KEGG   Oryzias latipes (Japanese medaka): 101160329
Entry
101160329         CDS       T02443                                 
Name
(RefSeq) semaphorin-6D isoform X1
  KO
K06842  semaphorin 6
Organism
ola  Oryzias latipes (Japanese medaka)
SSDB
Motif
Pfam: Sema PSI
Other DBs
NCBI-GeneID: 101160329
NCBI-ProteinID: XP_011479227
UniProt: H2L6P8
LinkDB
Position
11:complement(3897889..4069380)
AA seq 1157 aa
MEVTSRLLLWRSPLLLPLLLLPLTSRFLSESASTTTFPKDLEPLVVVSSEHSYRYPGFQG
LLQDNDTLRLGLDFQRMLRINHMLYIAARDHVFAVNLTTASEDFVPQLKLTWKSKDVSKC
TVRGKNSDECYNYVKVLVPRNDETLFACGTNAFNPTCRNYKMTSMEQVGEEVVGQARCPF
ESGQSNVGLFAGGDFYSATMTDFLASDAVIYRSLGDDRPVLRTVKYDSKWLREPHFLHAI
DYGNYVYFFLSEIAVEYTALGKMVFSRVARVCKNDNGGSPRVLDRYWTSFLKARLNCSVP
GDSFFYFDVLQSLTNVLQINQRPAVVGVFTTQANSIPGSAVCAFYMDDIERVFNGKFKEQ
RTSDSSWTPVPEEQVPRPRPGTCAGDGPASDYKSSVEFPDEMLTFIKSYPLMDEAVSSAN
DRPCFTRTSSRSKLTQIVVDVSAGPNKDRTVMFLGSDDGRVLKVLARTHSNDSFGSKLLE
DIDVYNPSKCNVQGQEDRRVLGLELDKDHHALFVAFSSCVIRVPLSRCSKHGACKTACLA
SRDPYCIWLHTGTCVNVAPGFKAGFEQDIEGNHSGSCHSDVRATTRNQESAADSAYGVRR
LPETDQRASANVHYTLLIACVLVAFFLGAILSGFLVSCYCSRSSSHRARRLGKDPEASLP
HALSLRSLAKLNGLLDGQPKEDKLDVSTPKMYSSFIPNGRAEPHLHDPGHQGLQLGDPEL
SLSQSLSQGDGELSGLPTPDSTPELHVRSLKAVRHHPYEKSQDCGGGARDSSHKSGPSSS
ASAHGFMAVVGSSLNQPVFPFSHHNPNALSNGAAHREGASSTSLHLLEERKIDERGTAAS
ASGGGGGGRVPPHHHSQQSLPQTVVDVSALDELLKHIHEVSASGTGGIKVLTSTSSSSLF
PGPSSSSGGGHHNLHHHHHHTPHSQPRTHHSNHSLHHSNHHNSSSSSSQHHQQQIPETES
ASYYSTAALPGGGVPKRLDTAAPNSTSSSSSSSSSSNNPTSSTSIPSSSSSSSSTPLQQQ
VIPEQPGEAALSVTRHQPQRHSIIKMGSGGGAVPRHHSFNQRGGHAHFLARMNTNSSSNG
PPSTAAGRNTSINGESQRQSVASACLTRQHSYSGGPHVQRAAIIRRTVSLKPKVPPKPLF
LPNTAAAPVEEAGKYNY
NT seq 3474 nt   +upstreamnt  +downstreamnt
atggaagtgaccagccggctgttgctgtggcggtctccactgctgctgccgctgctgctt
ctccccctcacgtcccgcttcctgtccgagtcggcatcgaccacgactttccccaaagac
ctggagcctctggtcgtggtcagctcggagcactcgtacaggtatccgggctttcaggga
ttgcttcaggacaacgacacgctgcgtctgggtctggactttcagagaatgctgcgcatt
aatcacatgctctatatcgcagctagggatcacgtgtttgcggtgaacctaacgacagct
tcagaagattttgttccccagctgaaattaacatggaagtccaaagatgtcagcaagtgt
acagttagagggaagaacagcgatgagtgctacaattatgtcaaagtgttggttcccaga
aatgacgagacgttgttcgcctgcgggaccaatgccttcaaccccacctgtcggaattat
aagatgacctccatggagcaggtcggggaggaagtggtgggtcaggctcgctgtccgttt
gagtccggtcagtccaatgttggactctttgctggcggagatttctactctgctaccatg
acggactttctggccagcgatgctgtcatctacagaagcctgggagatgaccggcccgtt
ctcaggaccgtcaaatacgactccaagtggctgcgagagccgcacttcctgcacgccatt
gactacgggaactatgtctactttttcctgagtgagatcgcagtggaatacacggctctg
ggcaagatggtgttttctcgagttgctcgcgtttgtaagaatgataacggaggatctccc
agagttctggacagatactggacgtcctttctgaaggctcgtctaaactgctccgttcct
ggagattccttcttctactttgacgtccttcagtctctcaccaatgtcctccagatcaac
