Oryzias latipes (Japanese medaka): 101161421
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Entry
101161421 CDS
T02443
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03013
Nucleocytoplasmic transport
ola03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101161421 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
101161421 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101161421 (nup153)
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101161421 (nup153)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
101161421
NCBI-ProteinID:
XP_011479570
UniProt:
H2MBF7
LinkDB
All DBs
Position
11:complement(23086840..23103614)
Genome browser
AA seq
1515 aa
AA seq
DB search
MTAIRRRNTDRHSDERTMAATGGGKIRSRRYHIASKPYAKSKQQTGLISRVTDTVRSIVP
SWLQKYFKNGDSSEGGELLQGSDQNCQLPPPSPKSSEEARPPLDGRNSPEPSTSTTEPST
SRSALNFQDNVLSRPPLSRTHLHLAPLETSSPTFGGSSNLFSQPSTSSAPGPFSTGFSLV
KEIKDNLSQHEDDNISTTSGFSSRASDKDVPTSKTASLPLLWSPEMERTNSGPQPSQSSL
KKPSFNLSVFGTSSNSTLSSSVLNSSQLGDSPFYPGKTTYGGAAAVRSSRSRPGTPYQAP
VRRQIKARPAGAQPCGVTSATARRILQSLERMSSPLADARRIPAASSNPSPSMDGMNMDM
SNDQAKRKRMDLPFPPVQKLVVPVTASVSGNRSVSFKPTLTPGGFRTLSRSTRDKTPTRQ
SPQLPEESPGPSQSTRSLSGAVYPLSSTPAPSSVSSGGGKIKRERTTARPSKRTEDDEVA
EVPNLPAISLPIGGSALPSFSFSTPLPPPTTSTSVTSSPEITVATPAKEMPPNKDPPKAL
TPPCVPFTFSSPIVKATAASPPSYSSSPGFTFSAPVAKLGPSMSNGSLSAPIAVAVKPVT
SNKTEDFDGPFKPAKTLKQGSVLDLLKSPGFASSVTSVSPRTITTSQQESPQSTASPSST
TTASSSSSSSTGFSNLFKAPEGWSCDVCLVQNKQSNLKCVCCMAPKPNLSSKPTDSKPSP
SAPVRVENSSASTAPTTTTTTGFGTMFSKPAGTWDCDTCLVVNKPDAVKCVACETAKPGT
GLKPSLTFSSAFTTVKTPPASTAPVSTGAGGLGEKFKKPEGAWECDTCLVQNKAEDLKCV
TCTAAKPGASTEPSSYSSSSSSSAPLFGLADKFKQPEGSWECDVCCVQNKAADVKCVACQ
AVKPGSNVEAKAFSSSFGTLSGATSGSSTSNSSSTFGGFKFGTSDTTSGSGSASASFKFG
TLPSSSSSSPSVGFKFGVQFGNSSSETSSKEAAASSGFKFGTSSGGFKFGTSCSDDKKSD
QPASDPAFKFGASGGPVFGSATSSTEGSSPKGGFTFGLSKPKDETSETTPPCSSQDKVNI
PASSNHTTTENVTTTSATTTKTSSVFQRLGEPSLATNTSKTPPTFGSLQAGKEPAALTFA
FGKPEEKKESNASAAPPNFVFGGATKEKETPPAAAPAGGFTFGKTGGSTEQPPPAYSFGK
SADKSEQSTSEAPKPTFSFGQSAADSAPPPKQAFSFMASNPNSTASSTPTAAPTLFSATA
GNSNSTTPAPSAPPSSFLFGQPPTTTSDTAPAKPFLFGNSQEQPPASSGAPVNSAPAQPF
IFGASAAPTAASASSFGFGTTASSAASTSAPSAAPSPFAFSSAPSGGFGDNQTPSFGSTF
ASPFPATPSQAPPAFGAKPNAAPAFGQQTNSTAVFGTSVNAAPSGGGFQFGGASAFGSTN
NAAPGVFTFGVGAAASAAPPANSSIAPQSGAAGGGFNFSQSPAFNIGSTKFSSPSPAVTP
TIAGRKIKTAVRRRK
NT seq
4548 nt
NT seq
+upstream
nt +downstream
nt
atgacagctatccggcgccgaaacaccgatagacactcagacgaaagaaccatggcggcc
