Oryzias latipes (Japanese medaka): 101161448
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Entry
101161448 CDS
T02443
Symbol
srsf5
Name
(RefSeq) serine/arginine-rich splicing factor 5 isoform X4
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03040
Spliceosome
ola05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101161448 (srsf5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
101161448 (srsf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ola03041
]
101161448 (srsf5)
Spliceosome [BR:
ola03041
]
Common components
Common spliceosomal components
SR proteins
101161448 (srsf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_5
Nup35_RRM_2
CDC45
OB_RNB
SET_assoc
Motif
Other DBs
NCBI-GeneID:
101161448
NCBI-ProteinID:
XP_004082127
UniProt:
A0A3P9K2Y2
H2LZQ3
LinkDB
All DBs
Position
22:1441366..1445917
Genome browser
AA seq
272 aa
AA seq
DB search
MSGSRVFIGRLSPQARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGK
ELLSERVTIEHARSRRGRGGGPPGMARFGGGYRQSRNTGSRYGPPVRTEHRLIVENLSSR
ISWQDLKDLMRKAGEVTFVDAHRPTKNEGVVEFASRSDLKNAISKLDGTELNGRKLKIFE
DSRRSRSRSRSYSRSRSRSRSRSRSRSRSRSVSRTPEKKMSGGGKSAARSPSRSRSRSRS
GSRSPAQNKQSRSRSRSQSRSRSRSPSADSKH
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaagtcgcgtcttcatcggccgcttgagccctcaggcccgagagagagacgtg
gagaagttctttaagggttacggaagaatccgggagatcaacctgaagaacggatttggc
tttgtggaatttgatgaccacagagatgcagatgatgcagtttatgaactaaatggcaaa
gagctgttgagtgaaagggttactattgaacatgctcgctccaggagaggaagagggggc
ggacccccgggtatggcacgttttggtgggggttatcgacagtcccgcaacactggatcc
aggtacggcccacctgtgcggacagaacacaggctcattgttgagaatctgtcctcccgg
atcagctggcaggacctgaaagacctgatgagaaaagcaggtgaagtcacgtttgtggac
gcgcacagacccacgaaaaacgagggggtggttgagtttgcctcccgcagtgacctgaag
aacgccatctccaagctggatggaacggagctgaacgggcgcaaacttaagatctttgag
gacagcaggagaagcaggagccgctcccgcagctactcccgctccaggagtcgctcccga
agccgcagccgctccaggagccgctcccgctccgtcagccgcaccccagagaagaagatg
tcaggggggggcaagtctgcagccagatccccctccaggtccagatcccgctccaggtcc
ggctcgcgctctccggcccagaacaaacagtctcgctcccgatcccggtcccagtcccgg
tcgcgctcccgctcgccctcggcagacagcaaacactaa
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