KEGG   Oryzias latipes (Japanese medaka): 101160950
Entry
101160950         CDS       T02443                                 
Symbol
stxbp5
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
  KO
K08518  syntaxin-binding protein 5
Organism
ola  Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:ola00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ola04131]
    101160950 (stxbp5)
Membrane trafficking [BR:ola04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    101160950 (stxbp5)
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Tomosyn
    101160950 (stxbp5)
SSDB
Motif
Pfam: LLGL WD40_CDC20-Fz WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_IFT140_1st Beta-prop_RIG_2nd WD40_Prp19 Beta-prop_HPS5 ANAPC4_WD40 WD40 Beta-prop_TEP1_2nd Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Lgl_C EIF3I Beta-prop_Vps41 Beta-prop_EML Beta-prop_NUP159_NUP214 PEP5_VPS11_N Synaptobrevin CFAP43_N VPS8_N Beta-prop_VPS8 WD40_like
Other DBs
NCBI-GeneID: 101160950
NCBI-ProteinID: XP_011489932
UniProt: A0A3B3IC63
LinkDB
Position
24:complement(8424933..8532546)
AA seq 1138 aa
MKKFNIRKVLDGLKEVSSSTPSVQVGPQENHLFHETLQSDHFQLCKTVRHGFPYQPSSMA
FDPVQKILAIGTQSGALRLFGRPGVECYCQHESGSAVIQLQFLINEGALVSALADDSVHL
WNLRQKRPAILHSLKFNRERITFCHLPFQSKWLYIGTERGNVHIVNVESFMLSGYVIMWN
KAIELSSKAHPGPVVHISDNPMDEGKLIIGFESGIVVLWDLKSKKADYRYAHDEAIHSVA
WHHEGKQFICSHSDGTLTTWNVRGQGRPIQTITPHGKQPKDGKKPEPCKPILKVEYKTTR
NGEPFIIFSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDFQEPYA
VVVLLEKDLVVIDLAQNGYPIFENPYPLTIHESPVTCCEYFADCPVDLIPALYSVGSRQK
RQGYSKKEWPVSGGNWGQGTLSYPEIIITGHADGTVKFWDASAIMLQVLYKLKTAKVFDR
NRSKEDKGSTEVSDEDPFAIQIMAWCPESRMLCVAGVSANVIVYRFSKLEVTTEVVQLLE
VRMQSELNETDSPDGGGEPTSAHHTPGASPHTSGPPSQPSTSSNNSDGGNMPCLKVRSTP
LKQSAGYQVDLVVQLVWVSGEPPQQISSLALNSTYGLVVFGNSNGVAVVDYIQKTVVLNL
GTVELYGSNDPYQRQPRSPRKSRQPSGGLCDINEGSATSEDRCKSPTSVLMSNTNLHQFY
NGGGRGAKMSRKLSLPTELKPDLVLLSVCPPRGANPLDHRDNSFSRSRSSSVTSIDKESR
EAISLFYFCETFARKGDSTLTPCLYVGTSLGTVLVLVLTLPPAGEQRQLQPVIIAPVGML
VRLKGSVLRMALLDSSGSLLPPSFDPWFEPNVTTDGEEKVPKRRPVSVSPSTSQDLSESQ
YAVVCSEKQAKVVSLPSQTCIYKHNITETSFILRADVVQMTQGVCLACFCANGHIKTLSL
PGLRPLLDVNYLPLTDMRIARTFCFTNLGQAMYLCSPTEIQRITYSQETCENLQEMLGEL
FTPVETPEAPNRGFFKGLFGGGAQSLDREELFGEIAAGKASRSLAQHIPGTGGIEGMKGA
ASGVVGDLARARIALDERGQKLGELDERTAAMMTSADSFSKHAHEMMLKCKDKKWYQF
NT seq 3417 nt   +upstreamnt  +downstreamnt
atgaagaagtttaacatcaggaaggtgctggacgggctcaaggaggtgtcgtcttccacg
ccgtctgtccaagtggggccacaggagaaccatctgttccacgagactctccagtccgac
catttccagctctgcaagaccgtccgtcatggcttcccctaccagccttcatccatggct
ttcgaccctgtgcagaagattctggccatcggcacccagagcggagctctcagactgttt
gggcgtcctggtgtggagtgttactgtcagcatgagagcggctccgccgtcattcaacta
cagtttctcatcaatgagggggcgctggtgagcgcgctggctgacgacagcgtccacctg
tggaacctgaggcagaagagaccggctatcctccactccctgaagttcaacagagagaga
ataactttctgccacctgcccttccagagtaaatggctgtacatcggcacagaacgaggg
aacgtccacattgtcaacgtggagtccttcatgctctcaggctacgtcatcatgtggaac
aaagccattgaactgtcttcaaaagctcatcctggaccagtagtccacataagtgataac
