Oryzias latipes (Japanese medaka): 101160323
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Entry
101160323 CDS
T02443
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04120
Ubiquitin mediated proteolysis
ola04137
Mitophagy - animal
ola04144
Endocytosis
ola04340
Hedgehog signaling pathway
ola04350
TGF-beta signaling pathway
ola04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101160323
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
101160323
04350 TGF-beta signaling pathway
101160323
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101160323
04137 Mitophagy - animal
101160323
09144 Cellular community - eukaryotes
04520 Adherens junction
101160323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101160323
04121 Ubiquitin system [BR:
ola04121
]
101160323
03029 Mitochondrial biogenesis [BR:
ola03029
]
101160323
Enzymes [BR:
ola01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
101160323
Membrane trafficking [BR:
ola04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
101160323
Autophagy
Mitophagy
Other mitophagy associated proteins
101160323
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
HECT type E3
101160323
Mitochondrial biogenesis [BR:
ola03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
101160323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
101160323
NCBI-ProteinID:
XP_004071867
UniProt:
A0A3P9K7B1
H2MJY4
LinkDB
All DBs
Position
8:complement(20600789..20665463)
Genome browser
AA seq
770 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVRNTLDPK
WNQHYDLYIGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDLNKL
SPNDSDTVRGQIVLSLQSRDRIGTGGPVVDCSRLFDNDLPDGWEERRTASGRIQYLNHIT
RTTQWERPTRPASEYSSPGRPLSCIVDENTPVSTNGATPTTVLPPSNGDQRVQERRVRSQ
RHRNYMSRTHLHTHPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEEL
GPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNPSSNGSRGNNESQNVSR
QNQMKDQAQQALVSPSQLPEEAECLTVPKYKRDLVQKLKILRQELSQQQPQAGHCRIEVS
REEIFEESYRQVMKMRPKDLWKRLMVKFRGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQ
YSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKPIT
LDDMESVDPDLHNSLVWILDNDITGVLDHTFCVEHNAYGEIIQHELKPNGKSIPVTQETK
KEYVRLYVNWRFLRGIEAQFLALQKGFNEVIPQHLLKAFDEKELELIVCGLGKIDIHDWK
GNTRLKHCTPDSNIVKWFWKAVEFFDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLF
TIHQIDASTNNLPKAHTCFNRIDIPPYETYDKLYDKLLTAIEETCGFAVE
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaccaaggagttcggcggaatggccccgtgaagctgcgactaacagtcctgtgt
gccaaaaaccttgcgaagaaggacttcttccgcctcccagatccctttgccaaagtagtt
gtggatggttctggacaatgccactctacagacactgtgaggaacacacttgatcccaag
tggaaccagcactatgatctatacatcgggaaatcagactccatcaccatcagtgtatgg
aatcacaagaagattcacaagaaacaaggggctgggttcttaggctgtgtccgccttctg
tccaacgctatcaaccgccttaaagacacaggctatcagagactagacttgaacaagctt
agccccaacgacagcgacacagtgaggggccagatagtgctgagtctgcagtcgagggac
cgcataggaaccggaggtcctgttgtagactgcagtcggctgtttgacaacgatcttccg
gatggctgggaggagaggaggacggcgtccgggcgaatccagtacttgaaccacatcacg
cgcaccacacagtgggagaggcctaccaggcctgcctcagagtactccagtcctggccgg
ccgctcagctgcatcgtagacgagaacacgccagtgagcacaaacggcgccacgcccacc
acagtgttaccgccaagtaatggcgaccagcgggttcaagagagacgggtcagatctcag
aggcaccgcaactacatgagcagaacccacctgcacacgcatccagaccttcctgaggga
tatgagcaaaggacgacacagcaaggccaagtttactttcttcacactcagaccggggtc
agcacgtggcacgaccccagggtacccagagacctgagtaacgtaaactgtgaggaacta
ggtcctttgccaccaggatgggagataaggaacaccgccacagggagggtttacttcgtc
gaccacaacaaccgaaccacacagttcacagacccacgcctttccgctaacctacacctt
gtcttaaatccaagttccaatggctctcgaggaaacaatgaaagtcaaaatgtcagtcgt
cagaaccagatgaaggatcaggcccagcaggctctggtgtcccccagtcagctcccagag
gaggcggagtgtctaacagtccccaaatacaagagggatcttgtccagaagctgaagatc
ctccggcaggagctgtcccagcagcagcctcaggcgggccactgtcgcatcgaggtgtcc
cgtgaggagatctttgaggaatcgtatcgacaagtgatgaagatgaggccgaaggacctg
tggaaaaggcttatggtaaagtttagaggtgaagaaggcctggactacggaggagtggcc
agggaatggctctacctgctgtcgcatgagatgctgaacccgtactacggcctgttccag
tactcacgagacgacatctacacactgcaaatcaatccagactctgctgtcaatcccgag
cacttgtcttactttcacttcgtgggccgcatcatgggaatggcggtgttccacggccac
tacatagacggaggtttcactttacccttctacaaacagctgctcggtaaacccatcacc
ctggatgacatggagtctgttgaccccgacctgcacaacagccttgtttggatcctggac
aatgacatcacaggtgtgctggaccacaccttctgcgtggaacacaatgcttacggagag
atcattcagcacgagctcaagcccaacggtaaaagcatccccgtcacacaggaaaccaag
aaagagtatgtccgcctctacgtcaactggcgttttctgcgaggcatcgaggcccagttt
ctggctctgcagaagggcttcaatgaggtcatcccccagcacctgctcaaggcctttgac
gagaaagagctggagctgatcgtgtgcggcctggggaagatcgacatccacgactggaaa
ggcaacacgcgcctgaaacactgcacgcccgacagcaacatcgtcaaatggttctggaaa
gctgtggagtttttcgatgaagagcgcagagcgcggctgctgcagttcgtcacaggttct
tccagagttcccctgcaagggttcaaggctcttcaaggtgctgctggcccacgactcttc
acgatccaccagatcgacgccagcaccaacaacctgcccaaagcccacacctgtttcaac
cggattgacattccaccttatgagacctacgacaaactgtacgacaagctgctcactgcc
atcgaggagacgtgtggcttcgccgtggagtga
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