acgggtggagggaaaattagaagcaggagatatcatatcgcttctaaaccgtacgccaag
agtaaacagcagacaggcctcatcagtagagtcacagatacagttagaagcatcgttcct
tcctggctgcagaaatatttcaaaaatggagattcatctgaaggaggggagttgctgcaa
ggttcagaccagaactgccagctgccgcctccttctcccaaaagcagcgaagaagcgcgt
cctcctcttgatggacgcaactccccagagccaagcactagtaccacagagccctccact
agtcgttcagccttgaattttcaggacaatgtgctgtctcgacctcctctgagtcgtaca
caccttcatttagctccactggagacttcttcccccacctttggaggttccagcaacctt
ttctcccagccttccacctcctcagcccctggacccttttccaccggcttttctttggtt
aaagaaatcaaagacaacctctctcagcatgaagatgataacatctccactacaagtgga
ttttcttcccgtgcatcggacaaagatgttcccacttccaaaactgcatcacttcctctt
ctttggtctccagagatggaaagaacaaactctggacctcagccatctcagtctagtttg
aaaaagccgtcttttaacctgtcagtctttggcacctcttctaattcaacgttaagcagc
tcagtgctgaactctagccagctcggagattcacctttctacccagggaagaccacatat
ggtggggcagctgcagtgaggagctcccgcagtcgtcctggaacaccttaccaggctcca
gtgagaaggcagatcaaggctaggcctgctggggcacagccctgtggtgtgaccagtgct
accgctagacgaatcctgcagtctttagagcgcatgtcaagtccactggctgatgccagg
agaatcccagcagcttcatccaacccgtcaccatcaatggatgggatgaacatggatatg
tcgaatgatcaggcaaaaaggaaacggatggacttgcccttccctccggtgcagaagctt
gtggttcctgtgaccgcttctgtttcaggaaatcgatccgtgtccttcaaaccaactttg
acacctggagggtttagaactctgagcaggagcacaagggacaaaacgcccacaagacaa
tcacctcaactacctgaagaaagcccaggtccttctcaaagcacaagaagtcttagtggg
gctgtctaccctctgtccagcacccctgcaccttccagtgtgagctctggagggggcaag
atcaagagggagagaaccacagctcggccctccaagcgaaccgaagacgatgaggtggct
gaggtgccaaacctgcctgccatttctttgcccattggagggtcggccttgcctagcttc
agcttttctactcccctgcctcctcccaccacctccacttctgttacctcctctcctgag
atcacagtggccactcctgcgaaggagatgccccccaataaggatccaccaaaggccttg
acaccaccgtgtgtacctttcacattctcctcacccatagtcaaagccactgctgctagc
ccaccctcctattcctcctctcctggttttactttcagcgcgcctgtagcaaagctgggc
ccctccatgtcaaacggaagtctttctgctcccatcgctgtggctgtgaagcccgtaaca
agcaacaagacagaagactttgatggacccttcaaaccagccaagacactgaagcaaggc
agtgtgctggatctgctcaagtcccctggttttgcttcctctgttacttcggtttctccc
aggaccatcaccacttcccagcaggaatctcctcagtccactgcctccccctcctctaca
actacagcctcttcatcctcatcttcatcaacagggtttagtaatttgtttaaagctcca
gaaggctggagctgtgatgtgtgcttagttcagaacaaacaatcaaatttaaagtgcgtg
tgttgtatggcccccaaacccaacctctcatccaaacctacggacagtaaaccttcaccc
tccgcgcctgttagggtggagaacagcagcgcaagcaccgcccccaccactacaaccacc
actggttttggtacaatgttctccaagcctgcaggaacctgggactgcgacacgtgtctc
gttgtgaacaagcctgatgcggtgaagtgtgtggcctgtgaaacggccaagcctgggacc
