Oryzias latipes (Japanese medaka): 101160588
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Entry
101160588 CDS
T02443
Name
(RefSeq) tripartite motif-containing protein 16
KO
K12006
tripartite motif-containing protein 16
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101160588
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101160588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
SPRY
zf-RING_2
zf-RING_5
zf-RING_10
U-box
Prok-RING_4
Baculo_IE-1
zf-RING_6
MRP-S31
Gp58
RSS_P20
DivIC
ToxN_toxin
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
101160588
NCBI-ProteinID:
XP_023821161
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Position
17:9258179..9260438
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AA seq
556 aa
AA seq
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MAQKGVDLDQETFSCSICLDLLKDPVTIPCGHSYCMKCIQGFWDEEEKIPSCPQCRKTFI
PRPVLVKNTMLANIIEKLRKTGLQAVPADLCYAGPEHVVCDVCTGRKLKAIKSCLICLAS
YCEKHLQPHLDAAAFKKHKLVEPSKNLQENICSRHDEVMKMFCRTDQKCICYLCSVDEHR
GHDTVSAAAERTERQRELEESQQQIQQRIQDREKEVKLLQQEVEAINHSADQTVKDSEKI
FTEMIRLIQKRSCDVKQQIRSQQQTEVSRVKDLQEELEQEITELKRRDAELRQFSFTEDH
SQFLLNYPSLPPLSESTHSSNINVRPLRYFEDVTAAVSELRDKLQDILREEWTNISLTVT
HVDVLEPEPEPEPKSRGDFLQYSCHITLDPNTANMRLLLSEENRKVTVMQKTQSVSDHPD
RFTDRFQVLSRESLTGRCYWEVEWRGNFVDVAVAYKNISRSGNESLFGFNDKSWSLVCSP
NSFTFHHNSIETSISAPVSSRVGVYLDHRAGVLSFYSVSESMTLLHRVQTTFTQTLHAGL
RLYGDFGDTAEFCKLK
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttgatctggatcaagaaaccttcagctgttccatctgtctggat
ctgctgaaggatccggtgactattccctgtggacacagttactgcatgaagtgtattcaa
ggattctgggatgaagaggagaaaatccccagctgtcctcagtgcaggaagaccttcata
ccgaggcctgttctggtgaaaaacaccatgttagcaaatataatagaaaagctgaggaag
actggactccaagctgttcctgctgatctctgctatgctggacctgaacatgtggtctgt
gatgtctgcactggaagaaaactgaaagccatcaagtcctgtttgatctgtctggcctct
tactgtgagaaacaccttcagcctcatttggatgcagctgcattcaagaaacacaagctg
gtggaaccctccaagaacctgcaggagaacatctgctcccgtcatgatgaggtgatgaag
atgttctgtcgcactgatcagaagtgtatctgttatctctgctctgtggatgaacataga
ggccacgacacagtctcagctgcagcagaaaggactgagaggcagagagagctggaggag
agtcaacaacaaatccagcagagaatccaggacagagagaaggaggtgaagctgcttcaa
caggaggtggaggccatcaatcactctgctgatcaaacagtgaaggacagtgagaagatc
ttcactgagatgatccgtctcatccaaaaaagaagctgtgatgtgaagcagcagatcaga
tcccagcagcaaactgaagtgagtcgagtcaaagatcttcaggaggagctggagcaggag
atcactgagctgaagaggagagacgctgagctgaggcagttctcattcacagaggatcac
agccagtttctgctcaactacccctcactgccaccactcagtgagtccacacactcatcc
aacatcaatgtccgtcctctgagatactttgaggatgtgacagcagctgtgtcagagctc
agagacaaactgcaggacattctgagagaggaatggacaaacatctcactgacagtcact
catgtggatgttttagagccagaaccagaaccagaaccaaagagcagaggtgacttctta
caatattcatgtcacatcacactggatccaaacacagcaaatatgcgactgttactgtca
gaggagaacagaaaggtgacagtgatgcaaaaaactcagtctgtttctgatcatccagac
agatttactgatagatttcaggttctgagtagagagagtctgactggacgttgttactgg
gaggtggagtggagaggaaactttgttgatgtagcagtcgcatacaagaacatcagcaga
tctggaaatgaaagtttatttggttttaatgataaatcttggtcattagtttgttctcca
aacagtttcacatttcaccataacagcatagaaacctccatctcagctcctgtttcctcc
agagtaggagtgtacctggatcacagagcaggtgttctgtccttctacagcgtctctgaa
agcatgactctcctccacagagtccagaccacattcactcagacgctccatgctggactg
aggttgtatggtgattttggagacacagcagagttctgtaaactcaaatag
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