Oryzias latipes (Japanese medaka): 101160578
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Entry
101160578 CDS
T02443
Symbol
cnot8
Name
(RefSeq) CCR4-NOT transcription complex subunit 8
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101160578 (cnot8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101160578 (cnot8)
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101160578 (cnot8)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
101160578 (cnot8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
101160578
NCBI-ProteinID:
XP_004076866
UniProt:
H2MLD0
A0A3P9LXL4
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All DBs
Position
14:29380822..29386173
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AA seq
285 aa
AA seq
DB search
MPAALQDSSQMICEVWASNVGEEMRKIRQIIQSYNYVAMDTEFPGVVVRPIGEFRSTVDY
QYQLLRCNVDLLKIIQLGLTFMNEDGDYPPGTTTWQFNFKFNLTEDMYSQDSIDLLQNSG
LQFKKHEEEGIDTLYFAELLMTSGLVLCENVKWLSFHSGYDFGYLVKLLTDARLPEEEHE
FFQILNLFFPAIYDVKYLMKSCKSLKGGLQEVADQLELKRIGRQHQAGSDSLLTGMAFFR
MKELFFEDNIDDAKYCGRLYGLGSGSSQPQNGLAGSTGDEANNKH
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgctcttcaagattccagccagatgatctgtgaagtctgggcgagcaacgtg
ggggaagagatgaggaagatacggcaaattatccaaagctacaactacgttgccatggac
acggagtttcccggagtcgtggtccgacccataggcgagtttcgcagtacggtagattac
cagtaccagctgctgcggtgcaacgtggatctgctgaagatcatccagcttggtctcaca
ttcatgaacgaggatggggattacccccccggcacgaccacgtggcaattcaacttcaag
ttcaacctgactgaggatatgtactcccaggactccatagacctgctccagaactcgggt
ctgcagttcaaaaaacacgaagaagaaggaatcgacacgctgtacttcgccgagctcctc
atgacgtcgggtctggttctgtgtgagaacgtcaagtggctgtccttccacagtggttat
gactttggctatctggtgaaactcctgacggatgcgcggcttccagaggaggaacacgag
ttctttcagatcttaaacttgttttttcctgcaatttacgatgtgaagtatttgatgaag
agctgcaaaagtctgaagggggggttgcaggaagtggccgatcagctggagctgaagagg
attggccggcagcatcaggcggggtcggattcgctgctcacgggcatggctttcttcagg
atgaaggagcttttcttcgaggacaacatcgacgacgccaaatactgcgggaggctgtac
ggcctcggctccggctccagtcagccgcagaacggcctcgccggctccacgggcgatgag
gccaacaacaagcactga
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