Oryzias latipes (Japanese medaka): 101161166
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Entry
101161166 CDS
T02443
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04080
Neuroactive ligand-receptor interaction
ola04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
101161166
04082 Neuroactive ligand signaling
101161166
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ola04040
]
101161166
Ion channels [BR:
ola04040
]
Ligand-gated channels
GABA-A
101161166
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
101161166
NCBI-ProteinID:
XP_004073540
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All DBs
Position
10:complement(17575441..17582262)
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AA seq
444 aa
AA seq
DB search
MAGASLSLVVFICWISLGNVWGEEKVFSDNITRILDRLLDGYDNRLRPGSGGGITEVKTD
IFVTSFGPVSDVKMEYTMDMFFRQMWVDERLKFEGPTEILRLNNRMVDKIWTPDTFFRNS
KKSISHNMTTPNKLFRIMQNGTVLYTMRLTISAECPMRLMDFPMDGHACPLRFGSYAYTS
SEIIFTWRKGLTASVECPKESMSLLQYDLVGQTLSSEMIKLNTGQYSVQVVYFHLQRKLG
YYLIQTYIPLIMVVVLSQVSFWINKESVPARTVAGITTVLTMTTLSISARQSLPKVSYAT
AMDWFIAVCFAFVASALVEFAAVNYFATLQANRLMKDRARQDRLEVLATGSEDDDTISSD
SSFQEGLKRRNHSVSCSEPGEIPPTPIFLQQGSAFPQIPQLAGTSRIDSYARILFPLTFA
LFNLVYWYIYLAKDTMERARDMDP
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggccggtgcctcattatctctggttgtttttatctgctggattagtctaggtaatgtc
tggggtgaagaaaaagtattttcagacaacattactcgtattttggatagactgctggat
gggtacgacaacaggttacgacctggctctggaggtggcatcacagaggtgaaaacagac
atttttgtcaccagctttggacctgtttcagacgtgaagatggagtacaccatggacatg
ttcttccgtcagatgtgggttgacgagcgtctgaaattcgaaggccccaccgaaatccta
cgtttgaataatcgcatggtggacaaaatctggacacctgacacgtttttcagaaactcc
aagaagtccatttcccacaacatgaccacgcccaacaagctcttccgtatcatgcagaac
gggactgtcctctacaccatgagactgacaatcagcgcagagtgtccgatgaggctgatg
gatttccccatggacggtcacgcctgtcctctccggtttggaagctatgcatacaccagc
agtgaaatcattttcacctggaggaaaggcctgacagcttctgtcgaatgtcccaaagag
tccatgagtcttctgcagtacgaccttgtggggcagactttgtccagtgaaatgatcaag
ttaaacacagggcagtactctgtgcaggtggtctatttccacctccagaggaagctgggc
tactacctcatccagacctacattcctttaataatggtggttgtcctgtcacaagtctcc
ttttggatcaacaaagagtccgttcctgcgcgcacagttgctggcatcaccacggtgttg
accatgaccactctgagcatcagcgctcgccagtccttacccaaagtctcctatgccacg
gccatggactggttcatcgccgtgtgctttgcctttgttgcgtcggctctggtggagttt
gcagcggtgaactacttcgccaccttgcaggccaaccgtctgatgaaggacagagccaga
caagacaggctggaggttctcgccactgggagtgaggatgatgacacgatttcatcggac
agcagctttcaggaaggcctgaagaggagaaaccattcagtgagctgcagtgagccggga
gaaatcccgccaactccgattttccttcaacagggttcagcttttcctcagataccgcag
ctggccgggaccagccgcattgactcatatgctcgcatcctcttccctttgacctttgcc
ctcttcaacctggtctattggtatatttatctggccaaagacaccatggagagagccagg
gacatggatccttaa
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