Oryzias latipes (Japanese medaka): 101160896
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Entry
101160896 CDS
T02443
Symbol
lamb3
Name
(RefSeq) laminin subunit beta-3 isoform X1
KO
K06244
laminin, beta 3
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04510
Focal adhesion
ola04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101160896 (lamb3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101160896 (lamb3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
Laminin_I
ATG16
CENP-Q
EzrA
Laminin_II
GldM_1st
CREPT
ATG17_like
DUF948
DUF4201
Motif
Other DBs
NCBI-GeneID:
101160896
NCBI-ProteinID:
XP_011473512
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All DBs
Position
5:19889555..19910013
Genome browser
AA seq
1193 aa
AA seq
DB search
MVHFSQFWFNVGKTSDLTTSNRRPSLIPSIVWTGKDNSMKTLLLLAVISTACRAQMDCSL
GACYPPSQDLLLGRVQQLQASSTCGLTESEVFCTLYQQRRIKCCPCDSRNPNSQLAHTVQ
DVLSTSGPERWWQSKKGVTPVSLQLDLNSLFQLESLVLSFKGPRPGALVIEKTLDHGLTW
QPALYLATDCQRSFPSIPTSSPLTLEDTYCHPLKSNGPNPNQEQTIDFSPLRQYMFVPAS
HSQKVEAVSGLTGLRVKLTELGDVPQLPGRGLSQFYALKEMRVIGSCMCHGHANRCVPQD
SSVPVSPQCDCQHNTAGLNCERCADLYNDLPWRAAEDGNTQTCKRCECNNHAQSCHFDWA
LFESSGRRSGGVCDNCMHHTTGPQCDRCAPGYQPNPRSRMDRPDACIRCSCSSDGTVDGG
RCEDSPDSCRCKEKVEGPRCDRCKTGFYGLSASNPAGCSPCSCSPDGSMSDVCEPVTGQC
PCQPHFQGRTCDRCSSGYWKPALSKRCEPCSCDPTSSTSDACDQLTGQCWCRPGFGGRTC
SECPDGSYGDPLTGCQRCQCDAEGSLPGGCDKQTGACRCQPGVTGARCDSCSRGYCNAFP
SCKQCPSCFFYLDRQLRTTSLALERISKSLISRPGEGAPLDPLIQALEDQLNQIRSAVSF
PPESVSEVKDALSQLEELRKQLEQANGNLPSFEKTPGLASELAKLQDVFNQLTLIYKAKK
AVLENSISSENTGALDAIRKSYDESNEAAERVNSTRTTLQEAVAVRQETKDLQGQVQPTN
TRDLSKLNHSMASQPNLTPIAKQACGSSRLEPCTPLQCIGEDLCPPEGAPSCEKAAECVG
ALPLSRRANADAEDVKERLGRLKKKITEAAEKLQKTQEKTKEVRQSAEKLSDKIKQAKDG
FEEDLKATRGVVKELKDFLSDPSSNLTQIQEVSDWILKAKLPLSIADLRKKLDELKDLAA
NLPNSTAVLKEAEPQLDMARKLLQDAQDTRDVAVGVKADVDELLTGFSNTEGALSELEDK
LLDITDLINSLSSNLSLSEDLLSPAEKALDEASALIKPMKSQLEDLKTLLQDAGQQAQEA
EEKATEAEEEATAADQDLQNLEKQLDRLRKEAPPGTTAGSTEDRLAKLKEDAAALTNTTE
TMTQTLDGKADSLRKLQDEVLQKSSKLEGLDTKVKELLDKLRKKAHDLRVCQG
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atggttcacttctctcagttttggttcaatgtggggaagacttcagacttgacaactagc
aacagaagaccatcattgatcccctccatagtgtggactggaaaggacaacagcatgaaa
acgcttttacttctggctgtcatttctacagcatgtcgggcacagatggactgctctctt
ggggcgtgttacccccccagccaggacttgctgctgggccgggttcagcagctgcaagcc
tcctcaacctgtggtctcaccgagtctgaggtcttctgcaccctgtaccagcagaggagg
atcaagtgctgcccctgtgactccaggaaccccaatagtcagttagcccacacagtccag
gatgtcctgtcaacttctggaccagagaggtggtggcagtccaagaaaggagtgactcca
gttagccttcagctggacctcaacagtctgttccagctggaaagcctggtgctgagcttt
aagggtcctcgtcccggagctctggtcatcgagaagactctggatcacggcctgacatgg
caaccggctctgtacttagcaacagactgtcagagatcatttcccagcattcccacgtcg
tctcctctcacgctggaggacacatactgccatccgctgaagtccaacggacccaacccg
aaccaggagcagactattgacttcagccctctgcgtcagtacatgtttgttccagcctcc
cacagtcagaaggttgaagctgtgtcggggttaacggggctcagggtgaagctgaccgag
ctgggtgatgtgcctcagctgccaggaaggggtctgagccagttttacgccctcaaggag
