Oryzias latipes (Japanese medaka): 101160971
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Entry
101160971 CDS
T02443
Symbol
fip1l1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X3
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101160971 (fip1l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101160971 (fip1l1)
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
101160971 (fip1l1)
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Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
101160971
NCBI-ProteinID:
XP_011471498
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All DBs
Position
4:complement(758806..789239)
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AA seq
402 aa
AA seq
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MSSSADSTEAFDEDEEGKLYQLIYELKEEKGETERTPMPPSPKHSRVHLEIHAERRTNIA
EAPKLCPLKKVQGIKKSVQTKESLQKKPWNEPNANVSDYFNYGFTEETWKAYCKKQTKLQ
AFKRSQKIKNTAQRTCGGVKAGASVPAENFFSGKPSPAASRKSKASAGVTKGFAGSRSRG
KSSPCYQANKAQDVIDSSHKENIFPVLDQRRKAKTSILFPFVPPRSFLFQPRSASGYGSS
FCMSALSRQADGSDMSFKPLFHCSLGNNMLSSGLTETTKAWNRHIRQRKHHRDRDGSREH
DLDKESMRERNREKQTSSSRHRRSSTTHSHKYSRVKEQTKARSSKDESHRCCSFKDIMGE
NRRKDRSWKPDRVSHSSTQGSCSRKFEDRTMVKDAKRRKNKT
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcatcagccgactccacggaggcgtttgacgaggacgaggagggaaaactctac
caacttatttatgagctcaaagaggagaaaggtgagacagaaaggactccgatgcctccc
agcccaaaacattcacgtgtgcatcttgagattcatgctgaaaggaggacaaacatagct
gaggctccaaaactgtgtccattaaagaaagtccaaggcatcaaaaaaagtgtccagacc
aaagagtcgttacagaaaaagccctggaatgaacccaatgcaaatgtttctgattatttt
aactatggttttactgaagaaacttggaaagcctactgtaagaaacagactaaactacaa
gcatttaaacgaagccaaaagatcaaaaatacggctcagagaacttgtggtggagtcaaa
gcaggagcgtctgttcctgctgagaatttcttctcaggaaaaccatctcctgcagcttcc
agaaagtcaaaggcaagtgctggcgtgactaaaggattcgctgggtccaggagcagaggg
aaaagcagtccatgttatcaagccaacaaagcccaggatgtcattgactcctcccataaa
gagaacatcttccctgttttggatcagcgccgtaaagccaaaaccagcattctctttcca
tttgtccctccacgatcctttcttttccaaccaagatcagcatcaggatatggatcttcc
ttctgtatgtctgctctgagcagacaagctgatggctcggatatgtccttcaaaccactt
ttccattgttccttagggaataacatgctgagttcaggattgactgaaactaccaaggcc
tggaaccgccacataaggcaaagaaagcaccacagagacagagatggatccagagaacat
gaccttgacaaagaaagcatgagagagagaaacagagaaaagcagacgtcctcctcacgc
cacaggaggtcttccacgacacattctcataaatattcacgagtgaaggagcaaacaaag
gccaggagctccaaggatgagagccacagatgctgcagcttcaaagacatcatgggagaa
aacagaaggaaagacagaagctggaagcctgacagagtttcacacagcagcactcaggga
agctgcagcaggaaatttgaagataggaccatggtaaaagatgcaaaaagaagaaaaaac
aagacgtaa
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