Oryzias latipes (Japanese medaka): 101160264
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Entry
101160264 CDS
T02443
Symbol
depdc5
Name
(RefSeq) GATOR complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
101160264 (depdc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101160264 (depdc5)
Membrane trafficking [BR:
ola04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
101160264 (depdc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
101160264
NCBI-ProteinID:
XP_023820572
LinkDB
All DBs
Position
17:6167565..6198150
Genome browser
AA seq
1587 aa
AA seq
DB search
MKTNKSYKLVLHKKGFGGSDDELVVNPKIFPQVNLGDVIEIAHPSDEYSPLLLQVKSLKE
DLQKETISVDQTVAQAFKLRAYQDVIVNIVDPKDVTLDLVELTFKDQYIGRGDMWRLKKS
LVSTCAYVTQKVEFAGIRAQASELWVKGEKVTCGYISEETRVVFRSTSAMVYIFIQMSCE
MWDFDIYGDLYFEKAVNGFLSDLFAKWKEKNCSHEVTVVLFSRTFYSAKSLEEFPEILKG
SIRQDHEGHFYEDFYRVVAQNERRDEWTSLLVTIKKLFIQYPVLVRLKEADGFPLGYNST
AAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDN
GIGVDLVCMGEQPLHAVPLFKLHNRTSPGDSRVGDDYNLPHWINHSFYTSNSQRSCGSFT
PRIKLAGRKIHAEKFKSSKDHSLCAPKDPDNSLPIQVDYDAYDAQVFRLPGPSRIQRSTI
YRMGRDRDASGRKSVGSVDVSSGVGASSPVCSGGLEEQRSLASDDSLGPVSNMLLIPRAP
ALHYEVSSSLGYTSTREFLEKMVDSQRESSAPGRFTVGSAESTLHIRPGGYTPQRALINP
FTPSRMPMKLTSNRRRWMHTFPVGPSGEPIQIHHQTRQNMAELQGSQQKDSAHTSAELLE
LAYHEATGRRTTSRQAGDLYSCGGAEEFAGSPGSGGGSGPLATRSSSFQDCPTGGSDPIL
LLSAPPTVPSFCCTVGVDWKSLTTPACLPLTTDYFPDRQTLQNDYTEGCYDLLPHSDLER
REDDAPVMSASQVFEEFICQRLMQGYQIIVQPNNRKPPPTAATPLGSSPLYTRGLVSMRR
GEEEETVFWLSMGRTFHKVCLKDKIITVTRYLPKYPYESAQIQYSYSLCPPHADAQFVSC
WVEFGHERLEEYKWNYLDQYICSAGSEDFSLIDSLKFWRTRFLLLPAGGARRVADGEGHW
DVYGEGAGAGAGSSGEWVLLDGFIRFLEGLNRIRRRHRSDRIIRQKGTPMKSLQVSSPLS
SYPSEPVAPPQGKRGTSALSALLEMEQNQKSLEEQPKPSAAPADVSTVSFIDSPRKDAAF
ILDFIRSPRSSYIHPSQEQLNNSSVCLQLPAETTEAAEKAGQPGAGAVPPAGDAAAGGAD
ASGQSAAGTHCLSSSSTLLEILEAIKHPTTGVQLLPEQKGLPPHCFISSEVVHWLVNNVE
GVATHGMAVDVMQKMLDEGLVAHASGDAMRSFIYGFYFYRIVGEKDGLTTQLPAAAGGGW
STTVPEDFALFQRKWFEVAFVLEERRPSDLPAFLLPWLPSRPASYASRHSSFSRSFGGRS
QAAALLAATVPEQKTVTLDVDVNNRSDRTEWCSCYYHGNFSLNAAFEIKLHWMAVTAAVL
FEMVQGWHRKAASCGFLLVPVLEVPFALTTYLYGDPLRAHLFIPLCIQCLLKNSSDSLFE
GFEPETYWERMQLFQEAILYRFGFVQDKFSASGFNFPSESKPQYIHVTGTVFLQLPYSKR
KYSSGQQRRRRNSTTSNSQGPFGGEDRVGFYWAYNTMLTKAWRTGLLGDERLADRLLRDF
TDFCANKDNRLQNLWDSCQEKMNASAP
NT seq
4764 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgaataaatcctacaaactggtgctgcacaagaaaggtttcggcggaagcgat
gacgagttggttgtcaaccccaagatcttccctcaggttaatttaggggatgtcattgag
