgcaaagcagtctgaagaatcttgtcggtgacatttcccaaaag
tttgagactctggtggccaaagcaaactctcaaagggacgtcatatcccagctggaggaa
aagatgatggagaaaggagacatcacagcagagcttcatggccatctgcaaagcttaaag
aatagtttggacggtataagagaggaacaggagagaaaaatccacatgcttgaagaggct
gtccagctgctccagactttagcctctgagcttttggccaaacccaccgctgaggcgacg
atgcacagcgctacccagacctcgccaaacctcgaacagccgctgtcgaaccaaaaacaa
cctgagagagctggtcttcaggtcccggcgccccctcaagaccacaagcaggtcttcaga
agaacgaaacccggcgccagaggtctgaggaggcgcaaaaagagggcactggttcttccc
cagaggagcaaacgcaccagctcggatgaaaaccgccagcccctaaatggctgcaacaaa
ccgcagagactttcagaacccgtccacaggcatcagagagacagccccagcccaggcagc
agacgtggaggagtggcgggctgtttcatcacgccgctgagcagctggtctgtggacagc
agcggctccgagtgcttcacagccatcgaacccatcctagagaagctgtccgctgagccc
aagacctcaggaggcttctggcagctgtttgattctgaatga
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