Oryzias latipes (Japanese medaka): 101160936
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Entry
101160936 CDS
T02443
Symbol
cthrc1
Name
(RefSeq) collagen triple helix repeat-containing protein 1
KO
K25700
collagen triple helix repeat-containing protein 1
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ola03037
]
101160936 (cthrc1)
Cilium and associated proteins [BR:
ola03037
]
Other cilia and associated proteins
Stereociliary proteins
101160936 (cthrc1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CTHRC1_C
Collagen
Motif
Other DBs
NCBI-GeneID:
101160936
NCBI-ProteinID:
XP_004077652
UniProt:
H2LAI0
A0A3P9I5D7
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All DBs
Position
16:5130792..5137335
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AA seq
229 aa
AA seq
DB search
MTPLSPRLLILLCLALPLHGQEKGRSRGYRKDPDADKFGSCLQGPAGTPGRDGNPGANGI
PGTPGIPGRDGLKGEKGECVSEVFEEPWKPNYKQCAWNSLNYGIDLGKIADCTFTKLRSE
SALRVLFTGSLRLKCKEACCQRWYFTFDGAECTGPLPVESIIYLNQGSPELNSTINIHRT
SSVEGLCEGIKAGLVDVALWVGTCADYPRGDASTGWNSVSRIIIEELPK
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgacgcctctctccccccgtctgctcattctgctctgtctggctcttcctctgcacggc
caggagaagggaagaagcaggggataccgaaaagatccggacgctgacaagtttggcagc
tgtctgcagggtccagcaggcacccctggcagagatgggaaccctggagccaacggcatt
ccagggacccccggcatcccaggtcgagacgggctcaaaggggaaaaaggagagtgtgtg
agtgaagtgttcgaggagccctggaaacccaactacaaacaatgtgcctggaactctctg
aattatgggatcgacttggggaaaatagctgactgtacgttcacgaagctgcgttcagag
agtgccctcagagtgctgttcactggctccttgagactcaagtgcaaggaggcctgctgt
cagaggtggtatttcacctttgatggagcggagtgcacgggacccctgccagtggagtcc
atcatttacttaaaccagggaagccctgagctcaactcaaccatcaacatccacagaacg
tcctcagttgagggactgtgtgagggcatcaaagcaggactggtggatgtggcgctgtgg
gtggggacctgcgccgactatcccaggggcgacgcgtctactgggtggaattctgtgtcc
aggattatcatcgaagaactgcctaaataa
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