Oryzias latipes (Japanese medaka): 101161935
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Entry
101161935 CDS
T02443
Symbol
caprin2
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101161935 (caprin2)
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
101161935 (caprin2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1q
Caprin-1_dimer
Caprin-1_C
Motif
Other DBs
NCBI-GeneID:
101161935
NCBI-ProteinID:
XP_011489319
UniProt:
H2MB34
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Position
23:complement(11216752..11239447)
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AA seq
883 aa
AA seq
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MVQLYTLPVLDAPHLPEHSVEEDEEDEGQQMKDEVPGMQQVSLEVSTAYHGYETYIEDGL
ICLKHKIRNLEKKKLKLKEYKKRLIQGEELNKDQKAAVEKFEEVLHNLDFARELHKTLDG
LTQNLLKAQKKVVKKDQVERVEAERRRLAMVLKIHYLLGNMQQEHIQKDLMTGNNQAPHI
PSQKLHSLNQLAAMLGVQRDNGLSLDEQMQKAALVYMDLLEGKDQPVAGSTYKLLKEEIT
RLMDCKYLSRFLPQPNKSAELFLGLGSHSTSGTSKELFPRLPLQDVKGPNNPNWKDDFQS
MKEQEPPDSWDAETSDGPSSPLTGVPKPWRGAAVLIPKAVRAASKQRTVSKPRKEKTKKE
QSTKTILQMEIPVEIFQSPPTLPKDPILRKRHLEELMMKIHGSFSFMQDSLLDGENSTSS
IPRPKRLPSGASSPLAYGGLRSPVDILPKVMSSTPLPTRLKERKASVSSEEQCLERADLQ
LSSKDLPHSLQASLQLDGRKQFSSPPLYSRELPDASADESNSSGMSVNGPCKHSPTNGVT
SSNSTPPKRETFSTPPTRRPLTSAQFGNIQAVFKVGPGLPQVGELDYKSKVDFSEPQYSI
ASTQTPSEFAPTDDEPQLVYQPEYMLDNGDDFLSSGLPSGALGRTNHSYYRGPVRGGAYI
PQPYIRDSGSLLYAPRDSTHHHVYRQGGRHGSIAAWSDSSQVSSPERDGTFTMVDSGHGD
SMSVSTVEVPMTPHSHQAPLLPMHLYPLSQPMRVAFTTSRTANFAPGNLDQPIVFDQLHS
NLGEAYDTHIGRFTCPVNGTYVFIFHILKLAINVPLYVNLMRNEEVMVSAYANDGAPDHE
TASNHAILPLFQGDQVWLRLHRGAIYGSTWKYSTFSGFLLYQD
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaactttacaccttgcctgttctggatgctcctcatctacctgagcattcagtg
gaggaggatgaggaggatgagggccagcagatgaaggatgaggtgccggggatgcagcag
gtcagcctggaggtgtccactgcataccacggctatgaaacctatattgaagatggcctc
atctgtctgaaacacaagatcaggaacctggagaagaagaagctgaagctgaaggagtac
aagaagaggcttatccagggcgaggagctgaacaaagatcagaaggcagctgtggagaag
ttcgaggaggtgcttcataacctggattttgcccgggagctgcacaaaactttggatggc
ctgactcagaatctgctgaaagcccagaagaaggttgttaaaaaagatcaggtagagaga
gtggaggccgagaggaggcgcctggctatggtcctgaaaatccactacctcctgggtaat
atgcagcaggagcacatccagaaggacttgatgactggaaacaaccaggcaccacacatc
cccagccagaagctgcacagcctgaaccagcttgccgccatgctgggagtccaaagagac
aacggactgagcctagatgagcagatgcagaaggctgcactggtctacatggaccttctg
gagggaaaggaccaaccagtggctggatccacttataagctgttgaaagaggagattacc
agactgatggattgcaagtatttgagccgatttctgcctcaacccaacaagtctgcagag
ttgtttctgggcttaggaagccacagcacaagtggaacttccaaagagctttttcccaga
ctacccctgcaggatgtgaaggggcctaacaatccaaactggaaggatgatttccagtcc
atgaaggagcaggagcctcctgacagctgggatgctgaaacctctgatggaccctcatct
ccactaaccggtgtcccaaaaccttggagaggagctgctgtgctcatcccgaaggctgtc
cgagctgcatcaaagcagcgcactgtttccaaaccgagaaaagagaagaccaaaaaggaa
caaagcacaaagactatacttcaaatggaaatacctgtggaaatttttcaatccccacct
actttgcccaaagatcccatactaaggaaacggcaccttgaggagctcatgatgaagatc
catggctctttcagctttatgcaggactctttattagatggagagaattctaccagcagt
atacccagaccgaagagacttccatctggggcttcttctcctttggcttatggtggtcta
agaagtcctgttgatattctacccaaagtgatgagttccaccccactgcctactagactg
aaagaacgcaaggccagtgtgtcaagtgaggaacaatgtcttgaacgtgctgacttgcag
ctttcctcaaaggacctacctcattctctgcaggcgtctcttcaattggacggcagaaaa
caattttcctccccacctctttacagccgagaactaccggatgcttctgcagacgagagt
aactcttctggtatgtcagttaatggcccatgtaaacactcccccactaatggagtaaca
tcgtccaattctacaccccctaagagagagactttttccacacctcccactagacgacct
ctgacctctgcacagttcggaaacattcaggcggtctttaaggtgggaccaggactacct
caggttggggagctggactacaagtcgaaggttgatttctctgagccacagtacagcatt
gctagcacccaaacaccgtctgagtttgctcccacagacgacgagcctcagctggtgtac
cagccagagtacatgctggataatggagatgacttcctgtcctctggcctcccaagtggg
gctttgggtcgaaccaaccactcttactacaggggacctgtaagaggaggagcctatatc
ccccagccatatatcagagactctggttctctcctctatgcgccaagagattcaacacac
caccatgtgtacagacaaggagggagacacgggtcgattgcagcttggagtgattcttct
caggtcagcagtccagaacgggatgggacctttaccatggtggattctggtcatggagac
tcaatgtctgtgtcaaccgtggaggtcccaatgactccccacagccaccaagccccctta
cttcctatgcacctgtacccactctcccagccgatgagagtggcgttcaccacctctcgt
actgctaactttgctccgggcaaccttgaccagcccatcgtgtttgaccagctgcacagc
aacctgggggaggcgtatgacacccacattggaaggttcacctgtccagtgaatggaaca
tatgtgttcatcttccacatcctgaagctggcgatcaacgttcccctctatgttaacctc
atgcgcaatgaagaagtgatggtgtctgcctacgccaacgatggcgccccggatcacgag
actgccagtaaccatgcaattctgccacttttccaaggggaccaggtgtggctgcggttg
caccgtggagccatctatggcagcacgtggaagtacagcaccttctccggctttctgctc
taccaggactaa
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