Oryzias latipes (Japanese medaka): 101160242
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Entry
101160242 CDS
T02443
Symbol
poli
Name
(RefSeq) DNA polymerase iota isoform X1
KO
K03510
DNA polymerase iota [EC:
2.7.7.7
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
101160242 (poli)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ola03400
]
101160242 (poli)
Enzymes [BR:
ola01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
101160242 (poli)
DNA repair and recombination proteins [BR:
ola03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
101160242 (poli)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH_1
UBM
IMS_HHH
DNA_pol_lambd_f
Cdd1
HHH_5
Motif
Other DBs
NCBI-GeneID:
101160242
NCBI-ProteinID:
XP_011477067
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Position
9:complement(1940248..1946730)
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AA seq
681 aa
AA seq
DB search
MDSSDEEMDGDDGQWRSQFTGPEEPATSGWSVNNPPGAPHRVILHFDLDCFYAQVEMIRD
PSLREVPLGIQQKYIIVTCNYVARERGVTKLMSVTDAKEKCPELVLVRGEDLTLYREASH
QVTELLSSFCPLVERLGFDENFMDVTEMVERRMKETPPPEGYSFSGHVYNPSNAEISGSD
HPRLALGSYIAAELRDAVHSRLGLTGCAGVATNKLLAKLVSGTFKPNQQTVLLPEDVGHI
MESLGGVRKVPGVGHQTAKKLHQLGVVSVKDLQLLPLPDLVKEFGGAVARRLRNLSLGVD
DSPVTPSGAPQSLSDEDSFKKMSSEAEVVEKIQQLLSRLVERMQKDGRQPQTFRLTIRRY
TPTNKWFSRESRQCPIPSHLGQKILSGATEDAVLPLVSLAMKLFHKMVDGGSAFHLTLIN
VCFSNLQSRAAGAGGKGAITAFFPRRSQNQDSAPSIDGRRSGHGVPPAPTGSSSGSEGEF
GGLERNQSFFETLLERTDIPRSTQGCGFNEATRTPSQRLPADVDPEVFGALPEEIQKELL
GSAHLNSSTCPSIADALRLPTNKPPKTFTDSEGNKFWKDPSPADPATAVGPERLAGTRTL
TERAAFPPSSDRELPGNVDPLVFSQLPLGIQRELRSEWRQQKPVLKVPSSKGSGRRSQGK
DPKAVGGSSQHNNLLKYFKRS
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggacagcagcgatgaagagatggacggagacgatggccagtggaggagccagttcacg
ggtccagaagaacccgccacttccggatggagcgtaaataatcctccaggagctcctcac
agagtaattctccactttgacctggactgtttctacgctcaggtggagatgatcagagat
ccttctctgagggaggttcctttaggcatccagcagaagtacatcatcgtcacctgtaat
tacgtggcgagggagcgcggcgtcaccaagctgatgtctgtaaccgatgccaaagaaaaa
tgtccagagctggttctggtccgaggagaagacctgacgctctacagagaggcttcccat
caagtgacagagctgctgtcgtctttctgtcctttggtggagagacttggctttgacgaa
aacttcatggacgtcacagagatggtggaaaggcggatgaaggagacgccgccgcctgaa
ggatattcgttttctggacacgtctacaacccttccaacgcagagatcagcggcagcgac
cacccgcggctggctttgggctcctacatcgcggccgagctgagggacgcggtccacagc
agactgggcctgacgggctgcgccggcgtcgccaccaacaagctgctggccaagctggtt
tcaggcaccttcaagcccaaccagcagacggtcctgctgccggaggacgtcggccacatc
atggagtcactgggcggagttcggaaagttccaggtgtggggcatcaaacggctaaaaaa
ctccaccagctgggcgtggttagcgtgaaggacctgcagctcctcccactgcctgacttg
gtgaaggagttcggaggcgctgttgctcggcgcctgaggaatctctccctgggtgttgat
gactcacctgtcacccccagcggggctccccagtctctcagcgatgaagattccttcaag
aagatgagctccgaggccgaagtggtggagaagatccagcagctcctcagccgtctggtg
gaaaggatgcagaaggacggcaggcagcctcaaaccttccggctcaccatccgcagatac
acgccaaccaacaagtggttcagccgggagagccggcagtgccccatcccgagtcacctg
gggcagaagatcctctctggcgccaccgaggacgccgtcctcccgctcgtctctttggcc
atgaagctcttccataagatggtggacggcggctccgccttccacctgacgctcatcaac
gtctgcttcagcaacctgcagagcagagccgccggcgccggtgggaagggcgccatcacc
gcctttttcccacggcgctcccagaatcaggactcggctccgagtatcgatggtcgccgc
tcgggtcatggcgttcctccagcccccacaggaagctcttcaggctctgagggggagttc
ggtggcttggagaggaaccagagcttctttgagactcttctagagaggacagacattccc
cgcagcacacaaggatgcggttttaatgaagccaccagaactccgtcacagagactgcca
gcagatgttgacccagaggtgttcggcgcccttccagaggagatccagaaggagctttta
ggttctgctcacctaaactcctccacctgcccctccatcgctgatgctctccgtttacct
acaaacaaacctccaaagaccttcacggactcggagggaaacaaattctggaaggatccc
agtccagccgacccagcgacggctgtgggtccagagcggctcgcgggaacgagaaccctc
acagagcgagcggcgtttcctccgtcatccgaccgcgagctgccgggaaacgtggatcct
ctggtgttttcccaactcccgcttggaattcaaagggagctgaggtccgagtggaggcag
cagaagccggttctgaaggtcccgtcctccaaaggttctggcaggcgctcgcagggcaaa
gacccaaaagctgtgggggggagcagtcagcacaacaacctgctgaagtatttcaagcgg
agttag
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