Oryzias latipes (Japanese medaka): 101160778
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Entry
101160778 CDS
T02443
Symbol
gpcpd1
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1 isoform X1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
101160778 (gpcpd1)
Enzymes [BR:
ola01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
101160778 (gpcpd1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GDPD
C2_GDE1
CBM_20
PI-PLC-X
Motif
Other DBs
NCBI-GeneID:
101160778
NCBI-ProteinID:
XP_004083384
UniProt:
A0A3B3HVN8
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All DBs
Position
24:2514644..2528656
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AA seq
667 aa
AA seq
DB search
METTQVSLTVRGETSPGEVIAVVGSCETLGCWGYQRAVTLHPLGDEAHTWTGTVPIPHGV
ETKYRYFKGFFLEAKSAGDPCQVIVNMWETHHRPRTMRPTAPNQEIDDGQFGLHNGDTCV
DSGWLTCQTDVRLRLHFSKHAPVSVTKKKFKRSRFRIKLTLEGFEEEEDEDEEQSPSWQK
MTTILGISKISASGYKSRHSQPECGYGLDPSQWTEYSIHTMDPDNLELMFEFFEEDLSEH
VVQGDAHPGHVGAACLLSSSFLENGKDSGVVTLPIMGRNSRQTIGKVRVDYLVIRPIRGL
QCDMSSSYTKYWRKRSAVDVGHRGAGSTHAAKHHRVRENTIASFMSAAKHGAAFVEFDVH
LSKDGVPIVYHDLTCCISTKKKKNDKELELIEVPVKDLTFDQLQLLKLAHVTAMTGSDHK
DLEDEEEIDEHQPFPSLSQIFQAVPETVGFNIELKWISQMKDGSWDGNLSSYFNMNSFLD
TILSCVLQKAGKRRIIFSCFDPDICTMVRHKQNKYPILFLTQGISDKYPELMDIRCQNTE
IAISFAESENILGISAHTEELLKHLNYIEEAKSKGLVVFSWGDDNNDHKTRRKLREQGID
GLIYDSICDVQAEQPNIFQVEEQHSLQEVITEETLKSSACSCYSIPCPPAPCASCGSAES
DSGLSSS
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggagaccactcaggtgtcccttacagtcaggggggagacatctccaggtgaggtgatt
gcagttgttggcagctgtgaaactttgggatgttggggctaccaacgcgctgtcacctta
catcctcttggagatgaagcacacacctggaccggaaccgtcccaattcctcatggcgtc
gaaaccaaatatcgttatttcaaaggcttctttttggaagcgaagagtgcaggtgatccc
tgtcaggtgatagtcaatatgtgggagacccatcatcgcccccggacgatgaggcccaca
gcaccaaaccaggaaatagacgacggccagtttggacttcacaacggggacacttgtgtc
gactcagggtggctgacgtgccagacggacgtccgccttcgtttgcacttttccaagcac
gctcccgtgtccgtgaccaagaagaaattcaagaggtctcgcttcaggatcaagctgacg
ttggaaggctttgaggaggaagaagacgaggatgaggagcaaagtccttcttggcagaag
atgaccaccattctggggatcagcaagatcagcgccagcggctacaaatcccgtcactcc
cagccggagtgcggatacggcctggatccctcccagtggaccgagtacagcatccacacc
atggatcccgacaacctggagctcatgtttgagttctttgaggaggacctgagcgagcat
gtggtccagggggacgcccatccgggccacgtgggggccgcttgtctgctgtcctcctcg
tttttggaaaatgggaaggacagcggagtggtcacgcttcccatcatgggccggaattcc
aggcaaaccatcggaaaagtaagagtggattacctggtaatccgacccatccgggggctg
cagtgtgacatgagctcctcatacaccaagtactggaggaagaggagcgcggtggatgtg
ggccacagaggagcaggcagcacgcacgcagcaaaacaccacagagtcagagagaacaca
atcgcctcgttcatgagcgcagccaaacacggtgcagcctttgtggagtttgatgtccac
ctctccaaggacggcgttcccatcgtgtaccacgatctgacctgctgcatttccaccaag
aagaagaaaaacgacaaggagctggagctgatcgaggtcccggtgaaagatctgacgttt
gaccagctgcagcttctgaagctggctcatgtgacggcaatgacaggaagtgaccacaaa
gatctggaggacgaggaggaaatagatgaacatcagccgttcccttcgctgtctcagatc
ttccaagccgtcccggaaaccgtgggcttcaacattgagctgaaatggatcagtcagatg
aaggacggatcgtgggacggaaacctctcctcctacttcaacatgaactccttcctggac
acgatcctgtcctgtgtcctgcagaaagctggaaaaagacgcatcatcttctcctgtttt
gaccccgatatttgcaccatggtgcgtcacaagcagaacaagtatcccatcctcttcctg
actcagggcatctcagacaaataccccgagctgatggacattcgctgtcagaacactgaa
atcgccatcagcttcgcagagagcgagaacatcctgggcatcagcgctcacaccgaggag
ctcctgaagcacctcaactacatcgaagaggccaagtccaaaggcctggtggtcttcagc
tggggagacgacaacaacgaccacaagaccaggaggaagctgagggagcagggcatcgat
gggctcatctatgacagcatctgtgacgtccaagccgagcagccaaacatcttccaggta
gaggagcagcactccctgcaggaggtgatcacggaggagaccctgaagagctccgcctgc
tcctgctactccatcccgtgcccgccggcgccctgcgcgtcctgcgggagcgccgagtcc
gactcgggcctcagctcctcctga
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