Oryzias latipes (Japanese medaka): 101160234
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Entry
101160234 CDS
T02443
Name
(RefSeq) cat eye syndrome critical region protein 2
KO
K25830
cat eye syndrome critical region protein 2
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101160234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ola03036
]
101160234
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Chromatin remodeling factors
CERF complex
101160234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
KIAA2026_hel
DDT
Motif
Other DBs
NCBI-GeneID:
101160234
NCBI-ProteinID:
XP_011474793
UniProt:
A0A3B3IJ93
LinkDB
All DBs
Position
6:complement(29227747..29268357)
Genome browser
AA seq
1556 aa
AA seq
DB search
MTPGCGVSVEEIQSWWEVPAIAHFCSLFRTAFHLPDFEIEELEKAVSEQDLDFLGDLVTC
LLQGCYQRTDITPQTFGGYLDDIISYRWELEEGKPNPLREGPFESLLPRTQVELLHRLCD
YRLDAADVFDLLKGLDADSLRVEPLGQDGDGALYWYFYGTRMYKEEPVQRESDLSMPERK
KRGRPPKKRKFEDAHLSETESEDADDKSENGLDDFPPSPARERGAWSLVCDTEEQWIKLA
DSIKDKTSPQDRHLYRVISQNFLPEIRSMIEHKEQELKQKLLDPPPVRISQRFSEIHFKR
EEEGPGVISDERKKDEELDRQVMLAEQRREEERILQEERQREKLEKIKAVEDRAKRRKMR
EEKAWLLSQGKELPPELLNLEPSSPIARTCRNKEFYDIDDDYTALYKVLEALKAHKDAWP
FLEPVDDSYAPNYHEIIQTPMDLSTIERKLNDGKYVAKEEFVADVKLMFENCVEYNGDDS
EYTIMAESLERCFSRALLKHFPSEDCDTDEEFHVSREEKERKDKKRNRSNKHSGPESLIR
ATEQVQRKRNFPGGKGNGPAEEENHRRANGPGYPLSQLPQQHPRGMYHPGQQFHHHPAGP
HGPHMYGQRMTMDPRFTYPVHIPRHGDPNLSHMSQSFNMQHHMGPRYSMGPNPNQQQHSY
MGPASLGPRPIALQPGPPPEASMYPSHHYPEGHPMHPMGNRLSGPEGPSQHSFSGLRPSG
MGMPNMWPARNHQGPDRLNGIGMQDPNLGNQRNFAYGGIPPPAGPKPWPEAAGYPHPSSS
AQYQMSGAAGSLGPMSSHPPVPHPDPSGRTRLSSMLESPEMLAMQQLSASSGPPAGAPPQ
HRGNFQQPGPPSGVGSIPAKQPPPTPEVQLLHPARNKGPDSHPAQPTDVDPKDPSLEGNM
TANIIFENGSLQKNSYSINQERPLMLSATHCGVRSPPNANPSRSKEESSRLGLAQISPER
CRQKVDGHFPTQSRGAASSGPSSTSSNELPDGLQGSPHPEAPSPADLPQNPPPVHVTLAQ
IPDHKEDARLQSELQGTIQKARAAQSVLPQSHFESSAQQITQNTEQPKSLVPSHHMPQRI
SPQCPTESSPMHGMPQTNTQTTPSAPPQPVPLTSLPPSHPTPQLPSQPSPADHGNQRPSE
PTSRPHTGAAGVSPHHAAVTAGPPAGVYKHHAFSPNHNQMVGGSMGMQTPHDPNPAMPPP
SHCPASDAVGQFGVGSPSHPHYNQANMGRSVPPSTHPYHSQINALYSPPPHPNYHQHAGA
AYYNVPSQQHPNPHGSLYPPHQYQQENYLPHPQAQPHSHLNGRRGYPPKDWHPSFYQPQQ
PIPPSAYLPGASARGGGQLKESSMSPLGSEGSGGAAMLSPGHVTDAGPHSGGTDEGKCES
GGLSGAGSGSNPPRRAQNESSEQPESPKEILDLDSHNALARHRSIQPLQQQHPPAPGVRL
SPGFMYDPRSLHPGMQQGGVPPSCDGRNSYPGQPYPDPGRFAAQRPLPHLMEALQRPQHL
PYSPGQTRMAMYRHVRPGGHFQGLMVQQRGQGPERFLHPGQQMMTAPGSPRSKQVL
NT seq
4671 nt
NT seq
+upstream
nt +downstream
nt