cagaggcctgcagtcgttggggtgttcaccactcaggctaacagcataccaggctctgca
gtttgtgctttctacatggacgacatagaaagagtctttaacggaaagttcaaggagcag
agaaccagcgactcatcatggactccagtacccgaagagcaggttcccagaccaaggcct
ggtacctgtgcaggtgatggtccagcttcagactataagtcatcagtcgagttcccagat
gagatgctgacttttatcaagtcataccctttgatggatgaagcagtttcctccgctaat
gaccgtccctgcttcaccaggacctctagcaggtccaaattgactcagatagtggtggat
gtttctgccggtcccaataaggaccgcactgtgatgttcttgggttctgatgatgggaga
gtgctgaaagttttggccagaacccattcaaacgacagcttcgggtccaaactcctggag
gacatagatgtctacaacccatcaaaatgtaatgttcagggtcaggaggacagaagggtc
ctgggattggagctggacaaggaccaccatgccttgtttgtggccttcagcagctgcgtc
atcagagttcctctcagccgctgcagcaagcatggcgcctgcaaaacagcctgcttggcc
tcccgtgacccctactgcatctggcttcacactggaacttgcgtcaacgtggcgccgggc
ttcaaagccgggtttgagcaggatatcgagggcaaccactccggcagctgccactctgat
gtgcgagcgacaacacgaaaccaggagtctgcagctgactccgcctacggcgttcgccgt
cttccagagacagaccagcgagccagcgctaacgtccactacaccctgctgatagcgtgc
gttctggtggcgttcttcctgggagccatcttgtcgggtttcctggtgtcgtgttactgc
agccgcagctcctcccaccgggccaggaggctggggaaggaccccgaggcgtccctgcct
cacgctctgtcgctacgatccttggctaaactcaacgggctgctggacggacagccaaag
gaagacaaactggatgtttccacccccaaaatgtacagttctttcattcctaacgggcgt
gccgagccccacctgcacgacccgggccaccagggcctgcagctgggggacccagagctc
agcctgtcccagtctctgtctcagggggacggggagctctccggcctgccaactccagac
tccaccccggagctccacgtcaggagcctgaaggccgtccgccatcatccgtacgagaag
agccaggactgcggcggcggcgccagggacagcagccataagtcgggccccagctcctcc
gcatccgctcacggcttcatggctgttgtcgggagctctctgaaccagccggtgtttccc
ttctctcaccacaaccccaacgctctgagcaatggagcggctcaccgcgaaggcgcatcc
tcaacgtcgctgcatctcctggaggagaggaagatcgatgagcgaggcacggcagcatca
gcatcaggcggaggaggaggaggaagagtcccacctcatcaccactcccaacagtccctt
ccccaaacagtggtggacgtttctgcgctggacgagctgctcaagcacatccacgaggtc
agcgcgtcgggaaccggaggcatcaaggtcctcacctccacctcctcctcctcgctgttc
ccggggccgtcgtcctcctctggaggaggacaccacaaccttcatcaccaccatcatcac
actccccacagccagcctcgcactcaccacagcaaccacagtcttcaccatagcaaccac
cacaacagcagcagcagcagcagtcagcatcaccagcagcagatccccgagacggagtct
gcttcctattacagtaccgccgctctgccaggagggggcgtccccaaacgcctggacacc
gccgctccaaactccacctcatcctcatcttcctcctcctcatcctccaataaccccacc
tcctccacatctatcccttcttcctcctcctcttcctcctcaactcctcttcaacagcag
gtcattcctgagcagcccggggaggcggcgctttcggtgacacgtcatcagcctcagcgc
cactccatcatcaaaatgggtagtgggggcggtgccgtcccccgccaccatagctttaac
caacggggggggcacgcgcactttctggccaggatgaacacaaacagcagcagcaatgga
cctccgagcaccgccgccggcaggaacaccagcattaacggcgagagccagcggcagtcg
gtcgccagcgcttgcctgacgcggcagcacagctacagcggcgggccgcacgtgcagcgg
gcggcaatcatccgaagaacagtgtccctcaaacccaaagttccgccaaaaccactcttt
ctgccaaacacagcggcggcgcccgtcgaagaggcgggaaagtacaactactga

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