KEGG   Oryzias latipes (Japanese medaka): 101161260
Entry
101161260         CDS       T02443                                 
Symbol
six2
Name
(RefSeq) homeobox protein SIX2
  KO
K19472  homeobox protein SIX2
Organism
ola  Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:ola00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ola03000]
    101161260 (six2)
Transcription factors [BR:ola03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain SINE
    101161260 (six2)
SSDB
Motif
Pfam: SIX1_SD Homeobox_KN Homeodomain HTH_3 YdaS_toxin HTH_72 Phage_mat-A
Other DBs
NCBI-GeneID: 101161260
NCBI-ProteinID: XP_004077098
UniProt: H2LHU6
LinkDB
Position
15:16137209..16140396
AA seq 290 aa
MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRSVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENNENSNSNSHNPLTSSMNGNKTLLGSSDDEKTPSGTPDHTSQSPALLLGSNT
GLQSLHGLAPPPGPSAIPVPGGADSMHHHHSLHHETILNPMSSNLVDLGS
NT seq 873 nt   +upstreamnt  +downstreamnt
atgtcaatgcttccgacctttggttttacgcaggaacaagtggcgtgtgtctgcgaagtc
ctccaacaagggggcaacatcgagcggctgggacgcttcctctggtcgctcccggcgtgc
gagcacctccacaaaaatgagagcgtcctcaaggcaaaagccgttgtcgcgttccaccgg
ggcaacttccgagagctgtacaagatcctggagagccaccagttttccccgcacaaccac
ccgaagctgcagcagctgtggctcaaagcgcactacatcgaggcggaaaagctaaggggc
cgcccgctgggcgcagttgggaagtaccgcgtccggagaaagttccctcttccccgctcc
atctgggacggagaggagaccagctactgcttcaaggaaaagagcaggagcgtccttcgc
gagtggtacacccacaacccctatccatccccacgggagaaaagagagctggccgaggcc
acgggactcacgaccacgcaggtcagcaactggttcaaaaaccgacggcagcgggatcga
gccgccgaggctaaggaaagagaaaacaacgaaaactccaacagcaacagtcacaaccca
ctgacttcttctatgaatggaaataaaactcttttggggagctcggatgacgaaaaaact
ccatctggaactccggatcacacatctcagagcccagctctgctcctgggctcaaacacc
ggtttacagtcactacacggcctcgctccaccgccgggacccagtgcaatccctgtgccc
ggcggtgcagactcgatgcaccatcaccactcattacaccacgaaaccatactgaaccct
atgtcttcaaatctagtggacctcggctcttaa

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