Oryzias latipes (Japanese medaka): 101161583
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Entry
101161583 CDS
T02443
Name
(RefSeq) myomesin-1 isoform X1
KO
K24495
myomesin
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101161583
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ola04990
]
101161583
Domain-containing proteins not elsewhere classified [BR:
ola04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
101161583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Ig_2
ig
V-set
Pur_ac_phosph_N
Tissue_fac
C2-set_3
DUF7444
C2-set_2
Motif
Other DBs
NCBI-GeneID:
101161583
NCBI-ProteinID:
XP_011485367
LinkDB
All DBs
Position
17:29416509..29443976
Genome browser
AA seq
1509 aa
AA seq
DB search
MSGSIQAVQKQHLHQQQEKQQQQHHHYESSYYLSTKSSVSQQAFSASTTTTTSRRQKKSV
KVEKGQEGVKLSSIPKTAKGSYLAMDKDKEVIGYVVPVFRANHDTVRGLMEAQEDEVAEE
GINYVAMRNLFVREAVEVKVEKKTRTRNVRESADRLELGKTMEEWSEFRKKMNPDSLTHP
PEFIVKPRGQTVLEGKTVKLHCTVAGWPKPRIAWYKNNVLIDAKAHPEKYTAESSYNMHS
LEIKNCDFLDTAQYCASALNVKGEASSVATVVVKRFQEGEEAGPLDPKPHGFCPEYGVTF
ETTIIDKFDVAFGCEGETLSLGCTVVIYPTVKKYQPEVVWYRDSVPLKPSKWVHHHWSGE
RAILTLTHLNKEDEGMYTLRVNTKSGFETHSAYVFVRDAEVELEGVPVAPLDVRCHDANK
DYVVVTWKQPAVEGSSPILGYYIDRCEVGAHHWAQCNDAPVKYARFPVTGLVEGRSYMFR
VRALNSAGVSRPSRVSEAVVAMDPSDRARLRAGPSAPWTGMIKFTEEDSTVGIVPGEPTD
VVVTEATKSYVVLAWKPPVQRGHEGVMYFIEKRISGSDAWQRVNTGMPVKSPRYALFDLS
EGKSYSFRVRSCNSSGVGGPSEPTEEVTVGDILDLPSAPGAPVVIRNTGTSVVVTWKASK
DVKHLAGYYIESSVVGTDVWTACNNKPVKQTRFVCHGLITGYNYVFRVKAVNAAGYSQSS
PHSDAVVVQPAISVPGQPTGVTLLEALKDYMVLGWTPPADNGGADVRGYFVDYRTVKGGV
LGQWHEMNHQALTAASYKAENLKENVFYQFRVRAVNMAGVSKPSLPSASLECKEWTITVP
GVPVGLRVLEVRDTSAVVLWDRPLFDGRSPVNGYYLDLKVASEGEGGWKAAHEKTNKSKY
MKVTQLTAGASYVFRVRAQNLAGVGKPSAVLGPIVAQTRPGTKEIYVDVDGDGRISMVFE
CSEMTEGSEFIWSKNYQAMTDTSRLTICNEKGRSRATFNSPSLEDLGTFSCMVTNTDGIS
SSYTLTEEGLLRLLDLSHEHKFPVIPFKSEMAMELLEKGRVRFWTQLEKFTSACQVEYVF
NDAIIEDGEKYSMNFNKSTGVIEMFMDSLEVTDEGTFTFNLVDGKAKGTTSLVLIGEEFK
ELQRKSEFERAEWVRKQGPHFVEYLNFAVTPECDVLLKCKIGNVKPATEIVWSKDCIEIT
EEDEEAKKIEKQDEELLFNIGKWVIKQEKKKEKERKKPSAEDAHRPPRPKISKTDMGVYD
VFLKDERGKDKSSFNLTDAGYQAVMNELFRVIANSSSEVQVVSTENGIILSSSVTYYDEN
LRVGWLHKDAKIAASERVKSGVTGEQLWLKISEPTEKDKGKYTMDIFDGKDGVKRVFDLT
GKAWDEAFEEFQRLKAAAIAERNRARVVGGLPDVVAIQEGKSLNLTGNVWGEPTPEVCWT
KNDKELVSDERYKLKFEHGKFASITIAAVTTADSGKYALVVKNKFGKEAGEFTVSVYNPE
EEESKEDKK
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggatcaatacaagcggtgcagaagcagcatctgcaccagcagcaggagaagcag
