Oryzias latipes (Japanese medaka): 101160249
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Entry
101160249 CDS
T02443
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101160249
Membrane trafficking [BR:
ola04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
101160249
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
LRRNT
Ig_2
V-set
Motif
Other DBs
NCBI-GeneID:
101160249
NCBI-ProteinID:
XP_011479075
UniProt:
H2LDC8
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All DBs
Position
11:7267559..7273591
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AA seq
610 aa
AA seq
DB search
MFSVTPAQFWIRWRVLSLLIAAVTSSSETSRACPPSCRCNSSALVIDCWGSQLTSVPDGL
PQEAKLLNLSKNAIKTLVHQQFHMLTPLLHLDLSNNLLVLIEADAFLGLQNLLTLNISHN
HLKIIPVGAFVGLSSLKLLDISSNQLLVFLDFTFRDLTSLQFCKASDNSFVFISHQAFYG
LSSLRELDLDGFNLTVVPTEALNQLGRLRSLSFRRLGTTTLPNHSFSSLVQLKDLVVSQC
PRLERLSANSLFGLNLTSLSITHCNLGGVPYVPLHHLVYLVHLDLSFNPITYIHGNLLKD
LLRLEEFHLVGGSLIQVEVGAFEGLLHLNLLNVSRNHLTTLEAGAFQSADGLKALGLDGN
PLACDCRLLWVVRRRLLLDFGGNPPTCTTSVQLQGWNFLDFSDDELLKLLTCHRPRILNS
KRQDVMVDQGHTAVLHCGAEGDPLPSIHWLNPQLRQVPPVGRIRALTNGTLEVRFAQPHD
SGAYICVTSNAGGNDSLRVSLHVQALPSPSKNRFALHGWSVLPSPSPGGIGNPKLPFDVK
TLLIAATIGFLSFFSSVSVCFVFMFFWSKGKGQIKHTATIAYVPRSAVSSSSNKAAGSYM
ETGRFTMKLI
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcgtgactcccgcccagttctggatacgctggagagttctgtctttgttgatt
gcggcagtgacttcatcttctgagaccagcagggcgtgtccaccgtcctgccgctgcaac
tcttctgcgctggtgatagactgctggggcagccagctcacctccgtgcctgacggcctc
ccgcaggaagccaagctcctcaacttgagcaagaacgcaatcaagactctggtgcaccag
cagttccacatgctaactcctttgctgcacttggatttaagcaacaacctgctggtactg
attgaagctgacgcctttctgggcctgcagaacctcctgactctcaacatctcacacaat
cacctgaagatcattccagttggagcttttgttggtttgagcagcttaaagctgcttgac
ataagtagtaatcagcttcttgtgttcctggactttacttttagggacttaacatccctc
cagttctgcaaagcgtcagacaatagcttcgtttttatctctcatcaagccttttacgga
ctctccagtttacgagagctggaccttgatggctttaatctcactgtggtgccaactgaa
gctctaaatcagctcggtcggttgagaagcctcagttttcggcgactgggaacgaccact
ctgccaaaccactctttcagttccctagtacaactgaaagacctcgtcgtttctcagtgc
cccagattggagcgcttgtctgcaaatagtctgttcggactcaatctcacgtccctgagc
atcacgcactgtaaccttggtggtgtcccctacgtccctttgcatcaccttgtgtatctt
gtgcatcttgacctttcttttaacccaatcacctacatccacgggaacctgctaaaagat
ttactccgcctcgaggagttccatctagtgggcggatcattgatccaggtcgaagttgga
gcttttgagggtttgctgcatttaaatctgctgaacgtgtcaagaaaccatctcaccacc
ctcgaggcgggggcgttccagtcggcggacggcttaaaagctcttggcctcgacggaaac
ccgctggcgtgcgactgccgactgctttgggtggtgcggaggcgactgcttctggatttt
ggggggaatccgccgacttgcaccacttcagtccagctgcagggctggaattttctggac
ttctctgacgacgaactcctgaaacttctcacctgtcacaggcctcgaatcctgaacagc
aaacgccaagatgtgatggtggaccagggtcacacagcagtgctccactgcggtgcagaa
ggcgacccccttccttccatccactggctgaaccctcagctaagacaagtcccaccagtc
gggagaatacgggctctcaccaacggcacgctggaggtccgctttgctcagccacacgac
agtggcgcttacatctgcgtcacttccaatgccggaggaaacgacagcctgcgcgtcagc
cttcacgtccaagccttgccatcaccttccaaaaaccgctttgctcttcatggttggtct
gtccttccatcgccctcccccggcgggatcggaaatcccaagctcccgtttgatgtcaag
acgctcctgatagcagcgacgattgggtttctgtcgtttttcagctctgtgagcgtgtgc
ttcgttttcatgttcttctggagtaaaggcaaagggcagattaaacacacagccaccatc
gcatatgtgccaagaagtgccgtgtccagcagcagcaataaagcagcgggcagctacatg
gagacgggcagattcaccatgaaactgatatga
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