Oryzias latipes (Japanese medaka): 101161237
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Entry
101161237 CDS
T02443
Symbol
fan1
Name
(RefSeq) fanconi-associated nuclease 1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
101161237 (fan1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ola03400
]
101161237 (fan1)
Enzymes [BR:
ola01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
101161237 (fan1)
DNA repair and recombination proteins [BR:
ola03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
101161237 (fan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAN1_TPR
VRR_NUC
Fan1_SAP
FAN1_HTH
SAP
BsuBI_PstI_RE
Motif
Other DBs
NCBI-GeneID:
101161237
NCBI-ProteinID:
XP_004069998
UniProt:
A0A3B3HSW7
LinkDB
All DBs
Position
6:15238637..15245670
Genome browser
AA seq
971 aa
AA seq
DB search
MTDNRAGEAGERRSKTRLSLSKSKKKGGVKAGTPTKATITSFFVSQPPPKLACPLCGKMV
HRFKMNEHIDLECQNFQSGDSIGFTSGSSSAQLSSQRNSDRAVDQKGEETNTSPYFKKGE
EGHQEAREIKSKTVVRTIDLGSLSSKLSKHCNKTPEKTHTEDKNTLQEVYSSETLCGSQK
ENALINESNNKKDLFTMSSDTRTPENNPSSSKGPFSKSQPLKTDSSQTLVTPNSKQAKRK
KEETLSVRLSSYKKKVKYEGQSEEPNTKSCDVTTKTTDMKEQEAEWSSVASEEKNIEGTS
VPETAAAAAAAAADQSSDAPPLPYYLRNFQTVLHAVLENEDDRELFNQDDMMIINTFNKL
SVAGQKLYVRLFQRKLKWLQVNKLEYAEISSDLGPIAQELAQSGFLQTEYDLEDLEEALD
LLPAPELKTLAKTFHLASSGTQKQQLVDGLLRLSKQKSFFSLASSQNKVGDVILKRSKKL
AGSCVRLSRGPRAVFSRVLLLFSLTEAMDEEEMAAGGQNQLFTILLVNTGRLAFPDYTVH
RVAKVFQDREDLIRYESAMRSLLEMTGVMQGGQWEVALELYTAAKRNWEVLRKNQDFRHH
EELPVFLRSFTTGWAYTRILSRGVEILQRLRRYEDAVEELQFLLQQTVYCVDSRGRWWDR
MALNLHQHLKKTKKAISAIKDGLSDPLVRTGHKLSLHQRAVRMKESASCKKYCLLLRDLP
TIQVQDVKHVTIRGQLFPHEGGMGKSRFLLPANEEGEENAHTTVICSVEELSLAHYRKQG
FDQGIHGEGSTFSTLFALLMWEIVFMEGITDVFRNPYQTCPLDLYTDCFYENRKNAITCR
VQLLREASVETLCSMLENVWTSQEGKVCSLVSWERFSSLQQAQSLVACFGGVFLSGIVER
MAKDYRHCRGGLPDLVVWNTSNNTYKLVEVKGPNDRLSQKQQIWLDELQKLGADVEVCHV
TATGARGDRLE
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgacagataatagagctggagaagcaggtgaacggcgatccaagacgaggctgtccctg
tccaaaagtaagaagaagggtggcgttaaagctgggaccccgaccaaagccaccatcaca
tcgttcttcgtcagtcagcctccacccaagctggcttgccccctgtgtgggaagatggta
catcggttcaaaatgaacgagcacattgacttggagtgccagaacttccagagcggagac
agcattggtttcacctcaggaagtagcagtgctcagctgtcctctcaaagaaactctgat
cgagctgtggaccaaaaaggagaagagacaaacactagcccttattttaagaagggtgaa
gaaggtcaccaggaagcacgagaaattaaaagcaagactgtggtgagaaccattgatttg
gggagtctatcttctaaattatccaaacattgcaacaagacaccggagaaaacacacaca
gaggataaaaacaccttacaagaggtttattcttctgaaacactttgtggctcccagaaa
gaaaatgctttgattaatgaatcaaacaacaagaaagacctttttactatgagttcagac
