KEGG   Oryzias latipes (Japanese medaka): 101160604
Entry
101160604         CDS       T02443                                 
Symbol
lnx2
Name
(RefSeq) ligand of Numb protein X 2
  KO
K10692  ligand of Numb protein X 1/2 [EC:2.3.2.27]
Organism
ola  Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:ola00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ola04121]
    101160604 (lnx2)
Enzymes [BR:ola01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     101160604 (lnx2)
Ubiquitin system [BR:ola04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Ligand of Numb proteins
    101160604 (lnx2)
SSDB
Motif
Pfam: PDZ PDZ_6 PDZ_2 zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-RING_5 zf-rbx1 TRAF3_RING zf-Nse
Other DBs
NCBI-GeneID: 101160604
NCBI-ProteinID: XP_004081101
UniProt: H2LY16
LinkDB
Position
20:17478593..17489602
AA seq 754 aa
MGSPGCEVDVTRPTEPTPETLCPECGQIHRTWENHLYNYRLEVDDDLVCHICLQPLVQPL
DTPCGHTFCARCLRSFLQERDFCPLDRTRLQLQACRRSSILVHKLLDKLSVSCPLSPVCS
LSMPRCDLEAHLKHRCPGTQSQQTSVDEPRCESVDEQAMVTSPPRSPRSPQTELRDPTPS
PHSGHGTTCGNGSVWTDDAGLDNPAFEESTEEDSVLGLDCVIPRVKRPLSNPCIHLLRSV
SSTSSGWDCPESPPLSAEEGCVKLPSLPEGEITTIEVHRANPYVELGISVVGGNETPLIN
VVIQEVYRDGVIARDGRLLAGDQILQVNNVDISNVPHSFARSTLSRPCTTLQLTVLRERR
CASRAPPSSSSSTPAVPHPPCSTPDGTPSSPTKLRITLHKRDSTEQLGIKLVRRTDESGV
FVLDLLEGGLAAKDGRLRSNDRLLAVNDQDLRHGTPEQAAQIIQASGERVYLLIGRPSKP
TPPPPPKSSSTRDLYCLEHFLPNHSSTPSPVPIHLSRTSTHRDLSQCVSCKEKHITVKKE
PHESLGMTVAGGRGSKSGELPIFVTSVQPHGCLSRDGRIKRGDVLLSINSQDLTYLSHSE
AVGTLKASAASPSVQLRVLEVIMEEEHNHDELLPHTHDSDFDANWSPSWVMWLGLPSYLH
SSHEIVLRRSHPGSWGFSIVGGYEESHGNQPFFIKTIVLGTPAYYDGRLKCGDMIVAVNG
LSTAGMSHSALVPMLKEQRSRVALTVVSWPGSLV
NT seq 2265 nt   +upstreamnt  +downstreamnt
atgggcagcccaggctgcgaggtggacgtcacacggccaacggagccaactcccgagact
ctttgtccagagtgtggtcagatccaccgaacctgggaaaaccatctctacaactaccgg
ctggaggtggacgacgacctggtgtgccacatctgcctgcaaccgctggtgcagcctctg
gacacgccgtgcgggcacaccttctgcgcccgctgcctgcgcagcttcctccaggagagg
gacttctgccctcttgacaggacgcggctgcagctgcaggcgtgccgcagatccagcatc
ctggtgcacaagctgctagacaagctctccgtttcctgccctttgagtcctgtctgctcg
ctcagcatgccccgctgtgacctggaggcacatctcaaacacaggtgtccggggactcag
agtcaacagacgagcgtggacgagccgcgatgtgagagtgtggacgaacaagcaatggtg
accagcccccccaggtcgccccgttctccacagacagagctgagggatcccactccgtct
ccacactccggacatggcaccacctgtggcaacgggtctgtgtggacagacgacgctggc
ctcgataaccccgccttcgaagaaagcacagaggaagacagtgtgttggggttggactgt
gtcatcccccgggtgaagcgacccctcagtaacccttgcatccaccttcttcgctccgta
agctccacctcctcaggctgggactgccctgagtctccacctttgtcagcagaggaaggc
tgtgtgaagctgccctccctccctgaaggagagataaccaccatcgaagtccaccgggcc
aatccgtacgttgagcttggaatcagcgtcgtcggtggaaatgagacgcctctcatcaat
gttgtgatccaggaggtgtacagggatggagtcatcgcacgagatgggaggcttctggcg
ggagatcagatactacaggtgaacaacgtggacatcagcaacgtgccgcacagttttgct
cgctccaccttgtctcggccctgcaccaccctccagctgactgtgctaagggagcgccgt
tgtgcctctcgggcacctccctcctcttcctcgtccaccccagctgtgcctcaccccccg
tgctccactcctgacggcacgccgtccagccccaccaaactgagaattacgctacacaag
cgggactcaacagagcagctcggcatcaagctggtgcgccgaacagatgagtcaggggtg
tttgtgttggatctcttggaaggaggcctggcagctaaggatggcagactgcggagtaat
gaccgccttttggcagtcaatgaccaggacctgcgccacggcacccccgagcaggctgct
cagatcatacaggccagcggagaacgagtctacctcctgattggccgacccagcaaacca
actcctcccccgccgccaaaatcaagctctactagagacctttattgccttgaacacttc
ctgcctaaccacagctccaccccgagccctgtgcccatccacttgtcccgcaccagcacc
cacagagacctgtcccaatgtgtgagctgtaaggagaaacacatcactgtgaaaaaggag
ccccacgagtctttgggcatgaccgtggctggaggccggggcagcaagagcggggagctg
ccgatctttgtgacaagtgttcaaccacacggctgcttgtcaagggatgggcggataaaa
agaggagacgtcctgctgagcatcaacagtcaagacctgacatacttgagccacagcgag
gccgtggggacgttgaaggccagtgcagcctcgccctctgtccagttgcgggtgctggag
gtcatcatggaggaggagcacaatcacgacgagctgctgcctcacactcacgacagcgac
tttgatgccaactggtctccctcgtgggtcatgtggctgggcctgccaagttatttgcac
agcagccatgagattgtgctgcggagaagtcaccctggaagctggggcttcagcattgtc
ggggggtacgaggaaagtcatggcaaccagcctttttttatcaaaaccatcgtccttggc
actccagcgtactatgatggacgtctcaaatgtggcgacatgattgtggcggttaacggc
ctatcgacagcaggaatgagccattcggcgctggtgcccatgctgaaggagcagcgcagc
cgagtggcgctaacagtggtctcctggcctggcagccttgtataa

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