atgacaccgggatgtggagtttcggtggaggagatccagtcttggtgggaagtccccgcc
attgcccacttctgctcgctgttcaggacggcgttccaccttccagacttcgagatcgag
gagctggagaaagctgtgtccgaacaggacttggactttcttggggacctcgtcacctgt
ctgttgcagggatgctaccagcgcactgacatcaccccccagacctttggcggttacctg
gacgacatcatcagctaccgctgggagctggaggaggggaagcccaacccactccgggag
gggcccttcgagagcctcctgcctcgcactcaggtggagctgctgcatcgtctctgcgac
taccggctggatgctgccgatgtttttgacctgcttaagggtctagatgcagacagcctg
agggtggaacccctggggcaggacggggatggagccctctactggtatttttatggcacc
cgtatgtacaaggaggaacctgtgcaaagggaatctgatctctcaatgcctgagagaaag
aaaagggggagaccccccaaaaagagaaagtttgaagacgctcatttaagtgagacagag
agtgaagatgcagacgacaagtcagaaaatgggctggatgactttccaccgagtccagct
cgtgaaagaggcgcttggtccctggtgtgcgatacggaggagcagtggatcaagctggcc
gacagcatcaaggacaaaacatccccgcaggaccgacacctctaccgcgtcatcagccaa
aacttcctgcccgagatccgcagcatgatcgagcacaaggaacaggagctgaagcagaaa
ctgctggatccgcctccagtccgcatatcgcagcgtttctctgaaattcacttcaaacgg
gaggaggagggtcctggggtcatctctgacgagaggaagaaagacgaagagctggacagg
caggtcatgctggccgagcagcggcgagaggaggagaggattctccaggaggaacgtcag
agggaaaagctggagaagatcaaagccgtggaggatcgagcaaagaggcggaagatgcga
gaggaaaaggcctggttgctctctcagggcaaagagctgccgcctgaactcctgaacctg
gagccatcttcaccgatcgccaggacatgcaggaataaagaattctacgacattgacgac
gactacactgctctttacaaagtgctcgaggccctaaaagctcataaggatgcttggcct
ttcttggagcctgttgacgactcctatgcccccaattaccatgagatcatccagactccc
atggacctgtccaccattgagaggaagctcaacgatgggaaatatgttgccaaagaggag
tttgtggccgatgtgaagctcatgtttgaaaactgcgttgaatacaacggagatgacagc
gagtacaccatcatggcggagtccctggagcggtgttttagccgcgccctattgaaacac
tttccctcggaagactgcgacacggatgaagaattccacgtcagccgagaggaaaaagag
cgcaaggacaagaaacgaaaccgcagcaataaacactctggacccgagagtttgatcaga
gcgacggagcaagtccaacggaagagaaatttccccgggggcaaaggcaacggccctgcc
gaggaagaaaaccacaggagagctaacggtcccggctaccctctcagccagcttccccag
cagcacccaagaggcatgtaccaccccgggcaacagtttcaccaccatccagctggtcct
cacggacctcacatgtatggccaaagaatgacgatggatcctcgtttcacatacccggtt
catattcccagacatggagaccccaacttgagccacatgtctcaaagctttaacatgcag
catcatatgggtcctaggtattctatgggcccaaaccctaatcagcagcaacactcttac
atggggccggcgtcattgggtccgcgacctattgcccttcaacctggaccccctcctgaa
gccagcatgtatccgtcccaccactatccagagggccaccccatgcatcctatgggcaac
aggttatcgggtcctgaaggaccgtctcagcacagcttctccggtttgaggccttccgga
atgggcatgccaaacatgtggcctgctcgcaatcaccagggcccagacagactgaacggc
attgggatgcaggatcccaacctggggaaccaacgcaatttcgcctacggtggaatcccc
cctccagctgggcccaaaccgtggcctgaagccgctggataccctcatccctcttccagc