accaggacaccagagaacaatccatcatcttcaaaaggacccttttctaaatcccagcca
ctgaaaacagactccagtcaaacattagttacccctaactcaaaacaggctaaacgaaaa
aaagaagaaaccctcagtgtcagactgtctagttacaaaaagaaggttaaatatgaaggt
cagagtgaagaaccaaatacaaagtcttgtgatgttacaactaagacaacagacatgaag
gagcaggaagcagagtggtcctctgttgcttctgaagagaagaacattgaaggtacatca
gtaccagagacggctgctgctgctgctgctgctgctgcagaccagagctctgacgctcca
cctcttccctactacctgcgtaacttccagactgttctgcatgctgtgctggaaaacgag
gacgacagggaattattcaaccaggatgacatgatgattataaatacatttaataaactt
tcagttgctggtcagaagctttatgtgagactatttcagagaaaactcaaatggctccaa
gtaaataaattagaatatgcagagataagcagtgatctgggtcctattgcacaagaactg
gctcaaagtgggtttctacagactgaatatgatcttgaggatttggaggaggctctggat
cttctaccagctcctgaactcaaaactcttgctaaaactttccatttggccagttccggg
actcaaaaacagcagttagttgatggacttctgcggctaagcaagcagaagtcctttttc
tctttggcctcttctcaaaacaaagttggagatgtcatcttgaaaaggtcaaagaagctg
gcaggttcctgtgtgcgtctgtctcgtggtcctcgggccgtcttctctcgcgtccttttg
ctcttttctttgacggaggccatggatgaggaggagatggcagctggaggacagaaccag
ctttttaccatccttttagtcaatacaggacgcctcgccttcccagactacactgtgcac
cgagtagctaaagtgtttcaggatagagaggatcttatcagatatgaatcagccatgcga
tcccttctggagatgactggagttatgcaggggggtcagtgggaagtggctcttgagctt
tacactgcagccaaacgaaactgggaggtattgaggaaaaaccaagacttcaggcatcat
gaagaactgcctgtgttcctgcgcagtttcaccacaggatgggcctacactcgtatccta
tccaggggggtggagatattacagagactccgccgctatgaggatgcagtggaagaactg
cagtttttactacagcagactgtttactgcgtcgacagccgcggtcgatggtgggacaga
atggcgctcaatctgcaccagcacctcaaaaaaaccaaaaaagctatatcagctataaaa
gatgggctatcagaccccttagtgcgcacaggacataaactgtcccttcaccaaagagct
gttaggatgaaggagtcagccagttgcaagaaatactgcctgttactcagggacctgccc
actattcaagtccaagatgtcaagcacgtaactattagaggccagctgtttcctcatgag
ggtggaatggggaaatctaggtttcttttaccagcaaatgaagaaggcgaggaaaatgct
cacactactgtgatatgctcagtggaagagctgtctttggcacattatcgaaaacaaggg
tttgatcagggaatccacggggaaggctcaacattctccaccttgtttgctcttctcatg
tgggaaattgtttttatggagggtattacagatgtttttcgaaatccctatcagacatgt
cctctggatctttacactgactgcttctatgaaaacagaaagaacgccatcacctgccgt
gttcagttacttcgtgaagcttctgtggaaacactgtgtagcatgttggaaaatgtctgg
acttcccaggagggtaaagtgtgctcattggtcagctgggaacgcttctcatccctacag
caggcccagtctctggtggcatgctttggaggagttttcttgagtggcatagttgagcgt
atggcaaaagattacagacactgccgtggaggtttgcctgatcttgtggtttggaatact
tcaaacaacacatacaaactcgtggaggtaaagggacccaatgaccggctgtctcagaag
cagcagatctggctggatgagcttcagaaactgggagctgatgtggaggtgtgtcatgtg
acagctactggagccaggggggatcgcctggagtaa
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