Oryzias latipes (Japanese medaka): 101161318
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Entry
101161318 CDS
T02443
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03015
mRNA surveillance pathway
ola04261
Adrenergic signaling in cardiomyocytes
ola04382
Cornified envelope formation
ola04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101161318
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
101161318
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
101161318
09158 Development and regeneration
04382 Cornified envelope formation
101161318
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ola01009
]
101161318
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101161318
03036 Chromosome and associated proteins [BR:
ola03036
]
101161318
Protein phosphatases and associated proteins [BR:
ola01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
101161318
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
101161318
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
101161318
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_1st
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
101161318
NCBI-ProteinID:
XP_020562361
UniProt:
A0A3B3HHE4
LinkDB
All DBs
Position
10:20519546..20555803
Genome browser
AA seq
544 aa
AA seq
DB search
MRVPVLHKQLGPSHRQGEVEKRTVSVGSPGRVARTLDCAACLLSGASDAVIIAPRAADTE
APSPPAPPRSISDWLWRRQCGCGAPNASLFTRLPAPEKMKCFSRYLPYLFRPPSTILSST
CHTEADIISTVEFNSTGELLATGDKGGRVVVFQREQESKTQPHRRGEYNVYSTFQSHEPE
FDYLKSLEIEEKINKIKWLPQQNAAYFLLSTNDKTVKLWKISERDKRPEGYNLKDEDGRI
RDPSTITSLRVPVLQPMDLMVEATARRIFSNAHTYHINSISVNSDLQTFISTDDLRVNLW
NLEITDRSFNIVDIKPANMEELTEVITSAEFHPQQCHTFAYSSSKGSIRLCDMRLAALCD
KHCKYFEEPEDPATRSFFSEIISSISDVKFSHNGRYLMTRDYLTVKVWDLQMENKPVETY
QVHDYLRGKLCSLYENDCIFDKFECVWNGSDSVIMTGSYNNFFRMFDRNTKRDVTLEASR
ENSKPRAILKPRKVCVGGKRRKDEISVDSLDFSKKILHTTWHPYENIIAVAATNNLYIFQ
DKVN
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgagagtccccgtcctgcataaacaactcggcccctcacatcgacagggcgaagtagag
aaacggaccgtttccgttggctccccggggcgggttgcacgaaccctggactgcgctgcc
tgcctcctgtcaggggcaagtgatgctgtcatcatagccccccgcgccgcggacacagag
gctccttcccctcccgcacctccccgtagcatctctgactggctgtggcgacggcagtgc
ggatgtggagccccaaacgcatcgctcttcacccgtcttccagcaccggagaagatgaaa
tgtttttctcgctatctgccgtacctcttccgccctccgagcaccatcctgtcctccact
tgccacaccgaagctgacattatctcaactgtggagtttaactcaacaggggagctcttg
gccaccggggataagggaggtagagtggttgtcttccagagggagcaggagagtaagaca
cagccccatcgacgaggggagtacaatgtttacagcacattccagagtcacgagcctgaa
tttgactacctgaagagcttggaaattgaagagaagatcaataaaattaaatggcttcca
cagcagaatgcagcatacttcctgctctccacgaacgacaagactgtgaagctgtggaag
atcagcgaaagggacaagcgtccggaaggctacaacctgaaggatgaggatggaagaatc
cgagacccatcaaccatcacctcactacgggtgccagtgctgcagccgatggatttgatg
gttgaggctacagccagacgaatattcagcaacgcccacacgtaccacatcaactccatc
tcggtcaactcagacctacagacctttatctccactgatgacctccgggtgaacctatgg
aacctggagatcactgaccggagcttcaacattgtggacatcaagccagccaacatggag
gagctgacggaggtaatcacctcagctgagtttcatccccagcagtgtcacacctttgcc
tacagtagcagcaagggctcaatccgcctgtgtgacatgagactggctgccctctgtgac
aagcactgcaaatactttgaagaaccggaagatccagcaacacgctcttttttctctgaa
atcatctcatctatctcagacgttaagttcagccacaatggacgctacctgatgacaaga
gattacctcaccgtcaaggtgtgggaccttcaaatggagaacaaacccgttgagacctac
caggttcatgactatttacgaggcaaactttgttctctttacgagaacgactgcatcttc
gacaagttcgaatgtgtctggaacggctcagacagtgtcatcatgactggctcgtacaac
aacttcttcagaatgtttgaccgtaacacaaaacgagacgtcacactggaagcatccaga
gagaacagcaaaccccgagctattctgaagcctcgcaaggtgtgtgtgggtggaaaacgc
cgtaaggatgagatcagcgtggacagcctggactttagcaaaaagatccttcacacaaca
tggcacccatacgagaacatcattgctgtagccgccaccaacaacctctacatcttccag
gataaggtgaactaa
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