gctcagtatcaaatgtctggagcagccggctctttgggacccatgtcctcacaccccccc
gtcccccatccagacccttctggccggactcgcctgtcgtctatgctggaaagcccagag
atgctggctatgcagcagctgtcagcctcctctggaccccctgctggtgcccctcctcag
cacagaggcaactttcagcagccagggcccccatcaggagttggcagcatcccagcaaaa
cagcccccccctacccctgaggttcagctgctgcacccagccagaaacaaagggccagac
agccaccctgctcaaccgacagacgtggaccccaaagatccgtcgctggagggaaacatg
acggccaacatcatctttgaaaatggttcattgcagaaaaactcctattccatcaatcaa
gagcgcccgctcatgctcagcgccacacactgtggagttcgcagtccgccgaacgcaaac
ccgagcaggtcaaaggaggagtcctccaggctgggactcgcacaaatctcacctgagagg
tgcaggcagaaagtggacggccactttcccacgcaaagcaggggggctgcttcttctggt
ccaagcagcacaagctccaatgagctccctgatggtctgcaggggagcccacacccagag
gctcccagtcccgcagatcttccacaaaacccgccgccagtccacgttactctggcccaa
ataccagaccacaaggaggatgcacgcctgcagagtgagcttcaagggacgattcagaaa
gctcgtgcagctcagagtgttctgccccaaagccactttgaaagctccgcccagcaaatc
acgcagaatacggagcaacccaagtccctggtgccttctcatcacatgccccaaagaatc
tctccacagtgccccacggagagcagccccatgcatgggatgccccagacgaacacacaa
accaccccttctgccccaccccaacctgtgcctctcacttctttgcccccaagtcaccca
actccccaattaccctcccagccaagtccagcagaccacggaaatcaaaggcccagtgag
cccaccagcaggccacacacaggggccgctggcgtgtctccacaccacgccgcggtgaca
gccgggccgccagccggtgtttacaaacaccatgctttcagcccaaaccacaaccagatg
gtgggtgggagcatgggaatgcagactccccatgatcccaatccagccatgcccccaccc
tcccactgtccggccagcgacgccgtgggccagtttggtgtggggagcccctcacatccg
cactataaccaggcaaacatgggcaggtcggtgccgccatccacccacccatatcacagc
caaataaatgccctctacagccctccgccccacccaaactaccaccagcacgccggggcg
gcctactacaatgtgccttcccagcagcaccccaatcctcatggcagtctgtatccgcca
caccagtaccaacaggaaaactatctgccccacccccaagctcagccccacagccacctc
aatggcagaagaggctacccccccaaggactggcatccatctttttatcaaccccagcag
ccgatcccacccagcgcctacctgcccggtgccagcgccagagggggcggtcagctgaag
gagagcagcatgtctccgctcggttctgagggctccggtggagccgccatgctgtcaccc
ggtcacgtgacggacgcaggaccgcattctggaggcaccgatgaaggcaagtgcgaaagc
gggggtctctctggtgcgggcagtggcagcaatccaccaagacgagcccagaacgagagc
tcggagcaacccgagagtccaaaagagattttggacctggacagtcacaacgcgctggct
cgccatcgcagcatccagccgcttcagcagcagcatccgcccgctccaggcgtacgtctg
tctcctgggttcatgtacgacccccgatccctacacccagggatgcagcaaggaggggtc
cccccctcctgcgacggtagaaactcttatcccggccagccgtacccggaccccgggcgc
tttgctgcgcagagacccctcccacatctgatggaggctctgcagcggccgcagcatctg
ccctactccccgggccagacgcgcatggccatgtacagacacgtcaggcctggggggcac
ttccagggattgatggttcaacagagaggacaaggaccggagcgcttcctgcacccagga
caacagatgatgactgctccaggcagccccagaagtaaacaggtgttgtga
DBGET
integrated database retrieval system