atgagagtgattggcagctgcatgtgtcatggacacgccaaccgctgtgtgccgcaggac
agcagcgtaccggtgagtcctcagtgcgactgccagcacaacacggcgggtctgaactgt
gaacgctgcgctgacctctacaacgacctgccctggagggctgctgaggacggaaacacg
caaacctgcaaacggtgtgagtgcaacaaccatgcgcagagttgccactttgactgggcc
ctgttcgagtccagcgggcggcgcagtggaggagtgtgtgacaactgcatgcaccacacc
accgggccacagtgtgaccgctgcgccccggggtaccagccgaacccccgcagccggatg
gaccgtcctgacgcatgcatacgctgttcctgcagctctgatgggacagtggatgggggt
cgatgtgaggacagccccgactcctgccgctgcaaagagaaggtggagggcccccgctgt
gatcgctgcaaaacagggttctacggattgagtgcgtccaatcctgcaggctgcagcccg
tgttcctgttctccagatggctccatgtcagacgtgtgtgaacccgtgaccggtcagtgt
ccctgccagccccacttccagggtagaacgtgtgaccggtgctccagtgggtattggaag
ccggccctgtcaaaacgctgcgagccctgcagctgcgaccccaccagctcaaccagtgat
gcctgtgaccagctgactggtcagtgttggtgccggcccggctttggaggtcgaacgtgc
tcggagtgtccagatggctcctatggagaccctctgacaggctgccagcggtgtcagtgt
gacgctgagggttcccttcctggaggctgtgacaagcagacgggcgcctgtcgatgtcag
cctggtgtcaccggcgctcgctgtgactcctgcagtcgaggatactgcaacgctttccca
tcctgcaaacagtgtccctcctgcttcttctacctggacaggcaactaagaaccacgagc
ctggcactggagagaatctccaaaagcctcatctcccgtcctggagaaggtgctcctctg
gaccctcttattcaggccctggaggaccagctgaatcaaataaggagcgctgtctctttt
ccacctgaaagtgtttcagaagtcaaagatgctctgtctcagttagaggagctcaggaag
cagttggagcaggctaatggaaatcttccttccttcgagaaaactcctggtttggcgtca
gagttggccaaacttcaggatgtcttcaaccaactgactctgatctacaaggcaaaaaaa
gcagtcttagagaactccatcagctctgagaacacgggagcattggatgccatcaggaag
tcttacgacgagtccaacgaggcagcagagagggtgaacagcaccaggaccacgctgcag
gaggcggtcgccgtcagacaggaaaccaaagacctacagggtcaagttcagcctaccaac
accagagatctgagcaaactcaaccacagcatggcttcacagccaaacctcactcccatt
gccaaacaggcttgtggcagttctcgattagagccctgcaccccactccagtgcataggg
gaagatctgtgtcctccagagggcgctccatcctgtgaaaaggcagcagaatgtgttggc
gctcttcctctgagtcgcagggcaaatgctgatgctgaggatgtaaaagagcgattgggg
aggctgaaaaaaaagatcacagaagcagcagagaagctccagaaaacacaggagaaaacc
aaagaagtgagacagtctgctgagaagctgtctgacaaaataaagcaggccaaagatggg
tttgaagaagacctgaaggcgacacgtggagtggtaaaggagctcaaggacttcctgtca
gacccgtcctccaacctgacccaaatccaggaggtgagtgactggatactgaaagccaag
ttgcccctgagcattgctgatctaaggaagaagctggatgagctgaaggatctggcagca
aatctgccgaacagcacagcagtgctaaaagaggcggagccgcagctcgacatggccagg
aagctgctgcaggatgctcaggacaccagagatgttgcagtgggagtgaaagctgatgtg
gatgagctcctaacaggattcagtaatactgagggcgccctttctgagctggaggacaaa
ctgctggatatcacagatctcatcaacagcctaagcagcaatctgagtctgtctgaagac
ttgttgagtccagcagagaaggctctggatgaagcatcagcactgattaaaccaatgaaa
tcccagctggaagatctaaagactctgctgcaggatgcaggccagcaggcccaagaggct
gaggaaaaggcaactgaagctgaagaggaagcaactgctgctgatcaggatctgcagaac
ttggagaaacagctcgatcgcctcagaaaagaagcaccccctggaacgacagcagggtca
acagaggatcgtctcgccaaactaaaggaggacgctgcggctttgacaaacacaacagag
acgatgactcagactctggatggaaaagcagattccctcagaaaactacaggatgaagtt
cttcaaaagtccagcaagcttgaagggcttgatactaaagtcaaggagctcctggacaaa
cttcggaagaaagctcacgacttgagagtgtgtcagggctga
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