Oryzias latipes (Japanese medaka): 101160986
Help
Entry
101160986 CDS
T02443
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ola03041
]
101160986 (tfip11)
Spliceosome [BR:
ola03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
101160986 (tfip11)
Other components
Complex C specific factors
101160986 (tfip11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Arteri_nsp7a
Motif
Other DBs
NCBI-GeneID:
101160986
NCBI-ProteinID:
XP_023814278
LinkDB
All DBs
Position
9:13550027..13554778
Genome browser
AA seq
832 aa
AA seq
DB search
MSMSHLYGRREEEEEGVEIESFEVTDWDLANEFNPERRRFRQTKEQATYGIWADKDSDED
ERPSFGGKRSKDYSTPVNFVSAGLRKTAAEEKQQDKEEGSDDSEEDAPAVPPPTRGIAPR
KLQMSNFRGNQSQRFAGGIQSGQGIGTWEKHTKGIGQKLLQKMGYQPGKGLGKNAQGIVN
PIEAKVRKGKGAVGAYGNERTQQSLQDFPVVDSEEEEEKEFQKELGQWRKDPAGSAVKKK
PKYSYRTADELRAKGKMVSRNMAASAGELAQVKVIDMTVREPKVYYSYSQIANKHSVPDE
TPPAMSTRDQKGSGFALPELEHNLQLLIDLTEQDILQSARRLQHEKDVVVSLSHESRALQ
SRLEAEQDAIQKMEAVLALVERFPSGETPPGEGPTLQECAQIFETLQTDYYEEYKMMGLA
DLAVAVVHPLLKEKLHSWEPLKDSAYCLEDIGQWRAILESRDLRSSGPDSNMDPYHRLLW
EVWIPVMRMCVSGWQPRMVGPMVDCVTLWAPLLPQWILDHLLEQLILPRLQREVDNWNPL
TDTVPIHSWIHPWLPLLQSRLEPLYPPIRSKLANALQRWHPSDASARLILQPWKNVFTAG
AWEAFMVKNIIPKLALCLEELVINPHQQQMEPFHWVMDWEGMLSPSSLVSLFDKNFFPKW
LQVLCSWLSNSPNYEEITKWYLGWKGLFSDILLTQPLIKEKFNEALDIMNRAVSSGMGGY
MQPGARENIAYLTQTERRKDFQYEALQERRDAESVAQRGIGSGVPTNFKDLIQAKAEENN
IVFMPIVAKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcccatctttacgggcggagggaagaagaggaagaaggtgtggagatcgaa
agcttcgaggtgacagactgggatctggccaatgagtttaacccagaacgccgcaggttt
aggcagaccaaggagcaggccacttatgggatctgggctgacaaagattcagatgaagat
gagagacccagctttggtggcaagaggtcgaaagattacagcaccccagtgaattttgtt
agtgccggtctacgtaaaactgcagccgaggagaaacagcaagacaaagaagaaggttct
gatgattcggaagaggatgcccctgcagttccccctcctactcgtggaattgcacctaga
aaacttcagatgagtaattttcgtgggaatcagtcccagaggtttgctggtggaatacaa
tctggacagggtattggaacctgggagaagcacacaaaaggaattggacagaagcttctg
cagaaaatgggttaccagcctggaaaggggcttggaaaaaatgctcaaggtattgtaaac
cctattgaggcaaaggtccgtaaaggtaaaggagctgtaggtgcatatggcaatgagaga
acccagcagagtctgcaggacttccctgtggttgactctgaagaagaggaggaaaaggag
tttcaaaaagaattgggtcagtggcgaaaggatcctgcgggctccgcagtcaagaagaaa
ccaaaatactcatacagaactgcagatgagctgagggctaaaggcaaaatggtttctcgg
aacatggcagcatctgcaggagagttggcgcaggttaaggttatagatatgactgtaaga
gagccaaaggtttactacagttacagtcagatagccaacaaacacagtgttcccgatgaa
accccaccagccatgtccacacgggatcagaagggttccggcttcgctctccctgagctt
gagcataatcttcagctgctgatcgacctcacagaacaggacattttacagtcggccaga
cgtctacagcatgaaaaggacgtggtcgtttctctgagtcatgagtcccgtgcgttgcag
agcagactagaagcagagcaagatgccatccagaaaatggaggctgttttggcactggtg
gagcgttttccctctggagagacgccaccaggggagggaccgactcttcaggagtgtgcc
cagatctttgagactttacaaacagattattatgaagagtataaaatgatgggattggca
gacctggctgtggcagttgttcatcctttacttaaggagaaacttcactcatgggagcct
ctaaaggacagtgcatactgtctggaagacattggtcagtggagagcaatccttgaatcc
agggatcttcgttccagtggcccagactccaacatggatccttaccacagacttttatgg
gaagtgtggatccctgtgatgcgtatgtgtgtgtccgggtggcagccccgtatggttgga
ccgatggtggactgtgtgacgttgtgggctcctcttctgcctcagtggatcctggatcac
ctactggaacagctgatcttaccccgcctgcagcgcgaggtagataactggaatccttta
actgacacggtgcccatccactcctggattcacccttggcttcctctactccagtcgcgc
ctggagcctctctacccacctatcaggagcaaacttgccaacgctctgcagcgctggcat
ccgagtgatgcctcagcgcgcctcattcttcagccatggaagaacgtttttacagcaggt
gcatgggaggccttcatggtgaaaaacatcatccctaaactagctttatgtctggaagag
ctggtcatcaacccgcaccagcagcagatggagccgtttcactgggtgatggactgggag
ggaatgttgtctccctccagtcttgtgtccctttttgacaagaactttttcccaaaatgg
ttacaggttttgtgttcatggctgagcaatagtcctaactacgaggaaatcacaaagtgg
tatctcggctggaaaggcttgtttagtgacattctgttgactcaacctctcattaaagag
aaatttaatgaggctttggacatcatgaaccgtgcagtgtcatcaggaatgggtggatat
atgcagcctggtgcaagagagaacattgcctatctcacacagacggagagacggaaagac
ttccagtatgaagccttgcaagagcgccgggatgcagaaagtgttgctcaaagaggcatc
ggttctggtgtgccaactaactttaaggatctaattcaggccaaagcagaggaaaacaac
attgttttcatgcccatagtggccaaacggcacgaggggaaacagctctacacatttggc
cgcattgttatttacatagacagaggtgttgtgtttgtgcagggggaaaagacttgggtg
ccaacatctttgcaaagtctgatagatatggcaaaataa
DBGET
integrated database retrieval system