attgcacatccctcagatgaatacagccctctcctgctgcaagtgaagagcctgaaagaa
gacctccagaaagagacgatcagtgtggatcagacggtggctcaagccttcaaactgcgt
gcataccaggacgttattgtcaacattgttgatcctaaggatgtgacgctggatctggtg
gagctgacgtttaaggaccagtacattggcagaggcgacatgtggcgactgaagaaaagc
ctggtgagcacttgcgcttacgtgactcagaaggttgaatttgctggaatcagagcgcag
gccagtgaactgtgggtgaaaggggagaaggtgacctgtggttacatcagtgaggagacc
agggtggtgttcagatccacgtctgccatggtctacatcttcatccagatgagctgtgag
atgtgggactttgacatctatggtgacctctactttgagaaggctgtaaacggcttcctc
tctgacctttttgccaagtggaaggagaagaactgcagtcacgaagtgaccgttgtgttg
ttctcacggactttctacagtgccaaatctcttgaggagtttcctgagattctgaaaggc
tccattagacaggatcacgaaggacatttctatgaagacttctacagagttgtggcacag
aatgagagacgagacgagtggacatcgctgttggtcaccatcaaaaagctcttcatccag
tatccagttctggtgcggctaaaggaagcagatggttttcctctgggttataactcaact
gctgcacagggaaactacctggaggccattaacctttcttttaatgtgtttgacaagcac
tacatcaaccgtaactttgaccgcaccggacagatgtcagtggtcattacgcctggagtg
ggagtgtttgaagtcgaccgtctactcatgattctgaccaaacagcgaatgattgacaac
ggtatcggcgttgacctggtgtgtatgggagagcagccgttgcatgctgtaccattattt
aagctgcacaacaggaccagccctggagactctcgtgtgggagacgactacaaccttcct
cactggattaaccacagcttctacacgtcaaacagtcagaggtcttgtggctccttcacc
cctcgaatcaaactggctggtcgaaagattcatgcagaaaagttcaagagcagcaaagat
cacagcctgtgcgcccctaaggacccggacaacagtctgcccatccaggtggactatgat
gcctacgatgctcaggtcttcagactcccaggtccttcgcggatccagaggagcaccatc
tacaggatggggcgagacagagacgcgagtgggaggaagagcgtgggctctgtggacgtc
agctcaggcgtcggggcgtcttcccccgtgtgctcgggcggcctggaggagcagcggagc
ctggcctctgatgacagcctgggtcccgtgtccaacatgctgctcattccacgcgcacct
gcactgcactacgaagtcagcagctctcttggatacacgagcaccagagagttcttagag
aaaatggtggactctcagcgggagtccagtgccccaggccggttcaccgtgggaagtgct
gagtccacactgcacatccgtccaggaggttacacgcctcagagagctctcattaacccc
ttcacaccgtccaggatgcccatgaagctcacctccaatcgcaggcgatggatgcacacc
ttccctgtgggaccttctggagagccgatccagatccaccatcagacgagacagaacatg
gcggagctgcagggcagccagcagaaagactccgcccacacgtctgcggagctgctggag
ctggcctaccacgaggccaccggcaggagaacaacgtctcgccaagcgggagacctttac
agctgtgggggagcagaggagttcgctggaagtcctggcagtggcggtggcagcgggccg
ctcgccactcgtagctcctccttccaagattgtcccactggtggatccgatccaatcctg
ctgctgtctgcacccccgacagtgcccagcttctgctgcacggtgggggtggactggaag
tcgctgaccacgccggcgtgcctccccctcaccaccgactacttccccgaccgccagacc
ctgcagaacgactacacggagggatgctacgacctgctgccgcacagtgacctggagcgg
cgagaggatgacgctccagtgatgagcgcatcccaggtgtttgaggagtttatctgtcag
aggctgatgcaggggtatcagatcatcgtccagcccaacaacaggaagccgccccccacc
