Oryzias latipes (Japanese medaka): 101160148
Help
Entry
101160148 CDS
T02443
Symbol
vps35l
Name
(RefSeq) UPF0505 protein C16orf62 homolog
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101160148 (vps35l)
Membrane trafficking [BR:
ola04131
]
Protein recycling
Others
Retriever complex
101160148 (vps35l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5667
Motif
Other DBs
NCBI-GeneID:
101160148
NCBI-ProteinID:
XP_004086849
UniProt:
H2N1D5
LinkDB
All DBs
Position
19:complement(1625936..1633728)
Genome browser
AA seq
969 aa
AA seq
DB search
MAAVQWRSRGRNYEAERQGCRPEGAPIEFGDYHPLKPIMVTDSKTRRGTRKGSTSSSSSS
SSSSAPPDPLSSMLDGTDPLSMFAATSAGQPPAVPHSSSTGDLGRRRREKEEEAVGPDFE
PWAMKRGEILARFTTTEKLSINLCMGSEKGKALGPGSSAVSEKVRTRLEELDDLEEGSQK
ELLNLSQQDYANRIEELNQSLKEAWASDQKVKALKIVIQCSKLLSDTAVIQFYPSKFVLI
TDILDTFGRLVYDRIWSMCSDPRPLPESFTVEDVNDTAKETCLNWFFKIASIRELLPRLY
VEAAILKCNRFLSRTGIQETLPRLTAMIRGIGDPLVAAYARAYLCRVGVEVAPHLKDSLN
RNFFDLLSAFRQIGGESVQNQLVVQRVEVPEYLTLYSPAINWILQCIAYRAPEVLLTEMM
DRCKTMANNALLLNSIMRAFRPEFVAARATDFIGMIKDCDESGFPKHLLFGSLGRSLACA
DPPESERLTILNEAWKVITKVRSPQDYIGCAEVWVEFTCRHFTKREVNTVLADIIKHLTP
DRAFEDAYAQLQSVIGRILTYFHDFSVLFSMERFLPFLDMFQKDSVRVEVCKSIMEVFIK
HQLELTRDPVILNAMLHICKTMHDSVNALTLEDEKRSLALLIVGFLRTVSFGRDFEQQLS
FCVEARAAFCNLEPVLVQLVHTVNTLAMETRRVMQGSHSRKTAAFVRACAAYSFITIPSL
GSIFTRLHLYLLSGQVALANQCLSQSDAFLKAAVSLLPEVPHSISVEGKLRSSEGFLLDF
INNFLATLLVVPDHPEHGVLYLVRGLLNMVQDYTWEENSDAKVRVYIGALPLLAAMSQEA
FLYSIPKVDSNETLYGGDPKFLSEINKLSETLIGQILDHLKALARDEQSARRQSALAFSL
FAVLLAHGDLRNNKLSQLAVNLWNLSHKQGLCDTRLSVRTLEHVKHQAQRPDMAHLAEAV
QRLTLQTRT
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgtgcagtggcgttcccgaggacgcaactatgaggcggagcggcaggggtgc
cgtccagagggggctcccatcgagtttggggactaccaccccctgaagcccatcatggtg
accgactcaaagacccggcgtggaacccgcaaaggcagcacctcgtcctcctcttcctcc
tcgtcctcctctgcacctccagaccctctcagctccatgctggacgggaccgaccccctt
tcgatgttcgccgccacgtcggccggccagccccccgccgttccccacagcagctctacg
ggggacctcgggaggaggaggagggagaaggaggaagaggcggtggggccggatttcgag
ccgtgggccatgaagcgaggcgagatcctggcccggttcaccaccactgagaagctctcc
atcaacctttgcatgggctcagaaaaagggaaagccctcggcccgggctcctcggccgtg
tcggagaaagtccgcacccgcctggaggagctggacgacctggaggagggctctcagaag
gagctgctgaacctctcccagcaggattacgccaaccgcatcgaggagctgaaccagtcc
ctgaaggaggcctgggcctccgaccagaaggtcaaagccctgaagatcgtcatccagtgc
tccaagctgctgtccgacaccgccgtgatccagttctaccccagcaagttcgtcctcatc
