Oryzias latipes (Japanese medaka): 101161803
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Entry
101161803 CDS
T02443
Name
(RefSeq) spondin-1
KO
K24427
spondin-1
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ola04990
]
101161803
Domain-containing proteins not elsewhere classified [BR:
ola04990
]
Thrombospondin domain-containing proteins
F-spondins
101161803
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_1
Spond_N
TSP1_spondin
Reeler
TSP1_CCN
TSP1_ADAMTS
Motif
Other DBs
NCBI-GeneID:
101161803
NCBI-ProteinID:
XP_023811710
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Position
6:complement(23478955..23591425)
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AA seq
767 aa
AA seq
DB search
MGMDLHRVFFVLSCVYCAVAFMEEPSGGRSDGFCERIPRAQIQRTRKEGHHEFRLKVEGE
QENYNPGTTYKVLLLATSPAYFRGFTLIALKEGTEGTTPDDYIGQFQIVDKDDTQFMTSC
PPAVTETTPRRRTKIQVFWTAPPSGSGCVILKASIVQKRVIFFQDKGSLTVRLCEKEPVQ
LDTTSAPPIECCACGTAKYRLTFYGNWSEKVHPKDYPRRANHWSALIGASHSRNYVLWEY
GGYASEGVRQVAEFGSPIKMEGEIRQKGDDVLTVIKTKAQWPAWQPLNLRAAPSAEFSVD
RARHLMSFLTMLGPSPDWNVGLSGEDLCTKDCGWIQRLVADLIPWDAGTDSGVTYESPNK
PTIPQDKIRPLTSFDHPQSPFYDPQGGPISPLARVVVERIARKGEQCNVVPDNIDDIVAD
IGQEEKEEDDTPETCIYSAWSPWSACSSATCDKGRRMRQRMLKAQLDLSVPCPHTQDFQP
CMAPGCSMEEPSTCMMSEWISWSACSVSCGMGMRSRERYVKQYPEDGSLCQLHTEETEKC
VVNDECLPSSCVVTEWGEWDPCSVTCGLGMRRRERMVKMPPSDGSMCKAEIAEVDKCMVP
ECHADTCVPTPWSEWSKCSATCGRGIRTRQRMRKTNQADCREETEQKECRLPECSIDCMV
SEWSEWSECNKSCGKGHTIRTRMVKLEPQFGGRACPETIQRKKCKLRKCPGKRKETRGCR
MQPWSSWTTCTKPCGGGIQERLMVARKRAKGSCKDQREIHACNVHPC
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgggaatggatctgcaccgggtttttttcgtcctgagttgtgtgtactgcgcagtggct
ttcatggaggagccctccggaggcaggtcggacggcttctgcgagcggatcccgcgggcg
cagatccagcgcacccggaaggaagggcaccatgagtttcgactcaaggtggagggagag
caggagaactacaatcctggcaccacgtacaaagttctcctcctggcaaccagccccgct
tatttccgaggcttcactctcattgcgctgaaagagggcacggagggcaccacgcctgac
gactacatcggacagttccagattgtcgataaagacgacacccagttcatgaccagctgt
cctcctgctgtgacggagaccacacctcgcaggcgcacaaagatacaggtcttctggaca
gcgcccccctctggttctggctgtgttatactcaaggcgagcattgttcagaaaagagtc
atctttttccaggataaaggctccctcacagttcgactctgtgagaaagaacccgtgcag
cttgacaccacatcagccccccccattgagtgctgtgcctgtggaactgccaaataccga
ctcaccttctatggcaactggtcggaaaaagtccatcccaaagactatccaagacgtgcc
aaccactggtcggctcttattggtgcatcccactccaggaattatgtgctgtgggagtac
ggaggctatgccagcgagggagtccgtcaggtggctgaatttggctcccccattaagatg
gaaggagagattcgacagaagggagacgacgtcctgactgttataaaaaccaaggctcag
tggccggcgtggcagccgcttaacctacgagcggcgccatcagctgagttctcggtggac
cgagcacgccacctcatgtccttcctcactatgctcgggccaagcccagactggaacgtc
gggttgtctggagaggatctctgcaccaaggactgtggctggattcagaggctcgtagcc
gacctcataccatgggatgcaggcacagatagcggcgtcacatatgagtccccaaacaag
cccaccattcctcaagacaaaatcagacccttgaccagctttgaccaccctcagagtcct
ttctacgatcctcaagggggcccaatatcacccttggcccgggtagtggtggaacgtatt
gccagaaagggagaacagtgtaatgtggtcccagacaacatagatgacattgttgctgat
attggacaggaggagaaggaggaagacgacactcccgagacgtgcatctactcggcctgg
tctccctggtcggcgtgcagcagcgccacgtgcgacaaaggccgcaggatgaggcagagg
atgctgaaggcacagcttgacctgagcgtgccctgtcctcacacgcaggatttccagccg
tgcatggccccaggatgcagcatggaggagccatcgacatgcatgatgtcggagtggatc
agctggtcggcctgcagtgtgtcctgcgggatgggaatgaggtcaagagagcgatatgtc
aaacagtatcctgaggacggctcgctctgtcagctgcacaccgaggaaactgagaagtgt
gtcgtgaacgatgagtgcttgcccagcagctgcgtggtgacagagtggggggagtgggac
ccctgcagcgtcacctgtggcctcggtatgagaagacgtgagcgcatggtgaagatgccc
ccctcagacggctccatgtgcaaagcagagatcgcagaggtggacaaatgcatggtgcca
gagtgccatgcagacacctgcgtgcctacgccctggtcggagtggagcaagtgcagcgcc
acgtgtggccgcggcatccggacccgacagaggatgaggaagacgaatcaggccgactgt
agggaggagacagagcagaaggagtgcaggctgcccgagtgctctattgactgcatggtc
tcagagtggtctgagtggtccgagtgcaacaagtcctgtgggaaaggacacaccattcgc
acccgtatggtcaagctggagccgcagtttggggggagagcttgtcccgagaccatccag
agaaagaagtgcaagctcaggaaatgccccggaaagcgaaaggaaaccagaggttgcagg
atgcagccatggagcagctggaccacctgcaccaaaccatgcggaggaggaatacaagag
cgcttaatggtggcccggaaaagggcgaagggcagctgcaaagatcagagagagatccat
gcctgtaacgttcatccctgttag
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