Oryzias latipes (Japanese medaka): 101160886
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Entry
101160886 CDS
T02443
Symbol
rffl
Name
(RefSeq) E3 ubiquitin-protein ligase rififylin
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101160886 (rffl)
Enzymes [BR:
ola01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
101160886 (rffl)
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
101160886 (rffl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
FYVE_CARP1-2
ARMET_C
zf-RING_5
Prok-RING_4
FYVE_2
Motif
Other DBs
NCBI-GeneID:
101160886
NCBI-ProteinID:
XP_011471546
UniProt:
A0A3B3IHR8
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All DBs
Position
13:142624..150163
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AA seq
334 aa
AA seq
DB search
MFASCCNWMCVDAADGGATEDQAYTNSAFNSSQPPSPEHSCEACKGRFDTHTKKHTCVDC
KKNYCNRCSAQMGPRPRLCHTCQHFYGKLLERAELMKLKVKELRHYLHLHEVPTHLCREK
EELVDLVLGQQSSPSSSSTPETPITEAPSMTFDPPLIPHTSAAFAAAPPSPPEGQSAESE
VPPPLVETAPPEPDPQEDDQVWDGDEAPVWGRRASLSDLSGPEDIEALSVRQLKEILARN
FVDYKGCCEKWELMERVTRLYQDQQNLLEATSVGTADAITALEDGLCRICMDSPIDCVLL
ECGHMITCAKCGKRMSECPICRQFVVRAVHVFRS
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcgtcctgctgtaactggatgtgcgtggacgcggcggatggcggcgccacagaa
gaccaggcctacactaactccgccttcaacagcagccagccgccctcgccggagcacagc
tgcgaggcctgcaagggccgctttgacacgcacaccaagaagcacacctgtgtcgactgc
aagaagaactactgcaaccgctgctccgcccagatggggccccggccccgcctctgtcac
acctgccagcatttctacgggaagctgctggagcgggcggagcttatgaagctcaaggtg
aaggagctccggcattacctgcaccttcacgaggtccccacgcacctgtgcagagaaaag
gaggagctggtggatctggttctgggtcagcagtcctcgccttccagcagctccacccca
gagacccccatcacagaagccccctcgatgacctttgacccccctttgataccccacacc
tccgctgcctttgcagccgcgccaccctcccccccagaagggcagtctgctgagtccgaa
gtcccgcctcctctcgtagagacggcgccgcccgagcccgacccacaggaggacgaccag
gtctgggatggcgatgaggcgcccgtgtggggtcgccgggcctccctgtcggacctgagc
ggcccggaagacatcgaggcgctgagcgtgcggcagctgaaggagatcctggccaggaac
tttgtggactacaaaggctgctgtgagaagtgggagctgatggagagggtgacccggctg
taccaggaccagcagaacctgctggaggcgacctcggtcggcactgcagacgccatcacc
gctctggaggacgggctgtgcaggatctgcatggactcccccatagactgcgtgctgctg
gagtgcggtcacatgatcacctgcgccaagtgcggcaaacggatgagcgagtgtcccatc
tgccgccagttcgtcgtccgagccgtccacgtcttccggtcctga
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