Oryzias latipes (Japanese medaka): 101161522
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Entry
101161522 CDS
T02443
Symbol
nup62
Name
(RefSeq) nuclear pore glycoprotein p62
KO
K14306
nuclear pore complex protein Nup62
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101161522 (nup62)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101161522 (nup62)
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101161522 (nup62)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
DUF4164
Motif
Other DBs
NCBI-GeneID:
101161522
NCBI-ProteinID:
XP_004081805
UniProt:
H2MSM1
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All DBs
Position
21:complement(22074356..22076581)
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AA seq
553 aa
AA seq
DB search
MSGGFNFGQPSGFAFGAQKTTAAAPAPGFSLTNSTAAASGTGFSFGTPTQSQTNANPTGG
FSFGAPAKNSSAGGTGFSFGTPNAAAATGTFGLATTTQTTAATGLTLGSSAAPAAGSGFT
LGGMLSSQTNSAAPAGGGFNFGATSQAPPAATVAPTTTTASGGMAFGGFSFGAPKVQVTS
AASTTIAAGGGGFSFGTPAPSTLTQPAPAAAAPAAPTQGGGFNFGIKPSSTPAPPASTQS
APTQSAPTLGLSLFASPIITTSAAAPTSGFTLGAAPALSTSMAASTAAGTAPSFMLKPLG
SVASTAANTGSTTTTTTAAVTANATAGFTLGFKPPTISSSTTASTATAVTTTTTAPPVMT
YAQLEGLINKWSLELQDQERHFLQQATQVNAWDRMLVENGEKITSLHKEMEKVKLDQRRL
NQELDFILSQQKELEDLLCPLEETVKEQSGTIYMQNADEERERTYKLAENVDAQLKRMSQ
DLKEIIEHLNTSSGPADTSDPLQQICKILNAHMDSLQWIDQNSVLLHRRVEEVSKQCDTQ
RKEQEKTFRLTFD
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcggattcaacttcgggcaaccttcgggttttgccttcggagcgcagaagacc
acagcggccgctccggccccgggcttcagtttaacgaactccacggctgcggcttcggga
acgggcttctcttttggcactccgactcagagtcagaccaacgccaacccgaccggtggc
ttcagttttggcgcaccggctaagaactcttccgccggcggcaccggcttctcctttggc
acacccaacgccgccgccgccaccggcacgttcggcctggccacgactacccaaaccacc
gccgccactgggttgaccttaggctcctcggccgctccagctgcggggtccggcttcacc
ctgggcgggatgttgtcttcgcagacgaacagcgccgctccagcgggagggggcttcaac
tttggggctacctcccaggccccacccgcagcgacagttgcacctacaacaaccaccgca
tcaggtggcatggctttcggagggttcagcttcggagcgccgaaagtccaggtgacctca
gctgcaagcacaaccatcgcagcggggggaggaggcttcagcttcgggacccctgccccc
tccaccctcacccagccagccccagcagctgcagctccagcagctccaacccagggtgga
gggtttaacttcggaattaaaccctcatcaacaccagctcctcccgcatccacccagtca
gcccccacccagtcagcccccaccctaggcctgtctctgtttgcgtcacctatcatcaca
acctctgcagcagcgccaacttcaggttttactttgggtgcagctccagcgttgtcaacc
agcatggcagcatccacagctgcaggtacagctccatccttcatgctcaagcctctgggg
tccgttgccagcacagcagcaaacaccggctccaccaccaccacaacaactgcagctgtc
acagctaatgccaccgcaggcttcacgctgggattcaaacctccgaccatctcaagctcc
acaacagcctccacagcaacagccgttacaaccaccaccacggcccctccggtgatgacc
tacgcccagctggagggtctcataaacaagtggagtcttgaacttcaggaccaagagagg
catttcttacagcaggcaactcaggtcaacgcttgggacagaatgctggtggagaacggg
gaaaagatcacgtctctgcataaggagatggagaaggtgaagctggaccagagaaggctc
aaccaggagctcgatttcattctgtcccagcagaaggagctggaggacttgctttgccct
ctggaagagactgtgaaggagcagagcggaaccatctacatgcagaacgcagacgaggaa
cgcgaaagaacatacaagctcgctgagaacgtggacgcccagctgaagaggatgtcacag
gacctgaaggagatcattgagcacctgaacacatccagcgggccggcagacaccagtgat
ccacttcagcagatttgcaagatcctgaatgctcacatggattcgctgcagtggatcgac
cagaactctgtcctgctgcacagaagagtggaggaagtgtccaaacagtgcgacacccag
cgcaaagagcaggagaagacctttcgtctaacctttgactga
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