Oryzias latipes (Japanese medaka): 101161585
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Entry
101161585 CDS
T02443
Name
(RefSeq) ephexin-1
KO
K20687
Rho guanine nucleotide exchange factor 15
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101161585
Membrane trafficking [BR:
ola04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
101161585
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SH3_2
SH3_9
PH
SOS1_NGEF_PH
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
101161585
NCBI-ProteinID:
XP_023822043
LinkDB
All DBs
Position
18:14697547..14719785
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AA seq
952 aa
AA seq
DB search
MSDQERSGSPSPLKRETKSKPEIPPKPPSTSSPADSSSISDFSGGKVKNIVNRLSKQELN
GLCGQLVNGSADITPDKETKRPPRTKPKPERSSIQLLASVEQTPPLPLKRSVFARKQKEN
QEGEEADDTDGGRPAPDGKEVEALTGGDEVEAEQGQRSTPRTRCEADCSCICHLQRPGMM
LMWVPVVGEEEEEDEGCRVKDAKEKQAGGVREEKQTDREVECRTSEVDGGVKQEKAQFQR
SLNALLAEAPRRQSDSGSPAVHPDPPPPEPAEVEEDDIYEFTLPVFHPAPKKPEKLIVPD
IKVRTAVRQNRLPCSTLRDAADAENPDVPPDIPPRIPIPLPPIPAVAIDRCNSLTNIPGA
TGLSPQRGAALAGSNTLQPVRAAPPPPRTDDRRHSSASLPPHSLNKEEENKGNEEAELPV
TRRDSIKKKISSLWESRLQHEPLYQTYRASVITKEIRRQTVCRNISKTSADYDWAARPSS
NGGGPRSSPIPADKSTLWQDLPQVRESGVLETLTPEQCKYQESMFEVLTSETSYLRSLHV
LTEHFLENRELGEALIIRDTKTLFSNILRVREVSERFLKDLEDRVFQDIVFPDICDIIHY
HSQHNFPAYIDYVRNQIYQEKTYAVLMKTNAQFAAVIARLQESPQCQRLPFVSFLLLPFQ
RITRIKMLIENILKRTKEGTKEEQSASKALESVSKIISECNTEVGKMRQMEELIEVSKTL
EFDKLKAVPIISQNRYLEKRGDLQEMSKGATLFNVRGKFSPVHFFLFNDLLVIAVKKGSE
RFVVIDHAHRSLVQAQIMEEGGSSGLPFENCFVLTLLENHQGRMNERLIKAPSQSDMHRW
LAAFPSSTTADGDEDEVVYEDWDCPQVQCVEQYVAQQADELSLEPAEIINVIRKANEGWY
EGKRLCDGQKGWFPIANVIEITNEHVRRRNLRERYRVIQAARIVTNKPRPVQ
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatcaggaacgctcggggtctccttcacccctcaagcgtgagaccaagtccaaa
cccgagatcccaccaaagcctccatccacgtcttctcccgcagacagcagctccatctct
gacttttctggaggaaaggtgaagaatattgtaaatagactgagtaagcaagagctcaat
ggactctgtgggcagctggttaatggatctgcggacatcacaccggataaagaaactaag
agacctccaaggacaaagcccaaaccagaacggagcagcatccagctcctggcgagcgta
gagcagacgccaccgctgcccctgaagaggagcgtcttcgccaggaagcagaaggagaac
caggaaggagaggaggcggacgacacagatggaggtcgaccagcgcccgatggaaaggag
gtggaggccctgactggaggagatgaagtggaggcggagcagggtcagcgctccaccccc
cgtacccgctgcgaggcggactgcagctgcatttgccacctgcagaggcccggcatgatg
ctgatgtgggtgcctgtggttggggaggaggaggaggaggatgaaggctgcagagtgaag
gacgccaaggagaagcaggcgggtggggtcagggaagaaaagcagacggacagggaggtg
gagtgcaggacttctgaggtcgacgggggtgtgaagcaggagaaagctcaattccagcgc
tctttaaacgctttgctcgccgaggcccccagaaggcagtcagactcgggttcccccgca
gttcatccggatcctcctccaccggagcccgccgaagtggaagaagatgatatttatgag
ttcacgctccccgtgttccaccccgcccccaaaaagccagagaaactcatcgtcccggac
ataaaagtgcgcacggcggttcgccagaacagactgccttgcagcaccttgagggacgca
gccgacgccgagaacccggacgttccgcctgacatcccccccaggatccccatcccattg
ccacccatccccgccgtggcaatcgacagatgtaactccctcaccaacatccctggcgcc
acagggctgagcccacagcggggcgccgccctggctgggagtaacaccctgcagcccgtc
agagcagcccctccgcctcccaggacagacgacaggcggcacagctccgcctcactaccc
ccccactcactgaacaaagaagaggagaacaaagggaacgaggaagcagagctgcctgtg
accagaagagactccatcaaaaagaagatttcctccctctgggagtcccgcctccaacac
gagcctctgtaccagacgtaccgcgcctccgtcatcactaaggagatccgtcggcagacc
gtgtgccggaacatcagcaaaaccagcgccgactacgactgggccgcccgccccagctcc
aacggagggggaccccgaagcagccccatccccgcagacaagagcacgctgtggcaggat
ctcccccaggttcgggagagcggcgtgctggagacgctcacgcctgaacagtgcaagtac
caggagagcatgtttgaagtcctgacctcagagacctcctacctgcgatccctgcacgtt
ctgactgagcacttcctggagaaccgagagctgggggaggcgctgatcatcagggacacc
aaaacgctcttctccaacatcctgcgggtgcgcgaggtcagcgagaggttcctaaaggac
ctggaggaccgcgtgtttcaggacatcgtcttccctgacatttgtgacatcatccactac
cactctcagcacaacttccctgcctacatcgactacgtgcgcaaccagatttatcaggag
aagacgtacgccgtgctcatgaagaccaacgctcagtttgcagcggtcatagctcgcctg
caggaatcgccgcagtgccagcgcctgcccttcgtgtccttcttgctgctgcctttccag
cgaataacccgcatcaaaatgctcatcgagaacatcctgaagaggacgaaagaggggaca
aaggaggagcagtcggcctccaaggctctggagtctgtctccaagatcatcagcgagtgc
aacaccgaggtgggaaaaatgaggcagatggaggagctgattgaagtttccaaaacactt
gagttcgataagctaaaggcggtcccgatcatctcccagaaccgatatctggagaagaga
ggagatctccaggaaatgtccaaaggagcaacgctcttcaacgtgcggggaaagttcagc
cccgtccatttcttcctcttcaacgatctgctggtgatcgccgtcaagaaaggctcggag
cgcttcgtggtcatcgaccacgcgcaccgctccctggtgcaggcgcagatcatggaggaa
gggggcagcagcgggcttccctttgagaactgcttcgtcctgacgctgctggaaaaccac
cagggacgcatgaatgagcgcctcatcaaagccccctcccagtcggacatgcacaggtgg
ctggcagctttccccagctccaccaccgccgacggcgatgaagacgaggtggtttacgag
gactgggattgtcctcaggttcagtgtgtggagcagtacgtcgcccagcaggcggacgag
ctctccctggagcccgccgagatcattaacgtcatccgcaaagccaacgagggctggtac
gagggcaagcgcctgtgcgacgggcagaagggctggttccccatcgccaacgtcatcgag
atcacaaacgagcacgtgaggaggagaaacctccgcgagcgctatagggtgatccaggcc
gccaggatagtcaccaacaagccccgccccgttcagtag
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