Oryzias latipes (Japanese medaka): 101160099
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Entry
101160099 CDS
T02443
Symbol
rpap2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ola01009
]
101160099 (rpap2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ola03021
]
101160099 (rpap2)
Enzymes [BR:
ola01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
101160099 (rpap2)
Protein phosphatases and associated proteins [BR:
ola01009
]
HAD phosphatases
Fcp/Scp phosphatases
101160099 (rpap2)
Transcription machinery [BR:
ola03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
101160099 (rpap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
101160099
NCBI-ProteinID:
XP_011484427
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All DBs
Position
17:5935967..5945051
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AA seq
584 aa
AA seq
DB search
MATEGKMKNPGKTSRKAGRRSKTLTAEEEARRRKDALREQLELERRALEVVEQLLESSVA
EDFLLESAKFITPANYRDAVEERSILKLCGYPTCPKQLGKIPSQQFKISTKTNRVYDITE
RKRFCSNFCYKASKEFELQIPKTPLWLRKLESPPKIRLLTAGQSGSSGEEVLLSDQRLKE
EDVEKPQAAAPAEPCGDHQSSAGDESSGGEQDFVSSVAFQQQKPRVHWADRTGESKNGSQ
GEEGTDGTECLSRLPQEDTRGPHPEPPQLLGPITSKAEPQDSPERPQLEEVTAQMRECTL
HETAAAPLPGLHITQVGMSRRGAAGLRALLGRQSCTGAKREPASLLETLRRTLKAWCTDH
TIRFLHGAACSPAPRHHNRKEEGELDEDDDADDVILTDDSGEKKLWGTEGDYETLQRLTQ
QMELRVKEFYKGTWVIPVEEPSANQQNLKEPVLPLVDSQAQHLIQKRITVEKLSSCLRTI
VGPLHLTLSDVSTDLNDLVKTFRFTNTNIVHKSPEWTLIAVVLLHVLSTVSPVVRGALEA
DSSVDYVKTLLKELGLEEQHLLSLVELFQPPHHTDSRQQADVYQ
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggaggggaagatgaagaatcccgggaaaacgtccagaaaagcagggagacgc
agcaaaactctgaccgccgaagaagaagccagaagaaggaaggatgcgctgagggagcag
ctggagctggagaggagagccctggaggtggtggagcagctcctggagagcagcgtggca
gaagacttcctcctggagtcggccaagttcatcactccagctaattacagagatgctgtg
gaggagcggtccatcttaaagctgtgtggttatccaacatgtccaaagcagctgggcaaa
atcccgtctcagcagttcaaaatctctaccaagacgaacagagtttatgacatcacagag
cgcaagcgtttctgcagtaatttctgctacaaggcctccaaagagtttgagctgcagatc
ccaaagacgcctctgtggctcaggaagttggagagtcccccgaagatcaggctgctgacg
gcaggacagagtgggagctccggagaggaggtgctgctgtcagatcagcgcctcaaagag
gaagacgttgagaaaccacaagctgccgcccccgctgagccatgcggggatcatcaaagc
tcggctggagatgagagcagcggtggggagcaggactttgtctccagtgtggccttccag
cagcagaaaccccgggttcactgggctgaccgcacgggtgaaagcaagaacgggagccaa
ggagaggaggggacggacgggactgaatgtctgagtcgccttccacaggaggacacgagg
gggccgcatcctgaacccccacagctgctcggtcccatcacaagcaaggctgagccacag
gactcacctgagcgcccccaactggaagaggtaacagctcagatgagggagtgcactctt
catgagacagcagcagcccccctgccgggcctccacatcacccaggtgggcatgagcagg
cgaggagctgcagggctgcgggctctgctggggaggcagagctgcacgggagccaaacgg
gagccagcgagcctcctggagaccctgaggaggactctgaaagcctggtgcaccgatcac
accatcaggttcctgcacggagccgcctgctcacctgccccccgtcatcataacagaaag
gaagagggggagttggatgaagatgatgatgcagatgacgtgatattgacggacgatagc
ggggagaagaagctgtgggggacagaaggagactatgagacgctgcagaggctgacccaa
cagatggagctgagagtcaaggagttctacaaggggacctgggttattcctgtggaggag
ccgagtgctaaccagcagaacctgaaggaaccggtcctgccgctcgtggactcccaggct
cagcatctgatccagaaacgcatcaccgtggagaagctcagcagctgcctcaggaccatc
gtaggcccgctgcacctcaccctgagtgatgtctccacagacctgaacgacttggtgaag
acattcaggttcaccaacaccaacatcgttcacaaaagcccggagtggaccctgatagca
gtggtgctgctgcatgtcctgtccacagtgtctcctgtggtgaggggagccttggaggcc
gactcctctgtggactacgtgaagacgctgctgaaggagctgggcctggaggagcagcac
ctcctgagtttggtggagctgttccaacccccccatcacacggacagccgccagcaagca
gacgtgtatcagtga
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