Oryzias latipes (Japanese medaka): 101160409
Help
Entry
101160409 CDS
T02443
Name
(RefSeq) contactin-3
KO
K06761
contactin 3/4/5/6
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ola04515
]
101160409
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ola00537
]
101160409
Cell adhesion molecules [BR:
ola04515
]
Immunoglobulin superfamily
Contactins
101160409
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ola00537
]
Others
101160409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_4
Sp38
Ig_C17orf99
V-set_CD47
Izumo-Ig
C2-set_3
Tissue_fac
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
101160409
NCBI-ProteinID:
XP_011475246
LinkDB
All DBs
Position
7:9412054..9462848
Genome browser
AA seq
1026 aa
AA seq
DB search
MTLPWKQLLLLSIIDCLTDCLDSGSYHGPRWRMEPGDLFIPVDSIEEEATLTCDAKGTPA
PQYRWSLNGTLINLSLDRRRRLSGGNLIISSLDRYQDVGIYQCMAYNTVGAVLSRRASLQ
FAYLDHFKVHTRSAVSVREGQGVVLLCGTPTSSGDLTYAWVFNEYPYFVQQDNRRFVSQQ
TGNLYISKVEPSDVGNYTCVVMNSITKGKVHSSPTSLNLRTDGVMGEYEPKIEVHFSDNV
PAAKGTTVTLECFALGNPVPEITWRRANGIPFPSKVKMKYSNAVMEIPSFQQDDAGGYEC
VAENKMGKNTAAGRLAFYAKPQWIQTMKDTALAIEERLNWECRANGKPKPSYTWLKNGQQ
LLSDDRTDVEDGVLSVSMLTLTDAGMYQCVAENKHGVIYFAAELMVLASPPDFTGNVLRS
LLKAKAGTTVTLECKPKAYPTANILWKKGNLPVQTNDRVTLSPDGTLRLANVSKSDAGSY
TCFARNRFGMSSTTGRLLVTDPTRFIQGPVDMEIIVGESIVLPCQITSDPVLDVSFSWAF
NGQLIAKGDGHFELVGGRTAGDLMIRNIQLYHSGKYICVVDTDVESLSAVAVLIVKGAPS
PPDSVTVEEVTDSTAQLAWSPGRDNGSPITNYLIQTRTPFTVGWQRVNTVPEIISGNTLT
ATVVDLNAWVEYEFRVLAKNSVGVGEPSPISVKTRTEDAVPDVAPGDVGGGGGSRSELVI
TWEPVPEELQNGESFGYIIAFRAFGEVSWIHVATSAPGASRYVYRNDSIAPFSPFHVKVG
TYNSKGQGPFSPVVTIYSAETEPSGMPVGVWARSVSASEIEVNWQALSITPERVLGYEVV
YWEDDTKPETMGKVRVPWNQTSVTVSGLAGNSQYFLTVSAFNTAGTGPFLPAINVTTKKP
PPAQPPLNVEWTLIGSQLSLYWEPVVAMESESEVKGYQLSYRRQRHKEVNTLTTSNSTAE
LTLPEGDDDYIIRIQTTSEGGLGPASDPIRIHKLSMSARGSRAWSADVSPVSLFLAMLMS
TFRSTL
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgccatggaaacaacttctgctgttatcaatcatcgactgtctgacagattgt
ttggacagtggatcatatcatggcccacgctggaggatggagccaggtgacttgtttatt
cctgtcgattccatagaagaagaagccacgctgacgtgtgacgctaagggaacgccggct
cctcaatacagatggtcactgaacgggactctcataaatctgagtctggatcggcggcgg
cgtctgtctgggggcaacctcattataagcagtctggatcgctaccaggatgttgggatt
taccagtgtatggcctacaacactgtaggagccgtcctcagccggagagccagtctacag
tttgcctacctagatcatttcaaagttcacaccaggagcgctgtgtcagtccgagaaggg
cagggagtggtgttactgtgtggaacgcctacatcctcaggagacctaacctatgcatgg
gtcttcaatgagtacccatactttgttcagcaagacaatcggcgctttgtctcccagcag
acaggaaacctttacatctccaaggtggagccatctgatgtgggtaactacacttgtgta
gtgatgaacagcatcacaaaaggcaaggttcacagctcacccacctccctgaacctcagg
