Oryzias latipes (Japanese medaka): 101161264
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Entry
101161264 CDS
T02443
Symbol
cnot3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101161264 (cnot3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101161264 (cnot3)
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101161264 (cnot3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
101161264 (cnot3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5646
Motif
Other DBs
NCBI-GeneID:
101161264
NCBI-ProteinID:
XP_023819587
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All DBs
Position
16:19352169..19362037
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AA seq
903 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWLASNEIKDKRQLVENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQRE
KEETGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIDELKRLIERHRFHI
RMLETILRMLDNDSVPVDAIQKIKDDVEYYIDSSQDPDFEENEFLYDDLDLEDIPAALVA
TSPSGQGNEDEMYLHSSSTPTSTTSSSPIPPSPATCTTENSEDDKKRGRSTDSEVSQSPV
KNGAPSLLSSFSSSTTSGSSSSSSLVSMASVVGGITTVPTSSSLIGSFSSAVQQHQHQLT
QQQQQSQSLSQSQQQQQQSQTKPSIPSNNTPSPPNNPLIPMSTAPSLPTPSTLSSSAPTS
QSTAGPTTTSSLGLGLGLDLRKGTSSANQMSSLGLGGHPTPLSTMAGLISGSTLAPYAQA
AASGGLGLSSTTQSSNSVESSTSISTSGSSGVTTNGAGTGLGLSCPSSSHNSMSGSILGL
VSGQGVTSGASQVPPSSASSTTGAVSMLGGNGGNVGVVGMNAAPARPPSGLKQNGSTSYS
AVVAESSTESALSTPSQSQNSQPSSLSSSTSQPMDNGPSLISSITLPPSSPSPSFSDGTP
GGGSLLNGPHSYTQASEGLKVSQASEPLSSLKAMAERAALGSGLEEIPNLHLTDRSRNDI
FSSSSAAPGTPSTPQSSVSEVSIPPSLGVCPLGPTPLPKDQLYQQAMQEAAWTHMPHPSD
SERIRQYLMRNPCPTLPYHHQVPPHHSDSIEFYQRLSTETLFFIFYYLEGTKAQYLSAKA
LKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDR
DLQ
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaaaagaaaacttcaaggtgagatcgatagatgtttaaaaaaagtagctgaa
ggtgtagaacagtttgaagatatttggcaaaagctccacaatgcagccaatgcaaaccag
aaggaaaaatatgaggcggacctcaaaaaagagataaaaaaactgcagcgattgagagat
caaataaaaacatggctggcctcaaatgagatcaaagacaaaaggcagctagttgagaat
cgcaaactcatagagacgcaaatggagcgattcaaagtggtggaacgtgaaacaaaaaca
aaagcctactctaaagaaggcttggggctcgctcagaaggtggatcctgcacagagggag
aaggaggaaactggacaatggctaacaaatacaatagacactcttaacatgcaggtggat
cagtttgaaagtgaggtggaatctctctcagttcaaacacgaaagaagaagggggataaa
gaaaagcaagatcgaattgatgaactaaagaggttgattgagagacacagatttcacatt
cgcatgttggagacaattttacgaatgctggacaatgactccgtgcctgtggatgcaatc
caaaaaatcaaggatgatgtggaatactacatagattcctcccaagatccagactttgaa
gaaaatgaattcttgtatgatgacttggacctggaagacatccccgcagcattagtcgca
acatctccttctggtcagggcaatgaagatgagatgtacctgcactctagcagcactccc
acctctaccacctcttcttcacccatcccgccatccccggctacttgcactactgagaac
tcggaagacgataagaaaaggggacggtcgacagacagtgaagttagtcagtcacctgtg
aagaacggcgccccatccttactatcatccttttcttcttcgacaacctctgggtcctct
tcatcttcctcccttgtgtccatggcgagtgtggttggaggcattaccacagttcccacg
agcagcagtctaataggcagcttcagcagtgcagtgcagcagcatcagcatcagttgaca
cagcagcagcaacaatctcaatccttaagccagtcacaacagcagcagcagcaatctcag
acaaaaccttctatcccttcaaacaacaccccaagcccgcccaacaacccccttatccca
atgtccactgcaccctctctaccaacacccagcacactcagctcatcagctcccacttct
cagtccacagccgggcctacaaccacatccagtttgggacttggactggggttggattta
agaaaagggaccagcagtgccaaccaaatgtcaagtttaggcttgggtggccatcctact
cctttaagcacgatggctggcttaatttctgggtccacacttgccccttatgctcaggca
gcagcatcagggggcttgggtctgagcagcaccactcagtccagtaattcagtggagagc
agcacttctatctccacttctggctccagtggagtcaccacaaatggggctgggacaggg
ctcggtctgtcgtgtcccagctcatcccataactctatgagtgggagtattctgggtcta
gtttccgggcagggtgtgacctctggtgcctctcaggtgcccccaagctctgccagctct
actactggagctgtgagcatgttgggaggaaatggaggaaacgttggagtagttggaatg
aacgccgctcctgctagaccaccaagtggactcaagcaaaatggaagcacaagttacagt
gctgttgtggccgagagctccacagaatcggctctaagcacacccagccagtcacaaaac
agccaaccctcatctctcagttcttcaaccagtcagcctatggacaatggtcccagctta
atcagctccataaccctgcctcccagctctccgtccccctcgttctcagatggtacacct
ggtggaggcagtctcctcaatgggcctcactcctatacacaggcctcagagggtctcaag
gtgagccaagcatctgagcctctcagttctctgaaagccatggctgagagggcagctctg
ggatcaggcctggaggagattcccaacctgcatctgacggacagaagtcggaacgatatt
ttctctagttcatctgcagctcctggtacaccctccacccctcagtcatctgtgtcagag
gtcagcattcccccgtcactaggggtctgtcctttgggtccaacccctctgccaaaagac
cagctctaccaacaggcgatgcaagaggctgcgtggacgcacatgccacacccctcagac
tctgaaaggatcaggcaataccttatgaggaatccatgccccactttgccataccaccat
caggtacctcctcatcactctgactccatagagttctaccagagactgtccacagaaact
ctcttcttcattttctattacttggagggaaccaaggctcagtatctgtctgccaaggct
ctgaagaagcagtcatggagatttcacacaaagtacatgatgtggttccagaggcacgag
gagcccaagactatcactgatgagtttgagcagggcacttacatttacttcgactatgaa
aaatggggccagaggaaaaaggaaggattcacctttgagtacaggtaccttgaagaccga
gacctgcagtga
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