cagcagcagcatcatcactatgagagcagctattacctgagcaccaagtcgtctgttagc
cagcaggctttctccgcctccacgaccacgaccaccagccgtcgccagaagaagtctgtg
aaggtcgagaaagggcaggagggggtcaaactgagctccatacccaagacagccaagggc
agctacctggccatggacaaggacaaagaggtcataggttacgttgttcctgtgttcaga
gccaaccacgacacagtccggggtctgatggaggcccaggaagacgaggtcgcagaggag
gggatcaactacgtggccatgaggaacctatttgtcagggaggctgtggaggtcaaggtg
gagaagaaaacccgaaccaggaacgtcagggaatctgcagaccgcctggagctggggaag
acgatggaggaatggtccgaattccgtaagaaaatgaacccggacagcctgacacaccct
ccagagttcatcgtgaagccgcgtggacagaccgtgctggaggggaagaccgtcaagctg
cactgcactgtggccggatggcccaaacccaggatcgcctggtacaaaaacaacgtgctc
atcgacgccaaagcccaccctgagaagtacaccgcagagagcagttacaacatgcactcc
ctggagatcaagaactgtgatttcttggacactgctcagtactgcgcctccgctctgaac
gtgaagggcgaggcttcttctgtggccactgttgttgtcaaaagatttcaggagggcgag
gaagcaggcccgcttgatcctaaaccacatggtttctgcccagagtatggagtcaccttt
gaaaccaccatcatcgacaagtttgacgtcgcctttggctgcgagggcgagacgctgagt
ctgggctgcaccgtggtcatttatcccaccgtgaagaagtaccagcctgaggtcgtgtgg
taccgagactctgtgcccctgaagccctcaaagtgggtgcaccaccactggtccggagag
cgggccatcctcaccctgacccacctgaacaaggaagacgagggcatgtacacgctccgc
gtcaacaccaagtccggcttcgaaacccactctgcctacgtctttgtccgagatgctgag
gtggagttagagggggttcccgtggcccccctggacgtgcgctgtcatgatgccaataag
gattatgtggtggtgacctggaagcagccagcggtggagggcagcagccccatcctcgga
tattacatcgacaggtgtgaagtgggcgctcatcactgggctcagtgcaacgacgctcca
gtcaagtacgcccgcttccccgtcaccggcttggttgaaggccgctcctacatgttccgg
gtgcgcgccttgaactcggcgggggtcagccgtccgtcccgcgtctccgaggcggtggtc
gccatggacccctccgacagagctcgactcagagctggaccttcagccccctggaccggg
atgatcaagttcacagaggaagactccactgtgggaatcgtacctggagagccaactgat
gttgtggttaccgaggcaaccaagagctatgtggtgctggcctggaagcccccggttcag
aggggtcacgagggggtcatgtacttcatagagaagcgtatttcaggatcggacgcctgg
cagagggtgaacacgggaatgccggtcaagtctccgcgctacgccctctttgacctctca
gagggtaaatcctacagcttccgcgttcgctcctgcaactcctccggcgtgggcgggcct
tctgagccgacggaggaggtcaccgtcggggacatcctcgacctgccgtcagcccctgga
gcgccggtggtcatcaggaacacaggcacctcggtggtggtcacatggaaggcctccaag
gatgtcaaacacttagctggctactatattgaaagcagtgtggtggggactgacgtgtgg
acggcttgcaacaataaacctgtcaagcagaccaggtttgtgtgccacggcctcatcacg
gggtacaactacgtgttcagggtgaaggcggtgaacgccgccggatacagccagagctcc
cctcattctgatgctgtggtcgtgcagcccgccatctccgtccccggacagcccaccggg
gtcaccctgctggaggctctgaaggactacatggtgttgggttggaccccgcctgccgac
aacgggggagctgatgttcggggctattttgtggactacagaaccgtcaaaggaggagtg
