Oryzias latipes (Japanese medaka): 101160329
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Entry
101160329 CDS
T02443
Name
(RefSeq) semaphorin-6D isoform X1
KO
K06842
semaphorin 6
Organism
ola
Oryzias latipes (Japanese medaka)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
101160329
NCBI-ProteinID:
XP_011479227
UniProt:
H2L6P8
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Position
11:complement(3897889..4069380)
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AA seq
1157 aa
AA seq
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MEVTSRLLLWRSPLLLPLLLLPLTSRFLSESASTTTFPKDLEPLVVVSSEHSYRYPGFQG
LLQDNDTLRLGLDFQRMLRINHMLYIAARDHVFAVNLTTASEDFVPQLKLTWKSKDVSKC
TVRGKNSDECYNYVKVLVPRNDETLFACGTNAFNPTCRNYKMTSMEQVGEEVVGQARCPF
ESGQSNVGLFAGGDFYSATMTDFLASDAVIYRSLGDDRPVLRTVKYDSKWLREPHFLHAI
DYGNYVYFFLSEIAVEYTALGKMVFSRVARVCKNDNGGSPRVLDRYWTSFLKARLNCSVP
GDSFFYFDVLQSLTNVLQINQRPAVVGVFTTQANSIPGSAVCAFYMDDIERVFNGKFKEQ
RTSDSSWTPVPEEQVPRPRPGTCAGDGPASDYKSSVEFPDEMLTFIKSYPLMDEAVSSAN
DRPCFTRTSSRSKLTQIVVDVSAGPNKDRTVMFLGSDDGRVLKVLARTHSNDSFGSKLLE
DIDVYNPSKCNVQGQEDRRVLGLELDKDHHALFVAFSSCVIRVPLSRCSKHGACKTACLA
SRDPYCIWLHTGTCVNVAPGFKAGFEQDIEGNHSGSCHSDVRATTRNQESAADSAYGVRR
LPETDQRASANVHYTLLIACVLVAFFLGAILSGFLVSCYCSRSSSHRARRLGKDPEASLP
HALSLRSLAKLNGLLDGQPKEDKLDVSTPKMYSSFIPNGRAEPHLHDPGHQGLQLGDPEL
SLSQSLSQGDGELSGLPTPDSTPELHVRSLKAVRHHPYEKSQDCGGGARDSSHKSGPSSS
ASAHGFMAVVGSSLNQPVFPFSHHNPNALSNGAAHREGASSTSLHLLEERKIDERGTAAS
ASGGGGGGRVPPHHHSQQSLPQTVVDVSALDELLKHIHEVSASGTGGIKVLTSTSSSSLF
PGPSSSSGGGHHNLHHHHHHTPHSQPRTHHSNHSLHHSNHHNSSSSSSQHHQQQIPETES
ASYYSTAALPGGGVPKRLDTAAPNSTSSSSSSSSSSNNPTSSTSIPSSSSSSSSTPLQQQ
VIPEQPGEAALSVTRHQPQRHSIIKMGSGGGAVPRHHSFNQRGGHAHFLARMNTNSSSNG
PPSTAAGRNTSINGESQRQSVASACLTRQHSYSGGPHVQRAAIIRRTVSLKPKVPPKPLF
LPNTAAAPVEEAGKYNY
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgaccagccggctgttgctgtggcggtctccactgctgctgccgctgctgctt
ctccccctcacgtcccgcttcctgtccgagtcggcatcgaccacgactttccccaaagac
ctggagcctctggtcgtggtcagctcggagcactcgtacaggtatccgggctttcaggga
ttgcttcaggacaacgacacgctgcgtctgggtctggactttcagagaatgctgcgcatt
aatcacatgctctatatcgcagctagggatcacgtgtttgcggtgaacctaacgacagct
tcagaagattttgttccccagctgaaattaacatggaagtccaaagatgtcagcaagtgt
acagttagagggaagaacagcgatgagtgctacaattatgtcaaagtgttggttcccaga
aatgacgagacgttgttcgcctgcgggaccaatgccttcaaccccacctgtcggaattat
aagatgacctccatggagcaggtcggggaggaagtggtgggtcaggctcgctgtccgttt
gagtccggtcagtccaatgttggactctttgctggcggagatttctactctgctaccatg
acggactttctggccagcgatgctgtcatctacagaagcctgggagatgaccggcccgtt
ctcaggaccgtcaaatacgactccaagtggctgcgagagccgcacttcctgcacgccatt
gactacgggaactatgtctactttttcctgagtgagatcgcagtggaatacacggctctg
ggcaagatggtgttttctcgagttgctcgcgtttgtaagaatgataacggaggatctccc
agagttctggacagatactggacgtcctttctgaaggctcgtctaaactgctccgttcct