acggacatcctggacacgttcggtcgtctggtttacgacagaatctggtccatgtgttcc
gacccgagacccctcccagaatccttcacggtggaagacgtgaacgacacggcgaaggag
acctgtctgaactggttcttcaagatcgcctccatccgagagctgctgccccgactatac
gtagaggccgccatcctgaagtgcaaccgcttcctcagccggacaggcattcaggagacc
ctgccccgtctgacggccatgatcagaggcatcggagacccgctggtggcggcgtacgcc
agagcctacctctgcagggtgggcgtggaggtggcgccgcacctgaaggacagcctgaac
aggaacttcttcgacctgctctccgccttcaggcagatcggcggcgagagcgtccagaac
cagctggtggtccagagggtggaggtgcccgagtacctgaccctgtactcgcccgccatc
aactggatcctgcagtgcatcgcctacagggctccagaggttctgctgacggagatgatg
gacaggtgcaagacgatggcgaacaatgctttgctcctgaactccatcatgagggcgttc
aggccggagttcgtcgcagccagagccacagacttcatcggcatgatcaaagactgcgac
gaatccggatttccaaagcacctgctgttcgggtctctgggtcgcagtctggcctgtgct
gatccgcccgagtcggagaggctgaccatactgaacgaagcctggaaggtcatcaccaaa
gtccgcagtcctcaggattacatcggctgtgcggaggtctgggtggagttcacctgcagg
cacttcaccaagcgcgaggtgaacacggtcctggctgacatcatcaaacacctgacgccc
gaccgagccttcgaggacgcctacgctcagctgcagtcggtgatcggcaggatcctcacc
tacttccacgacttctccgtcctcttctccatggagcgcttcctgccgttcctcgacatg
ttccagaaggacagtgtgagggtggaggtctgcaagtccatcatggaggtcttcatcaag
catcagctggagctcaccagagaccccgtcatcctcaacgccatgctgcacatctgcaag
accatgcacgactccgtcaacgctctgactctggaggacgagaaacgatctctggctctg
ctgatcgtcggcttcctgcggacggtgtccttcgggcgggactttgagcagcagctgagc
ttctgcgtggaggccagagccgccttctgcaacctggagccggttctggttcagctggtc
cacacggtgaacacgctggccatggagaccaggagggtgatgcaggggagtcactcccgc
aaaaccgccgccttcgtcagagcgtgcgccgcctacagcttcatcaccatcccgtcgctc
ggcagcatcttcacgcgccttcacctctacctgctgtccggtcaggtcgccctggccaac
cagtgtctgtctcaatccgacgcgttcctgaaggcggcggtcagtctccttccagaggtt
cctcactccatcagcgttgaggggaagcttcgctcctctgaaggctttctgctcgacttc
atcaacaacttcttggccacgctgctggttgtcccggaccacccggagcacggcgtgctc
tacctggtgcgaggtctcctcaacatggtgcaggactacacctgggaggagaacagcgac
gccaaggtgcgggtttacatcggcgccctccccctgctggccgccatgagtcaggaagcg
ttcctgtactccatccccaaagtggattcaaatgagacgctgtacggaggagacccaaag
tttctttcagagatcaacaagctgtccgagactctgatcggacagattttggaccatctg
aaggcgctggcgcgtgatgagcaaagcgctcgccggcagagcgccctggccttctccctg
ttcgccgtcctgctcgctcacggggatctgcggaacaacaagctgagtcagctcgccgtc
aacctgtggaacctcagccacaagcagggcctgtgcgacacccgcctgtctgttcggacc
ctggagcacgtcaagcatcaggcgcagcggcccgacatggctcacctggccgaggcagtc
cagaggctcaccctgcagacccggacctga
DBGET
integrated database retrieval system