acagatggagtcatgggtgaatatgagccaaaaatagaggttcatttctcagacaatgta
cctgctgcaaaaggaacaactgttactctggagtgtttcgcccttgggaaccccgtccca
gaaatcacctggaggagagcaaatggaattccctttcccagcaaagttaaaatgaagtac
tccaatgctgtaatggagatccccagcttccagcaggacgatgcaggcggctacgagtgt
gtggctgagaacaagatgggcaaaaacacagcagcaggtcgtttggccttttatgccaaa
cctcagtggattcagaccatgaaggacaccgctctggccatagaggagagactgaactgg
gagtgcagagctaatggcaagcccaagccctcctacacgtggctgaagaacggccagcag
ctcctttcagatgacaggaccgatgtggaggatggggtcctgtcggtgtcgatgctgaca
ttaacagatgctggcatgtaccagtgtgtggctgagaataaacacggtgtcatctatttt
gctgctgaattaatggttctagcttctcctccagacttcacagggaacgtcctcagatct
ttgctcaaagccaaggcaggaactaccgtgactttggaatgtaagcccaaggcctatccc
acagccaacattttatggaagaaaggaaaccttcctgtccagaccaacgacagggtcaca
ctttctccagacggaactctgaggcttgcaaacgtaagcaagtcggatgcaggcagctac
acgtgctttgcgaggaatagatttggcatgtcaagcacaactggaaggctcctggttacg
gatccaaccagatttatccaggggccggtggacatggagatcatcgtgggtgagagcatt
gtgttgccctgccagatcaccagtgatcccgtacttgatgtttccttctcctgggccttc
aatggacagctgatcgccaaaggagatggtcactttgagcttgttggagggagaacagca
ggagatctgatgatcaggaacattcagctttaccattctggcaaatacatctgcgtggta
gatactgatgtggagagcctgtcagccgtggctgtattgatcgtgaaaggcgcccccagt
cctccagactcagtgactgtggaggaagtgacagacagcacggcccagctggcgtggagc
cccggcagagacaacggcagccccattaccaattacctcattcaaaccagaactcctttc
actgtgggctggcagagggttaacacagtaccggagatcatcagtgggaacactctgaca
gccactgtggtggacctcaacgcctgggtggagtatgaattcagggttctggccaaaaac
agcgttggggttggagaacccagtccaatttccgtcaagacgaggacggaggatgctgtt
ccagatgtggcaccgggagatgtgggtggaggaggtggcagtagatctgagttggtcatc
acttgggagcctgttcctgaagaactgcagaatggcgaaagctttggctacatcattgct
ttccgtgccttcggagaagtcagctggattcacgtggccacttctgcccccggtgcatcc
cgctatgtgtaccgcaacgacagcatcgcgcccttctctccattccatgtcaaggttggc
acttacaacagcaaaggacagggtcctttcagcccagtggtcaccatctactctgcagag
acggagccaagtggaatgccagtgggagtttgggccagaagtgtctcagcctcggagatt
gaggtgaattggcaggctctctccatcactcctgaaagagttctgggctatgaggtggtc
tactgggaggacgacacaaaaccggagaccatgggaaaggtccgggtgccttggaaccaa
acttcggtcacagtgagcggcttggcaggaaactcgcagtatttcctaacagttagtgcc
ttcaacacagcaggcaccggcccgtttcttcctgcaatcaacgtcaccacaaaaaaacca
cctccagctcaacctccactgaatgttgaatggacactaattggctctcagctgtcgctt
tactgggagcctgtggtggcaatggaatcggagtctgaagttaaaggctatcaactttca
tacaggaggcagagacacaaagaggtaaacactctcacaacaagcaattcaacagcggag
ctgaccctccccgagggtgacgatgactacatcatccgcattcagaccacgagtgaagga
ggtctggggccagcctcagatcccatacgaatacacaaactaagtatgagtgcccgcggc
tccagagcctggagtgcagacgtctcccccgtctccttgtttctcgccatgttaatgtca
acgttcaggtcaacattgtga
DBGET
integrated database retrieval system
