Oryzias latipes (Japanese medaka): 101160929
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Entry
101160929 CDS
T02443
Name
(RefSeq) protein jagged-1b isoform X1
KO
K06052
jagged-1
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04330
Notch signaling pathway
ola04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
101160929
04371 Apelin signaling pathway
101160929
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ola04090
]
101160929
CD molecules [BR:
ola04090
]
Proteins
101160929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MNNL
EGF
EGF_TEN
hEGF
DSL
EGF_DL_JAG
JAG1-like_EGF2
EGF_Teneurin
EGF_CA
EGF_2
cEGF
EGF_3
Motif
Other DBs
NCBI-GeneID:
101160929
NCBI-ProteinID:
XP_011480823
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Position
13:13965706..14015310
Genome browser
AA seq
752 aa
AA seq
DB search
MNRSRAHAGTSVRERSGRKRSIWKQEMRTERLQGQLQLKRTMIFLAALTMQPQVVCGGGL
FELQIRHFQNPHGLLQNGECCDLQTSGGQRCSSRDQCDTFFRACLKEYQARVASTGACTF
GVGYSGILGGNSHSSHHLRHSEGGGEGEDGTNGHIVIPFSYAWPKSFSLVLEALDYDNDT
LETGQLIERVLLSSMLNPGEQWQPYRHHGQSLSVEYWLRFRCDSNYFGPFCNKLCRARDD
FFGHFSCDPSGTKVCMEGWTGPECKEAVCRQGCHQTHGYCTVPGECKCNYGWRGSLCDQC
VTFPGCAHGSCTEPWKCVCDVNWGGLLCDKDLNFCGTHTPCKNGGTCTNTEPNEYQCECP
EGFRGRNCDIAEHACLSSPCMNGATCVEDLAGFSCVCAEGWTGHTCSEVVKHCDRSPCGR
GATCQDVPEGFRCLCPPGWTGRTCQLDTNECEKSICVHARSCRNLIGGYLCDCLPGWTGP
NCDIRNSSCQGLCLNGGHCEDQVSGSNCLCPPGFLGKFCQKGPSPCDSTPCLNGGLCQDK
DGQTTTCSCAVGYSGNFCEIALDLCNPNPCQQGLECHSVEGRFMCACPDGYHGRECVSLR
STCKGQHCESAVSDTTNGSLSFYMILVGVLALVTVCGCAACAFVFSHLHRMRKKQQEEVP
QEEGINNQRELVNLIRNVDRPVPLLPPTAPLTQPPPPTPCYEEIELTLPPSPALSNPSPA
LKPAHAAKLDISNREREKLNRFNQADNQELEV
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgaataggtcaagagcgcacgcgggaactagtgtccgtgaaaggagcgggcgtaaaagg
agcatctggaaacaagagatgaggactgagcgactccagggacaactccagctgaagcgg
actatgatttttctcgccgcactcaccatgcaaccacaggtggtgtgtggtggagggctg
tttgagcttcagatccgccacttccagaatccccatgggctgctgcagaatggagaatgc
tgtgatctgcagaccagtgggggacagcgctgctcttctagggaccaatgtgacaccttc
ttccgagcgtgcctcaaggagtatcaagctcgggtcgcctccactggggcctgcactttt
ggtgtgggatattcaggcatcctgggtggaaactcccactcgtcacatcacctgagacac
agtgaaggaggaggagaaggagaagacggaactaatggacacattgtcattcccttctct
tatgcctggccaaagtccttctctctggtcctggaagctctggattatgacaacgacaca
ttagaaacaggtcagttgattgagcgggtccttctgtcctccatgttgaaccccggcgaa
cagtggcagccgtatcgacaccacggacagagtctcagtgtggagtactggcttcgattc
agatgtgactccaattactttggacctttctgcaacaagttgtgccgggctcgtgatgac
ttcttcggccactttagctgcgaccccagtggcacaaaggtctgcatggagggctggaca
ggaccagagtgcaaagaagcagtgtgtcggcaggggtgtcatcagacccacggctattgt
actgtccccggagaatgcaagtgtaactatggctggagggggtccctgtgtgaccagtgt
gtgacttttcctggctgcgcacatgggagttgcacagagccttggaagtgtgtgtgtgac
gtcaactggggaggacttctgtgtgacaaagatctgaacttttgcggcacccacacacct
tgtaagaacggaggcacctgcacaaacacagaacctaacgagtatcagtgcgagtgcccg
gagggttttcgaggacgcaactgtgacattgccgaacatgcatgtttgtcatctccatgt
atgaatggggccacctgtgtggaagacctggcaggcttcagctgcgtctgcgctgaaggc
tggacaggacacacctgctcagaagtggtgaagcattgcgatcgcagtccctgcggacgt
ggagcaacgtgtcaggatgttcctgagggtttccgttgtctgtgtccacctggatggact
ggcaggacatgccagttagacaccaatgaatgtgaaaaaagcatttgcgtccacgcccgg
tcatgccgaaacctgatcggtggatacctgtgtgactgccttcctgggtggacggggcct
aattgtgacatcaggaacagcagctgtcaaggtttgtgcctgaatggaggacactgtgag
gaccaagtatctgggtcaaactgcttgtgtccacctggtttcttggggaaattttgccaa
aaaggcccaagtccatgtgacagcaccccttgcctgaatggaggattgtgtcaggataag
gatggacagactactacctgcagttgtgctgtgggatattcaggaaacttctgcgagatt
gccttggatctttgcaatcccaatccctgccaacagggactggaatgccacagtgtagag
ggcaggttcatgtgtgcatgtcctgatggctaccatggtagggagtgtgtgagcctcaga
agtacttgcaaggggcagcactgtgaaagtgctgtgtctgacacaaccaatgggagcctc
agcttctacatgatcctggttggagtcctagctctggtgactgtgtgtggctgtgccgct
tgtgctttcgtcttctcacacctccatcgtatgcggaaaaaacagcaagaggaagtccca
caagaagagggcatcaacaaccagagggagctcgtcaacctaatacgaaacgtagaccgt
cctgttcccctgctgcctcccacagctcctctcactcaacctccgcctcccaccccttgc
tatgaagagattgaattgacattgcccccctccccagctctatcaaacccatcacccgca
ctaaagccagcccatgctgccaaactggacatttcaaaccgagaaagggagaagttgaac
cgtttcaaccaagcagacaatcaggagctggaggtctga
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