gccgccacgcctctgggcagcagtcctctgtacacccggggtttggtgtccatgcgccga
ggggaggaggaggagacggttttctggctcagcatgggccgcaccttccataaagtctgc
ctcaaagacaagatcatcacggtgactcgctacctgccaaagtacccgtacgagtctgct
cagatccagtacagctacagcctctgcccgccacacgccgacgctcagttcgtttcctgt
tgggttgagtttggccatgagagactggaagagtacaagtggaactacctggaccagtac
atctgctctgctggttcagaggacttcagcctgattgactctctgaagttctggaggact
cgctttttgctgctaccggcgggtggagctcgccgcgtggcggacggagaaggccactgg
gatgtttacggagagggagcgggtgccggagcgggaagcagcggggagtgggtcctgctg
gatggattcattcgcttcctggagggcctcaaccggatccgaagacgccaccgctctgac
cggatcatcaggcagaaggggacccccatgaaaagtctgcaagtcagcagccccctgtct
tcatacccaagtgagcctgtggcccccccacagggaaagaggggaacgtcagccttatca
gcactgctggaaatggagcagaaccagaagagcctggaggagcagccgaagccgtctgca
gctccggccgacgtctccaccgtctccttcatagacagtcctcgcaaggacgctgccttt
attttggattttattcgtagcccccgctcctcctacatccacccttctcaggaacagttg
aataattccagcgtctgcctccagctgcccgctgaaaccacggaggctgcagaaaaagct
ggccagcctggagccggcgcagtcccgcctgcaggagacgccgcagccggcggcgccgac
gccagtgggcagtctgctgcagggacacactgtctgtcctcgtcctccaccctgctggag
atcctggaggccatcaaacacccaacgacgggcgtgcagctactccccgagcagaagggt
ctgccaccccactgcttcatcagctctgaggttgttcattggctggtcaacaacgtggag
ggtgtggccacacatgggatggcagtggatgtcatgcagaaaatgctggatgaaggcctg
gtggctcatgcttcaggagacgccatgcgcagctttatctatggcttctacttctacagg
attgtcggtgaaaaggatggcctgaccacgcagctcccggccgccgcaggaggcggctgg
tccaccacggttccggaggacttcgctctgttccagaggaaatggtttgaggtggccttc
gtgttggaggagcggcggccttcagatctgccagctttcctcctgccctggcttcctagt
cggccggcctcctatgcaagtaggcacagctcgttcagccgcagctttggaggacgcagc
caggccgccgctctgctagctgccaccgtcccagagcagaagacggtcacgctggatgtg
gacgtcaacaaccgcagcgaccgcaccgagtggtgcagctgttattaccacggcaacttc
tccctgaacgccgcctttgagatcaagctgcactggatggcggtgacggcggccgtgctc
tttgagatggttcagggctggcacaggaaagccgcctcctgcggcttcctgctggttcct
gttctggaggtccctttcgccctgacgacctacctgtacggcgacccgctgagggcgcac
ctcttcatccctctgtgcatccagtgcctgctgaagaacagcagcgacagcctgtttgaa
ggttttgagccggagacgtactgggagaggatgcagctctttcaggaggccatactgtac
aggtttggttttgttcaagacaagttttctgcgtcgggctttaactttccctcggagagc
aagcctcagtacatccacgtcacaggcaccgtctttctgcagctgccctactccaaaagg
aagtactccagcgggcagcagcgcaggcgcaggaactccaccacctccaacagccagggg
ccctttgggggggaggacagggtgggcttctactgggcctacaacaccatgctgaccaaa
gcctggaggacgggactgctgggagatgagaggctggctgaccgcctgctccgagacttc
accgacttctgcgccaacaaggacaacaggctgcagaacctgtgggacagctgtcaggag
aaaatgaacgccagcgccccctag
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