Oryzias latipes (Japanese medaka): 101161318
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Entry
101161318 CDS
T02443
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03015
mRNA surveillance pathway
ola04261
Adrenergic signaling in cardiomyocytes
ola04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101161318
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
101161318
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
101161318
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ola01009
]
101161318
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101161318
03036 Chromosome and associated proteins [BR:
ola03036
]
101161318
Protein phosphatases and associated proteins [BR:
ola01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
101161318
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
101161318
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
101161318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
101161318
NCBI-ProteinID:
XP_020562361
UniProt:
A0A3B3HHE4
LinkDB
All DBs
Position
10:20519546..20555803
Genome browser
AA seq
544 aa
AA seq
DB search
MRVPVLHKQLGPSHRQGEVEKRTVSVGSPGRVARTLDCAACLLSGASDAVIIAPRAADTE
APSPPAPPRSISDWLWRRQCGCGAPNASLFTRLPAPEKMKCFSRYLPYLFRPPSTILSST
CHTEADIISTVEFNSTGELLATGDKGGRVVVFQREQESKTQPHRRGEYNVYSTFQSHEPE
FDYLKSLEIEEKINKIKWLPQQNAAYFLLSTNDKTVKLWKISERDKRPEGYNLKDEDGRI
RDPSTITSLRVPVLQPMDLMVEATARRIFSNAHTYHINSISVNSDLQTFISTDDLRVNLW
NLEITDRSFNIVDIKPANMEELTEVITSAEFHPQQCHTFAYSSSKGSIRLCDMRLAALCD
KHCKYFEEPEDPATRSFFSEIISSISDVKFSHNGRYLMTRDYLTVKVWDLQMENKPVETY
QVHDYLRGKLCSLYENDCIFDKFECVWNGSDSVIMTGSYNNFFRMFDRNTKRDVTLEASR
ENSKPRAILKPRKVCVGGKRRKDEISVDSLDFSKKILHTTWHPYENIIAVAATNNLYIFQ
DKVN
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgagagtccccgtcctgcataaacaactcggcccctcacatcgacagggcgaagtagag
aaacggaccgtttccgttggctccccggggcgggttgcacgaaccctggactgcgctgcc
tgcctcctgtcaggggcaagtgatgctgtcatcatagccccccgcgccgcggacacagag
gctccttcccctcccgcacctccccgtagcatctctgactggctgtggcgacggcagtgc
ggatgtggagccccaaacgcatcgctcttcacccgtcttccagcaccggagaagatgaaa
tgtttttctcgctatctgccgtacctcttccgccctccgagcaccatcctgtcctccact
tgccacaccgaagctgacattatctcaactgtggagtttaactcaacaggggagctcttg
gccaccggggataagggaggtagagtggttgtcttccagagggagcaggagagtaagaca
cagccccatcgacgaggggagtacaatgtttacagcacattccagagtcacgagcctgaa
tttgactacctgaagagcttggaaattgaagagaagatcaataaaattaaatggcttcca
cagcagaatgcagcatacttcctgctctccacgaacgacaagactgtgaagctgtggaag
atcagcgaaagggacaagcgtccggaaggctacaacctgaaggatgaggatggaagaatc
cgagacccatcaaccatcacctcactacgggtgccagtgctgcagccgatggatttgatg
gttgaggctacagccagacgaatattcagcaacgcccacacgtaccacatcaactccatc
tcggtcaactcagacctacagacctttatctccactgatgacctccgggtgaacctatgg
aacctggagatcactgaccggagcttcaacattgtggacatcaagccagccaacatggag
gagctgacggaggtaatcacctcagctgagtttcatccccagcagtgtcacacctttgcc
tacagtagcagcaagggctcaatccgcctgtgtgacatgagactggctgccctctgtgac
aagcactgcaaatactttgaagaaccggaagatccagcaacacgctcttttttctctgaa
atcatctcatctatctcagacgttaagttcagccacaatggacgctacctgatgacaaga
gattacctcaccgtcaaggtgtgggaccttcaaatggagaacaaacccgttgagacctac
caggttcatgactatttacgaggcaaactttgttctctttacgagaacgactgcatcttc
gacaagttcgaatgtgtctggaacggctcagacagtgtcatcatgactggctcgtacaac
aacttcttcagaatgtttgaccgtaacacaaaacgagacgtcacactggaagcatccaga
gagaacagcaaaccccgagctattctgaagcctcgcaaggtgtgtgtgggtggaaaacgc
cgtaaggatgagatcagcgtggacagcctggactttagcaaaaagatccttcacacaaca
tggcacccatacgagaacatcattgctgtagccgccaccaacaacctctacatcttccag
gataaggtgaactaa
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