gggctcaaaccctccctgactttttcctctgcgtttacaaccgttaagacgccacctgca
tccacagcccctgtttccactggtgctggtgggttaggagagaaattcaaaaaacctgag
ggagcttgggagtgtgacacgtgtttggtacagaacaaagcagaagaccttaagtgtgta
acctgtactgctgctaaaccaggtgcttcaacagagccttcctcctactcatcatcatca
tcaagcagtgccccactgtttggattggcagacaagttcaagcagccagaaggatcatgg
gagtgtgacgtctgctgtgtgcagaataaggctgcagatgtgaagtgtgttgcctgtcaa
gcagtgaaacctggctccaacgtagaagccaaagcctttagttcatcttttggcaccttg
tctggtgcaacatcaggatcctctacttcaaactcttcttctacctttggaggttttaag
tttggcacgtcagacaccacatctggatctggatctgcatctgcaagctttaagtttgga
actttgccgtcttcttcctcatcctccccatcggttggattcaaatttggggtccagttt
ggaaactcctcatcagagacgtcttcaaaagaagcggctgcctcatcagggtttaagttt
ggcacctcctctgggggttttaaatttgggacttcctgtagcgatgacaaaaagtctgac
cagcctgcctcagatcctgctttcaagtttggagcgagtggtgggcccgtatttggaagt
gcaacatctagcacagaaggcagctctcctaagggggggttcacctttggactgtcaaaa
cctaaagatgaaacatccgaaaccactcctccttgttcctcgcaggacaaagttaacatt
cctgcatcatcaaatcacaccacaacagaaaacgtaactacaaccagtgccacaacaacc
aagacatcgtctgtatttcagagattaggtgaaccaagcctagcaaccaacacgtccaaa
acaccgcctacatttggatcattacaggcaggcaaagagccagcggctctcacttttgcc
ttcggaaagccagaggagaagaaagaatcaaatgcctctgcagctccgccaaactttgtg
ttcggaggtgccaccaaggaaaaagaaactccacctgctgcagctcctgcaggaggtttt
accttcggaaagaccggaggttcaacagaacaacctccacctgcttattcgtttggaaag
tctgcagacaagagtgaacaatccacttcagaggcaccaaagcccacattcagctttgga
caaagtgctgcagattctgctcctcctccaaaacaagcattttctttcatggcaagtaat
cccaacagcaccgcctcatccaccccaactgctgccccaactttattcagcgccactgct
ggcaacagtaacagcaccactccggctccctcagcaccccccagctctttcctgtttgga
cagccccccacaaccaccagtgacactgctccagcaaaacccttcctctttggcaacagc
caggagcagccgcctgcttcatcaggtgctccggtgaactcggcgccggctcagccgttt
atctttggcgcttcagctgcacctactgctgcgtctgcttcctcctttgggtttggaaca
acagcgtcctctgctgcgtccacatcagcgccatctgctgctccctcccccttcgcattc
agttctgccccctctggtggttttggagacaaccagactccttcgtttgggtccactttt
gcatctcctttcccggccacgccttcccaggcaccaccagcctttggggccaaacccaat
gccgctcctgcttttggccagcagaccaactccacagctgtttttgggacttctgtgaat
gctgctccaagcggaggaggcttccagtttggaggagccagtgcatttggctccacaaac
aacgctgcccctggtgtgtttacttttggggtgggggctgcagcttcagcagcacctcct
gccaactcctccatcgccccacagtcgggagcagctggcggtggattcaacttttcacag
tctcctgcattcaatattgggtcaacaaagttctcctctccatctccagctgtgacgcca
acgatcgccgggcgcaagatcaagactgcagtgcgccgccgcaaatag
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integrated database retrieval system
