Oryzias latipes (Japanese medaka): 101161196
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Entry
101161196 CDS
T02443
Symbol
tfap2a
Name
(RefSeq) transcription factor AP-2-alpha isoform X2
KO
K09176
transcription factor AP-2 alpha/beta
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
101161196 (tfap2a)
Transcription factors [BR:
ola03000
]
Eukaryotic type
Other basic domains
AP-2 (bHSH)
101161196 (tfap2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TF_AP-2
DUF2624
Motif
Other DBs
NCBI-GeneID:
101161196
NCBI-ProteinID:
XP_004081017
UniProt:
A0A3P9LRA6
H2LQI6
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All DBs
Position
20:complement(13118331..13128785)
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AA seq
423 aa
AA seq
DB search
MLVHSFSAMDRHDGTSNGTARLPQLGGVGQSPYTSAPPLSHTPNSDFQPPYFPPPYQPIY
PQSQDPYSHVNDPYSLNSLHAQPQSQHPGWPGQRQGQESGLLHQHRSLPHQLCREYRREV
LLPSGHGIDTGLSDSIQIHGIPHPLDDVQPEDQGIHIPDQTVIKKGPVSLSKNNSVSAIP
VNKDGLFGGVVNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLR
RAKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPA
KAVAEYVNRQHSDPNEQVQRKNMLLATKQVCKEFTDLLSQDRSPLGNSRPQPILEPGIQS
CLTHFSLISHGFGTPALCAAVTALQNYLTEAIKAMDKMYLNNNPNSHSDNGTKGGDKDEK
HRK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgttagtgcacagtttttccgcgatggaccgtcacgacggcaccagcaatgggacagcc
aggctacctcagctgggcggcgtgggccagagtccgtacacgagcgcccctccactctcc
cacacgccgaactcagacttccagcccccgtacttcccaccgccctaccagcccatctac
ccgcagtctcaggacccgtactcgcacgtcaacgacccttactccctgaactccctgcac
gcccagccgcagtcgcagcacccgggctggccggggcagaggcagggccaggagagcggc
ctgctgcaccagcaccgcagcctgccacaccagttgtgccgggagtaccgcagggaagtg
cttctaccgtccggccacggcatcgatacaggactgtcggactctatccaaatccatgga
atacctcaccctttagatgacgttcagcctgaggatcaaggaattcacattccagaccag
actgtaattaaaaaaggtccagtgtctttatccaagaacaacagcgtctccgccatcccc
gtaaataaggatggtcttttcggaggagtggttaacccaaacgaggtgttctgttcggtt
ccgggtcgcctgtctctcctcagctccacatcaaaatacaaggtcacggtggctgaggtg
cagagacgcctttcgccgccggaatgcctcaacgcctcactgctgggcggggtgctgagg
agggccaaatccaagaacggaggaagatccttaagagagaagctggataaaatcggcttg
aatttacctgcaggcagacgcaaggcggccaacgtcaccttactgacgtcactagtcgag
ggagaagcggtgcaccttgccagggatttcggttatgtatgcgagaccgagtttccagcc
aaggcagtagccgaatatgtaaaccgtcagcattctgacccaaacgagcaagtccaaaga
aaaaacatgctattggccacaaaacaagtgtgcaaagagttcacagacctgctgtcccag
gatcgctcgccgctgggaaactcacggccacagcccattcttgaaccgggaatccaaagc
tgcttgacccacttcagtctaatctcgcacggttttgggacccctgcactgtgcgcggcc
gtcacggcccttcagaactatctaaccgaggcgatcaaagccatggacaaaatgtacctc
aacaacaaccccaatagtcactcagataacggcactaaaggtggagacaaagacgagaag
cacagaaagtga
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