ttgggacaatggcacgaaatgaaccaccaggccctgaccgcagcctcctataaggctgag
aacctgaaggaaaacgtcttttatcagttcagagtgcgagccgtgaacatggcaggcgtg
agcaaaccttcccttcccagtgcaagcctggagtgcaaggagtggaccatcacagtccca
ggtgttcctgttggtcttcgtgtgctggaggttcgcgacacctccgccgttgttctgtgg
gaccgccccctgttcgacggccgcagtcccgtcaacggctactacctggacctgaaggtg
gcgtcggagggggagggaggctggaaggcggctcacgagaagaccaacaaaagcaaatac
atgaaggtgacccagctgacggccggagcatcgtacgtctttcgtgtgcgcgctcaaaat
ctggctggagttggaaagccttcagcagttttaggtccgattgtagctcagacacgccct
ggcaccaaagagatttatgtggatgtggacggcgacggcaggatttctatggtcttcgaa
tgctctgagatgacggaaggctcagagtttatttggtccaagaactatcaggcaatgacg
gacacgtctcgcctgaccatctgcaacgagaagggcagatccagagcgaccttcaacagc
ccgtccctggaggatctcggcaccttctcctgcatggtcaccaacaccgacggcatctcc
tcaagctacactctcactgaggagggtctcctgcgtcttttggaccttagtcatgaacac
aagttccccgtgattcccttcaagagtgagatggccatggagctgcttgagaagggccgc
gtgcgcttctggactcagcttgagaagtttacctctgcctgccaagtggagtacgtcttc
aacgatgcaatcatcgaagacggggagaaatacagcatgaacttcaacaaatccacgggc
gtcattgagatgttcatggactctctggaggtgacagacgagggcaccttcacctttaac
ctggtggatggaaaagcgaaaggcactaccagccttgtgctgattggagaagaatttaag
gagcttcaaagaaaatcagagtttgagagggcagaatgggtcaggaagcaaggtcctcac
tttgtggagtaccttaactttgctgtaacacccgagtgtgacgtattgctgaaatgcaag
atcggaaatgtcaaacctgcaacggagattgtttggtccaaggactgcatcgagattaca
gaggaggacgaggaggcgaagaaaattgagaaacaggacgaagagctgctgttcaatatc
ggaaagtgggttattaagcaagagaaaaagaaagaaaaagagcggaaaaaaccatcggca
gaggacgctcatcgaccgccgagacctaaaatatcaaaaacagacatgggggtttatgat
gtcttcctgaaggatgagaggggcaaagataagagctccttcaatctgacagatgcagga
taccaagctgttatgaatgagctgttcagggtcatcgctaactcctccagtgaggtccaa
gtggtcagcactgaaaacggcatcattttgtcctccagcgtcacatactatgatgagaac
ctgcgtgtcggatggcttcacaaagatgccaagattgcagcttcagagagagtaaagtct
ggagtcacaggcgagcagctttggctgaagatcagcgaacccactgagaaggacaaagga
aaatacaccatggatatttttgatggcaaggacggcgtgaagagagtctttgacctcact
ggaaaagcttgggatgaagcttttgaagaattccaaagacttaaggctgcagccattgca
gagagaaaccgtgctcgtgttgttggaggtttgccagatgtggttgcaatccaagagggc
aagtccctgaacctgactgggaatgtgtggggcgagcccacaccagaggtttgctggacg
aagaacgacaaggagctcgtttccgacgagcgctacaaactcaagttcgagcacggcaag
ttcgccagcatcacaatcgcggcggtcaccacggccgactctggcaaatacgctctggtg
gtcaagaacaagtttggcaaggaggccggcgagttcaccgtgagcgtgtacaacccagag
gaagaggagagcaaggaggacaagaagtga
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integrated database retrieval system