ggagattccttcttctactttgacgtccttcagtctctcaccaatgtcctccagatcaac
cagaggcctgcagtcgttggggtgttcaccactcaggctaacagcataccaggctctgca
gtttgtgctttctacatggacgacatagaaagagtctttaacggaaagttcaaggagcag
agaaccagcgactcatcatggactccagtacccgaagagcaggttcccagaccaaggcct
ggtacctgtgcaggtgatggtccagcttcagactataagtcatcagtcgagttcccagat
gagatgctgacttttatcaagtcataccctttgatggatgaagcagtttcctccgctaat
gaccgtccctgcttcaccaggacctctagcaggtccaaattgactcagatagtggtggat
gtttctgccggtcccaataaggaccgcactgtgatgttcttgggttctgatgatgggaga
gtgctgaaagttttggccagaacccattcaaacgacagcttcgggtccaaactcctggag
gacatagatgtctacaacccatcaaaatgtaatgttcagggtcaggaggacagaagggtc
ctgggattggagctggacaaggaccaccatgccttgtttgtggccttcagcagctgcgtc
atcagagttcctctcagccgctgcagcaagcatggcgcctgcaaaacagcctgcttggcc
tcccgtgacccctactgcatctggcttcacactggaacttgcgtcaacgtggcgccgggc
ttcaaagccgggtttgagcaggatatcgagggcaaccactccggcagctgccactctgat
gtgcgagcgacaacacgaaaccaggagtctgcagctgactccgcctacggcgttcgccgt
cttccagagacagaccagcgagccagcgctaacgtccactacaccctgctgatagcgtgc
gttctggtggcgttcttcctgggagccatcttgtcgggtttcctggtgtcgtgttactgc
agccgcagctcctcccaccgggccaggaggctggggaaggaccccgaggcgtccctgcct
cacgctctgtcgctacgatccttggctaaactcaacgggctgctggacggacagccaaag
gaagacaaactggatgtttccacccccaaaatgtacagttctttcattcctaacgggcgt
gccgagccccacctgcacgacccgggccaccagggcctgcagctgggggacccagagctc
agcctgtcccagtctctgtctcagggggacggggagctctccggcctgccaactccagac
tccaccccggagctccacgtcaggagcctgaaggccgtccgccatcatccgtacgagaag
agccaggactgcggcggcggcgccagggacagcagccataagtcgggccccagctcctcc
gcatccgctcacggcttcatggctgttgtcgggagctctctgaaccagccggtgtttccc
ttctctcaccacaaccccaacgctctgagcaatggagcggctcaccgcgaaggcgcatcc
tcaacgtcgctgcatctcctggaggagaggaagatcgatgagcgaggcacggcagcatca
gcatcaggcggaggaggaggaggaagagtcccacctcatcaccactcccaacagtccctt
ccccaaacagtggtggacgtttctgcgctggacgagctgctcaagcacatccacgaggtc
agcgcgtcgggaaccggaggcatcaaggtcctcacctccacctcctcctcctcgctgttc
ccggggccgtcgtcctcctctggaggaggacaccacaaccttcatcaccaccatcatcac
actccccacagccagcctcgcactcaccacagcaaccacagtcttcaccatagcaaccac
cacaacagcagcagcagcagcagtcagcatcaccagcagcagatccccgagacggagtct
gcttcctattacagtaccgccgctctgccaggagggggcgtccccaaacgcctggacacc
gccgctccaaactccacctcatcctcatcttcctcctcctcatcctccaataaccccacc
tcctccacatctatcccttcttcctcctcctcttcctcctcaactcctcttcaacagcag
gtcattcctgagcagcccggggaggcggcgctttcggtgacacgtcatcagcctcagcgc
cactccatcatcaaaatgggtagtgggggcggtgccgtcccccgccaccatagctttaac
caacggggggggcacgcgcactttctggccaggatgaacacaaacagcagcagcaatgga
cctccgagcaccgccgccggcaggaacaccagcattaacggcgagagccagcggcagtcg
gtcgccagcgcttgcctgacgcggcagcacagctacagcggcgggccgcacgtgcagcgg
gcggcaatcatccgaagaacagtgtccctcaaacccaaagttccgccaaaaccactcttt
ctgccaaacacagcggcggcgcccgtcgaagaggcgggaaagtacaactactga
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