cctatggatgagggaaagcttataattggattcgagtctggtatcgtggtcctttgggat
ctgaaatcaaagaaggcagactatcgctacgctcacgatgaggcgatccactcagttgct
tggcatcatgagggcaagcaattcatctgcagccactctgatggaaccctgaccacatgg
aacgtgagaggccaaggcaggcccatacagacaatcaccccgcatggaaaacagcccaag
gatgggaagaagccagagccatgtaaacccattcttaaagtggaatataaaacaactagg
aatggggagcccttcataatcttttctggtggtctgtcctatgatactgttggccgacgg
ccttgtctgacagtaatgcacgggaagagcactgcggtcctagagatggactaccctata
gtagacttcctcacactatgtgagacgccgtatcctaatgattttcaggagccttacgct
gtggtggtccttctagaaaaagatttagtggtgatcgaccttgcacaaaatgggtacccc
atatttgagaacccatacccgctgacgatccacgagtctcctgtgacctgctgcgagtac
tttgccgactgccctgtggacctcatacctgcactttactctgtcggctcacgacagaaa
cgacagggatacagcaaaaaggaatggcctgtgagtggtggaaactggggtcaaggcaca
ctaagttacccagagatcatcataaccgggcatgctgatggaactgtgaagttctgggat
gcctctgcaataatgctccaggtgctctataagctaaaaacagctaaggtatttgacagg
aaccggtccaaagaagacaagggcagcaccgaggtgtcagacgaggacccttttgccatt
cagattatggcttggtgtcctgagagccggatgctttgtgtcgccggggtgtcagctaac
gttatcgtctaccgcttcagcaagctggaagtaaccactgaggttgtgcagctactagag
gtgcgaatgcagtctgagctgaacgaaacagactctccagatggcgggggtgagccgaca
tcagcacatcatacccccggtgccagccctcacacaagcggcccgccttcacagccttcc
accagcagcaacaactctgatggaggcaacatgccctgcctcaaagtgcgcagcactcct
ttaaagcagtctgcaggttaccaggtagatttggtggtccagttagtgtgggtgagtgga
gagcctcctcagcagatctcaagtctggcactcaattccacctacggcctagtggtgttt
ggcaacagcaacggtgtagcagtcgtggactacatccaaaagacggtggtccttaatttg
ggaacggtcgagctttacggctccaatgacccctaccagagacagccacggtcaccgaga
aagtcacgacagccttcaggaggtctgtgcgatataaacgagggctctgccacttcagag
gaccgctgcaagtctcctacttcagtgttgatgtcaaacaccaatctacatcagttctac
aatggaggtggtagaggagcaaagatgtcacggaaattaagcttgcctactgagctaaag
ccagacttggtcctcctgtccgtatgcccgccgcggggtgccaacccattagaccaccga
gacaactccttcagccgctcgcgctcctccagcgtcaccagcatcgacaaggaatcgcgg
gaggccatcagccttttctacttctgcgagacatttgcccggaagggggactccactttg
accccctgtctgtatgtggggacctccctgggaactgttctggtcctggtgctcacatta
ccacctgctggggagcagcggcaactgcaaccagttatcattgcacctgtaggaatgttg
gtgcgactgaagggaagtgttttacggatggctctcttggattcctctggctctctgctg
cctccttcctttgatccttggtttgaacccaacgtcaccacagacggagaggaaaaggtc
cccaagcgccggcctgtgtccgtgtccccctccacctcccaggaccttagtgagagccag
tatgccgtggtttgctcagaaaaacaggccaaagtcgtttccctgccctcccagacgtgc
atctacaaacacaacatcacagagacatccttcatcttacgggcagatgtggtgcagatg
acccaaggcgtgtgcctggcctgtttttgtgccaacggccacatcaagaccctcagtttg
ccgggactgagaccgctcctggatgtaaactacctaccgttgacagatatgcggatagcc
agaacattctgcttcaccaacctgggtcaggctatgtacctgtgttccccaactgagatc
cagaggatcacctacagtcaggaaacctgtgaaaacctgcaggagatgctgggtgagctt
tttaccccggtggagacaccagaggcaccaaatagaggtttcttcaaaggcctctttgga
ggaggagcacagtcgctagacagagaggaactttttggtgaaatagcagctggaaaggca
tcacgaagtctggcccagcacatccctggcacgggtggtattgagggcatgaagggggct
gcctcaggtgtggttggagacctggcacgggcccggatagcactggatgaaagaggccag
aaactgggcgaactggatgagaggacggctgccatgatgacaagcgcagactctttttcc
aaacacgcccacgagatgatgctgaagtgcaaagataaaaagtggtaccagttctga

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